GenomeNet

Database: Pfam
Entry: MbeD_MobD
LinkDB: MbeD_MobD
Original site: MbeD_MobD 
#=GF ID   MbeD_MobD
#=GF AC   PF04899.15
#=GF DE   MbeD/MobD like 
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF SE   Pfam-B_5673 (release 7.6)
#=GF GA   21.60 21.60;
#=GF TC   21.60 21.60;
#=GF NC   21.50 21.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 61295632 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   2671664
#=GF RT   Characterization of the ColE1 mobilization region and its
#=GF RT   protein products. 
#=GF RA   Boyd AC, Archer JA, Sherratt DJ; 
#=GF RL   Mol Gen Genet 1989;217:488-498.
#=GF DR   INTERPRO; IPR006983;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   The MbeD and MobD proteins are plasmid encoded, and are involved
#=GF CC   in the plasmids mobilisation and transfer in the presence of
#=GF CC   conjugative plasmids [1].
#=GF SQ   45
#=GS A0A2V1H4S0_9GAMM/3-101      AC A0A2V1H4S0.1
#=GS A0A4R5JC81_9FIRM/1-70       AC A0A4R5JC81.1
#=GS A0A4Q4W033_9PEZI/146-210    AC A0A4Q4W033.1
#=GS A0A4Q4Z9G0_9PEZI/143-208    AC A0A4Q4Z9G0.1
#=GS A0A083ZVR7_9GAMM/3-71       AC A0A083ZVR7.1
#=GS C4K5A7_HAMD5/1-69           AC C4K5A7.1
#=GS A0A663ARX6_9ENTR/1-70       AC A0A663ARX6.1
#=GS A0A5S5D7S6_9SPHI/134-184    AC A0A5S5D7S6.1
#=GS A0A1W6B3V0_9GAMM/1-70       AC A0A1W6B3V0.1
#=GS A0A085U5X9_YERRU/3-100      AC A0A085U5X9.1
#=GS I1YHR8_METFJ/34-104         AC I1YHR8.1
#=GS A0A1Y0H6Q5_9BACT/104-168    AC A0A1Y0H6Q5.1
#=GS A0A654H9V8_9CEST/1561-1632  AC A0A654H9V8.1
#=GS A0A663AJX6_9ENTR/1-77       AC A0A663AJX6.1
#=GS A0A6L6IPT6_9ESCH/1-77       AC A0A6L6IPT6.1
#=GS A0A5E4R236_9NEOP/48-122     AC A0A5E4R236.1
#=GS A0A1T4PRL8_9FIRM/1-64       AC A0A1T4PRL8.1
#=GS D4E2L4_SEROD/3-69           AC D4E2L4.1
#=GS A0A5E4QXY3_9NEOP/48-122     AC A0A5E4QXY3.1
#=GS A0A421DL40_9GAMM/3-71       AC A0A421DL40.1
#=GS A0A4R3Z1E7_9GAMM/3-71       AC A0A4R3Z1E7.1
#=GS C3XU21_BRAFL/25-69          AC C3XU21.1
#=GS F4P0J2_BATDJ/14-82          AC F4P0J2.1
#=GS A0A6P4ZCE0_BRABE/75-124     AC A0A6P4ZCE0.1
#=GS A0A429DPW0_9ACTN/1-70       AC A0A429DPW0.1
#=GS A0A2G4SZI8_RHIZD/15-71      AC A0A2G4SZI8.1
#=GS A0A4Y6UAR7_9PROT/47-92      AC A0A4Y6UAR7.1
#=GS A0A0B1PFF2_9BILA/1216-1284  AC A0A0B1PFF2.1
#=GS A0A1C7HCE1_9BURK/34-99      AC A0A1C7HCE1.1
#=GS I3ECC2_BACMM/2-53           AC I3ECC2.1
#=GS A0A5Q4SNF9_9ACTN/33-88      AC A0A5Q4SNF9.1
#=GS R1ET21_BOTPV/281-352        AC R1ET21.1
#=GS A0A364N391_9PLEO/126-181    AC A0A364N391.1
#=GS W0L9S5_9GAMM/3-68           AC W0L9S5.1
#=GS A0A0D1Y747_ANEMI/1-73       AC A0A0D1Y747.1
#=GS A0A2X4T351_SALER/1-70       AC A0A2X4T351.1
#=GS E0SKU0_DICD3/3-71           AC E0SKU0.1
#=GS A0A194AI29_9DELT/26-80      AC A0A194AI29.1
#=GS A0A086GB03_9GAMM/3-69       AC A0A086GB03.1
#=GS A0A1A6KWG7_9VIBR/73-110     AC A0A1A6KWG7.1
#=GS F5XF23_MICPN/36-107         AC F5XF23.1
#=GS A0A197K275_9FUNG/490-581    AC A0A197K275.1
#=GS A0A0U5ARY9_9BACL/1-73       AC A0A0U5ARY9.1
#=GS A0A250B430_9GAMM/3-95       AC A0A250B430.1
#=GS A0A240CB79_SERFI/3-77       AC A0A240CB79.1
A0A2V1H4S0_9GAMM/3-101                 .........................................MRELEIHFH..HAMNELQASFEKQHREWQHSYQAL.QQQ...LEEAKQREI...........ILRMQNEQLVRKL------------stansvpeqhvlikqikilsahldalaqdaanfncqvnhqq
A0A4R5JC81_9FIRM/1-70                  .........................................MTELEKQLL..SALEQLQQDYSKRLDEWESAFGEW.RKM...SGLMQREHA...........ALSERVTSLSQQVERLSGQLQRLSR.........................................
