GenomeNet

Database: Pfam
Entry: DUF5435
LinkDB: DUF5435
Original site: DUF5435 
#=GF ID   DUF5435
#=GF AC   PF17503.3
#=GF DE   Family of unknown function (DUF5435)
#=GF AU   El-Gebali S;0000-0003-1378-5495
#=GF SE   PRODOM:PD037113
#=GF GA   27.00 27.00;
#=GF TC   32.10 83.90;
#=GF NC   24.30 24.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR035262;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a family of unknown function found in Varicellovirus.
#=GF SQ   4
#=GS VG02_EHV1B/1-205         AC P28979.1
#=GS I1V8B5_9ALPH/1-204       AC I1V8B5.1
#=GS A0A288CG36_EHV4/1-208    AC A0A288CG36.1
#=GS A0A077B7H1_9ALPH/27-226  AC A0A077B7H1.1
VG02_EHV1B/1-205                    .........MDPAWRRRIHVSNPTTINVEPRPRRESLRRQLLSQLFFKKMSQLFKKKRQT.RPSTVWYGR.VAFPPSAWQGPARVSPYGYESDSENEEYTRISSATSSNVLTDSPTTTQDDPTGRCTDAYAESPAVLHLDDVTRNHRGAAALPS-EVYLDGFCDQHK--DPSGRMGPIKRRLYSKTFCRKFAAINIILLMLQILVLIGIVYRGFGKECM..
I1V8B5_9ALPH/1-204                  .........MDSKWRRRIHVSSPTTINVEPRPRRESLRKQLLSQLFFKKMSQLFKKKRHA.RPSTVWYDK.VAFPPSAWQGPARVSPYGYESDSENEEYTRINSTTFSNELPAS-PPTQDDPTDRCTDAYAESPAVLHLDNVSRNHSEAASP-PSEVYLDGFCDQHK--DPSGHMRPIKRRLYSKTFCGQFAAIHIILLMLQILVLIGIVYRGFGKGCM..
A0A288CG36_EHV4/1-208               .........MDQKRRRRIHALRPTTINAEVRPRRESLRRQLLSQLFFKRMAQLFKKKRQK.KPSTVWYDK.VAFPPSAWQGPARVSPYGYESDSENEEYTCISSASLNNVLTESLTPTQNATANNCSNTYSESPAVLHLERIPRDLRETDALDSEEVYLDGFVTTRSRSNSFENMGPVKRRLYSKKFCRQFAAINIILLMLNILVLTGIVYRGFGKGCL..
A0A077B7H1_9ALPH/27-226             gavrrsglk----------ASDLGASNARPRPQSQRPLQRLLAVPAIGGMAKFFRKKRGGaRSRSVWYEGgTAFPPSAWKGPARTSPYGYESDSDADEASRLRQGDGDR----SRLASGAAGVRRELGVEAGSPAVLPLNGSRR----RDPT-PADVYLDGFPTLREQEELQLAPRPVQKSGGAGACCQRLVIANVVILLFQVLVLTGTIFYSLHHG--hc
#=GC seq_cons                       .........MD.thRRRIHsSsPTTINsEPRPRRESLR+QLLSQLFFK+MuQLFKKKRps.RPSTVWY-+.VAFPPSAWQGPARVSPYGYESDSENEEYTRIsSuohsN.LstS.ssTQsssssRCossYAESPAVLHL-slsRshptssuh.stEVYLDGFssp+c..-sptpMtPlKRRLYSKsFCppFAAINIILLMLQILVLhGIVYRGFGKGCh..
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