GenomeNet

Database: Pfam
Entry: GA-like
LinkDB: GA-like
Original site: GA-like 
#=GF ID   GA-like
#=GF AC   PF17573.6
#=GF DE   GA-like domain
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Bateman A
#=GF GA   25.00 10.00;
#=GF TC   25.30 10.40;
#=GF NC   24.90 9.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0598
#=GF DR   INTERPRO; IPR035152;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is found in bacterial cell surface proteins. It is
#=GF CC   related to the GA domain that forms a three helix bundle.
#=GF SQ   44
#=GS H3NG64_9LACT/1095-1143    AC H3NG64.1
#=GS A0A133YJ97_9FIRM/449-498  AC A0A133YJ97.1
#=GS K9EXL1_9LACT/41-90        AC K9EXL1.1
#=GS A0A133YMC1_9FIRM/360-409  AC A0A133YMC1.1
#=GS G5JZF8_9STRE/389-437      AC G5JZF8.1
#=GS K9EAV4_9LACT/142-191      AC K9EAV4.1
#=GS K9E8I0_9LACT/311-360      AC K9E8I0.1
#=GS G5JZF8_9STRE/340-388      AC G5JZF8.1
#=GS K9EAV1_9LACT/290-339      AC K9EAV1.1
#=GS K9EPZ2_9LACT/336-385      AC K9EPZ2.1
#=GS K9E8I0_9LACT/56-105       AC K9E8I0.1
#=GS B0S4H6_FINM2/172-221      AC B0S4H6.1
#=GS B0S4H6_FINM2/86-135       AC B0S4H6.1
#=GS C2BHY5_9FIRM/10-54        AC C2BHY5.1
#=GS K9EAV4_9LACT/424-473      AC K9EAV4.1
#=GS A0A1Q9JJH1_9FIRM/133-158  AC A0A1Q9JJH1.1
#=GS H3NG65_9LACT/420-468      AC H3NG65.1
#=GS K9E8I0_9LACT/203-251      AC K9E8I0.1
#=GS A0A133YMC1_9FIRM/310-359  AC A0A133YMC1.1
#=GS K9EPZ2_9LACT/90-145       AC K9EPZ2.1
#=GS K9EPZ2_9LACT/1-27         AC K9EPZ2.1
#=GS A0A133ZU39_9BACL/111-160  AC A0A133ZU39.1
#=GS K9E8M0_9LACT/157-206      AC K9E8M0.1
#=GS K9EPZ2_9LACT/240-289      AC K9EPZ2.1
#=GS A0A133YMC1_9FIRM/13-62    AC A0A133YMC1.1
#=GS K9E8I0_9LACT/122-171      AC K9E8I0.1
#=GS K9EPZ2_9LACT/35-84        AC K9EPZ2.1
#=GS C7HTJ5_9FIRM/1-26         AC C7HTJ5.1
#=GS K9E8M0_9LACT/72-121       AC K9E8M0.1
#=GS K9EPZ2_9LACT/293-337      AC K9EPZ2.1
#=GS G5JZF8_9STRE/445-493      AC G5JZF8.1
#=GS A0A1Q9JJH1_9FIRM/66-89    AC A0A1Q9JJH1.1
#=GS G5KGV3_9STRE/218-266      AC G5KGV3.1
#=GS A0A133YJ97_9FIRM/57-106   AC A0A133YJ97.1
#=GS K9E8M0_9LACT/244-293      AC K9E8M0.1
#=GS A0A133YMC1_9FIRM/119-168  AC A0A133YMC1.1
#=GS B0S3H9_FINM2/382-431      AC B0S3H9.1
#=GS G5JZF8_9STRE/239-290      AC G5JZF8.1
#=GS A0A133YJ97_9FIRM/579-628  AC A0A133YJ97.1
#=GS G5JZF8_9STRE/189-237      AC G5JZF8.1
#=GS K9EAV4_9LACT/58-106       AC K9EAV4.1
#=GS A0A133YJ97_9FIRM/191-240  AC A0A133YJ97.1
#=GS C7HW75_9FIRM/1671-1720    AC C7HW75.1
#=GS G5JZF8_9STRE/291-339      AC G5JZF8.1
H3NG64_9LACT/1095-1143               .......dd--FKAEFLAAYKKRTIEELKA...KGFT.N...KF...VFN...IIQRANTIEGIDSVVAE--l.....