A0A4Q4W033_9PEZI/146-210               ....................................aervr---------..-ALEADLRDARDKLLSVEKGYVQL.RAL...LGMTQRENG...........DLSLRVAEAERQRDALGEQLER---avd......................................
A0A4Q4Z9G0_9PEZI/143-208               ...................................stervr---------..-ALEAELREARDKLLSVEKGYVQL.RAL...LGMTQKENG...........DLSLRVTEVERQRDALKEQLEK---aae......................................
A0A083ZVR7_9GAMM/3-71                  .........................................MRELELHFH..HAMNELQASFEKQHREWQHSYQAL.QQQ...LEEAKQREI...........ILRMQNEQLVRKL------------stansvpeqhv..............................
C4K5A7_HAMD5/1-69                      .........................................MTELENHLL..NGLLNLERKFTNQQKVLSEAQNEL.QKM...LAITSAENT...........QLQKQVNNLSNQLMELSK-------lyktnr...................................
A0A663ARX6_9ENTR/1-70                  .........................................MTELEKQLL..SALEQLQQDYSRRLDEWESAFEEW.RKM...SGLMQRENA...........ALSERVSGLSRQVQSLSEQLRRLS-t........................................
A0A5S5D7S6_9SPHI/134-184               .................................kddvsglr---------..------------------TALNEL.KMR...NELLQRENA...........NLSDQVSSTGKQVDVLSQENSRL--kd.......................................
A0A1W6B3V0_9GAMM/1-70                  .........................................MSELEKQLL..SALEQLQQDYSKRLDEWENAFAEW.RTM...SGLMQRENA...........ALSERVTGLSRQVQSLSEQLRRLS-s........................................
A0A085U5X9_YERRU/3-100                 .........................................MRELEVKFL..SAMNELQSTFEKQHQVWQESYEAL.QHA...LEQSLAREA...........TLKAQNDLLQKKL------------snanslpeqhqlvkqikmlgahldalakdaasfnrhlntt.
I1YHR8_METFJ/34-104                    .........................vaplaqqimhatpqpt---------..--------DPSQQFSSLQSAFTHL.TDQ...IGHTDRDVAra.......lrMLDEKLNILSSQVQHLLRPV-----neq......................................
A0A1Y0H6Q5_9BACT/104-168               .......................................ns------DLR..TALEALKRDVD-GMKAWRSDIENF.KRL...STEFEKELA...........SLGVDVDKLQSDVASLDERVRRL--es.......................................
A0A654H9V8_9CEST/1561-1632             .................................mvdveran------GLA..SQLEKKQKNFDRTLGEWQAKYAES.QAE...LENAQRESR...........GLSTDVFRLKAQMEEANDQMEAL--rr.......................................
A0A663AJX6_9ENTR/1-77                  .........................................MTETEKLLL..SALERLQDDYETRQQAWQASYDSL.QTM...FTTTSAALMrsd....qacqHLSGQVESLRQQVMSLTEAVSRLTR.........................................