A0A133YJ97_9FIRM/449-498             ........k-AEEKESLKKAKDDAIDRLDD...YGIK.D...NE...SIS...KINSCNSVEQVNKVKKELI......
K9EXL1_9LACT/41-90                   ........q-EQKAQELQAAKEAAIAEVQT...AGFT.D...EK...YAG...WINAQETVQDVNAVKREIL......
A0A133YMC1_9FIRM/360-409             ........s-EKKAKELQEAKEKAIAELKE...ASIE.D...EE...SIA...KINACKSIEEVNEVKEDLL......
G5JZF8_9STRE/389-437                 .......as--MKALALDEAKKAAKAELAS...AGV-.S...DF...YIN...KIDGANTVEGVNALKDSIL......
K9EAV4_9LACT/142-191                 ......ava---AEAELQAAKESAIAEVKA...AGFT.D...QK...YVD...WINAQETVQDVNGVKREIL......
K9E8I0_9LACT/311-360                 .......vk--QQEEGLRNAKAEAIAEIQA...AGYT.E...QE...YAD...VINAQSTVRFVEDAKNEIL......
G5JZF8_9STRE/340-388                 .......as--MKALALDEAKKAAKAELAS...AGV-.S...DF...YIN...KIDGANTVEGVNALKDATL......
K9EAV1_9LACT/290-339                 ..laeqylp-------LFKAQDSALEALKS...LGIT.S...ER...LFD...EIREATSVEEVEQLATSIL......
K9EPZ2_9LACT/336-385                 ........e-IQSERALQLAKGEAIVELEA...DGET.S...EA...DRQ...RIHQADSIEEVERVKEYIL......
K9E8I0_9LACT/56-105                  ........t-EELQEALQTEKESAKAELQE...AGAT.S...PR...LAQ...AIDAADSVEEVEQLKNDFL......
B0S4H6_FINM2/172-221                 ........k-LFKQEELKKAKEQAIAELKA...NGIT.S...KF...FVD...RINAGKTVEGVKALKEELI......
B0S4H6_FINM2/86-135                  ........v-KKDSKALEEAKKQAIADLKA...NGIT.S...KL...FLD...KIESAKTVEGVKSLKAELI......
C2BHY5_9FIRM/10-54                   .......qa--DKDEALKKAKEAAIKELAA...AGIT.D...DA...STG...KINAASTVEEVERI-----......
K9EAV4_9LACT/424-473                 ......eev---YERELQATKEAAIAELQG...IYIK.D...EE...LFG...RIQDAERIEEVKKLRSDA-i.....
A0A1Q9JJH1_9FIRM/133-158             ......aag---------------------...----.-...-K...YVD...KIRDAATRENVRELRDEFL......
H3NG65_9LACT/420-468                 .......dd--FKAEWLAAYKERTIEELKA...KGFT.N...KF...VFN...IIQRANTIEGIDSVVAE--l.....
K9E8I0_9LACT/203-251                 .......ae---AAYELEQEQESAIAELQG...IGIE.N...DT...LFG...LIRDADSVEEVKRVKSDII......
A0A133YMC1_9FIRM/310-359             ........a-EKKAKELQETKEKAIAELKE...ASIE.D...KE...SIA...KINACKSVEEVNKVKENLL......
K9EPZ2_9LACT/90-145                  ......qrq---EAVALEVGKTAAIADLEDllgTSVT.E...DL...TDDekaLINDAKSLEEVNKVKAEII......
K9EPZ2_9LACT/1-27                    ........m---------------------...---T.S...DL...WFE...LINKANTVEGVESLKNDIL......
A0A133ZU39_9BACL/111-160             .......eh--NDAQKLAEAKAEAKEFLKK...HGVT.K...EQ...YFY...KIDSAKDLQEVEKWKTEIL......
K9E8M0_9LACT/157-206                 ........e-DSEEADLEAAKETAKAELQA...AGAT.S...PK...LAE...YIDFADSVEEVERLKNDFL......
K9EPZ2_9LACT/240-289                 .......ll--REAQALQQAKEKSYEQLNA...AGIT.S...KG...LYE...RIANANSVEEVEPLTEVF-l.....
A0A133YMC1_9FIRM/13-62               .......ee--VLKKSLKEAKEKAKEELRK...EGIT.S...KL...FLD...KIDLAKTKEGVDALKAEII......
K9E8I0_9LACT/122-171                 .......td--EVDEELEAAKEAAIAEVQA...AGFT.D...EK...YAG...WINAQETEQDVNGIKRDIL......
K9EPZ2_9LACT/35-84                   ........e-QAEAEALETAKAEAIEELTA...DGVT.S...DL...WFE...LINKANTIEGVGSLKNDIL......
C7HTJ5_9FIRM/1-26                    .......tg---------------------...----.-...QI...YFD...QINKAKTIEGVEALKNEIL......
K9E8M0_9LACT/72-121                  ........e-DSEEADLEAAKESAKAELQA...AGAT.S...PK...LAE...YIDFADTVEEVERLKNDFL......
K9EPZ2_9LACT/293-337                 ......rqq---LAQDLAVAKAQAIEELDA...NEAE.S...--...--A...RINNANSAEELAQVIEE--i.....
G5JZF8_9STRE/445-493                 ........d-KPEVDALAAAKEAAKAELAA...AGV-.S...DF...YIN...KIDGANTVEGVKALKDAIL......
A0A1Q9JJH1_9FIRM/66-89               .......vr---------------------...----.-...-K...YIR...RIDKARTKEGAMAAKKA--f.....
G5KGV3_9STRE/218-266                 ........k-TVKDYALEDAKSLAKSALKS...EGA-.S...DF...YIN...KIDSANTVEGVNSLKDSII......
A0A133YJ97_9FIRM/57-106              ........t-ITITDELQKAKDDAIETLDD...NGIK.D...NE...SIS...KINACTTVEQVRKTKKEII......
K9E8M0_9LACT/244-293                 ........e-DEEAQALQAAKESAKAELQA...AGAT.S...PK...LAE...YIDSADSVEEVDRLKNDFL......
A0A133YMC1_9FIRM/119-168             ......rkl---SEKSLKEAKEKAKEELRK...EGIT.S...KL...FLD...KIDLAKTKEGVDALKAEII......
B0S3H9_FINM2/382-431                 ........d-IAKEKALKEAKEKAVEELKN...NGIT.S...EK...YIE...QINKAKTVEGVNALKDEII......
G5JZF8_9STRE/239-290                 yvkasalea------AKEAAKEAAKAELAA...AGA-.S...DF...YIN...KIDTANTVDGVNALKDATL......
A0A133YJ97_9FIRM/579-628             ........l-ETKLNELKEVKKEAKEELRK...EGIT.S...KL...FLD...KIDLAKTKEGVDALKTEII......
G5JZF8_9STRE/189-237                 ........a-INSKADLDKAKADAKAALAA...AGV-.S...DF...YVS...KIDGAKTLAGVEALKETTL......
K9EAV4_9LACT/58-106                  ......eql----QAALETEKEFAIAEVQA...AGFT.D...QK...YVD...WINAQETVQDVNGVKREIL......
A0A133YJ97_9FIRM/191-240             .......ll--KKDDELKEAKEKAKKELKE...NGID.T...EF...FLK...RIDSASKKELVEELTKQII......
C7HW75_9FIRM/1671-1720               ........s-VEKYEKLKKAQEDAIKELND...AGIK.E...DL...YLE...KIRKAKTIEEVEKIKEELL......
G5JZF8_9STRE/291-339                 ........a-SMKASALDEAKKAAKAELAS...AGV-.S...DF...YIN...KIDGANTVEGVNALKDATL......
#=GC seq_cons                        ........p...ptptLptAKcpAhtELps...sGhp.s...ch...hhs...cIssApTlEtVctlKs-ll......
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