A0A6L6IPT6_9ESCH/1-77                  .........................................MTEMEKQLL..SALESLQTGYEQQQQAWQDSYSSL.QHM...FEATSQALAhsd....rvcqHLSSQVDSLRAQVESLSRSVSRLM-r........................................
A0A5E4R236_9NEOP/48-122                ........................................c-TILEKHLIqeSSIPTLGAEYEHKLKETLSALRNP.RSLnneIERLTQENM...........QLSAQRMQLKQQCEDMNGRLAR---ara......................................
A0A1T4PRL8_9FIRM/1-64                  ......................................mly------QIL..HAVENLHSTFNQRFDRLEQRMDNLeQRM...NGLEQRMD-...........NLEQRVNGLEQRVDGI---------dtrqge...................................
D4E2L4_SEROD/3-69                      .........................................MRELEIQFQ..NAMNELQASFEKQHREWQQRYHAL.QQQ...LLEAQQREA...........ALRAQNEQLARKLS-----------tassvpeq.................................
A0A5E4QXY3_9NEOP/48-122                ........................................c-TILEKHLIqeSSIPTLGAEYEHKLKETLSALRNP.RSLnneIERLTQENM...........QLSAQRMQLKQQCEDMNGRLAR---ara......................................
A0A421DL40_9GAMM/3-71                  .......................................ve--ELETRLN..GAFQELERSVQQQQQIWRRDYQQL.QQQ...LAQARQHEA...........QLCEQIEQLVTQLNAMDS-------sparnp...................................
A0A4R3Z1E7_9GAMM/3-71                  ........................................l-QELESRLD..HAFTELEQSFVQHHRYSQESYQAL.QRQ...LELSLQREA...........KLRENNAYLVSQLNNLDSSPD----rnp......................................
C3XU21_BRAFL/25-69                     ....................................vasvg---------..---------------------SDL.QYQ...FERMAREKA...........QLSVDYDNVVQQHADLSEEVERLS-i........................................
F4P0J2_BATDJ/14-82                     .......................................yq--DLDTQLR..SGIDLIQDAYTRQAAALKHEVAHW.KHT...ASHHKDQNS...........ALDAQVAALTRRVAELERAL-----stqa.....................................
A0A6P4ZCE0_BRABE/75-124                ...............................qfkameergs---------..---------------------SDL.QYQ...FERMAREKA...........QLSVDHDNLVQQYADLSEEVERLS-i........................................
A0A429DPW0_9ACTN/1-70                  .........................................MTELERHLL..NALEQLQQDYMQRLNEWESAFVEL.QKM...FSLTQRDNA...........MLNERVMKLSQQVQHLSERTERLSQ.........................................
A0A2G4SZI8_RHIZD/15-71                 ..........................niafmiqqlstsvny---------..-------------------GFNDM.RSN...FEVMLQENK...........SLKEEVVLLRQQVTVLAEEVGT---lka......................................
A0A4Y6UAR7_9PROT/47-92                 ......................................vrr---------..------------------DEFDAL.AEM...AARCRRSEE...........ELTARVAQLEKQVQSLSDQVSALS-a........................................
A0A0B1PFF2_9BILA/1216-1284             ...................................eldkan------ALN..TALERKQRMYEKATDEWKQKCDEI.TAD...LETSQRENR...........ALSTEVFKLRSMVEQ----------avdkeeaar................................
A0A1C7HCE1_9BURK/34-99                 ..................................knarsqv---------..SQLTQTIQEYETRQKDWNIAMADL.RKS...ESIARSDSE...........RLRQRVNSLEKRA------------ktsesriaiq...............................
I3ECC2_BACMM/2-53                      ...................dyyyrqqgtgfpqpgfqgwqdi---------..------------------------.---...----NRRLD...........RLDRRVDRLSQQVDQINRRLDRI--er.......................................
A0A5Q4SNF9_9ACTN/33-88                 ...................................qatsgn---------..----------ERQRVAWGDCWKDW.R-V...LKVSEKCLT...........ALSTFVGTLSTNVGNLSTQTNRW--lp.......................................
R1ET21_BOTPV/281-352                   ..................................sverele------DLK..QAHGKLQDDYQAAHRQWESEVMGL.RRN...VSSGESERS...........ALQRKIEDLISQNEELARAVA----yhrrl....................................
A0A364N391_9PLEO/126-181               ......................................arr---------..--------DRATRERDWEGASREN.KSM...SAFERDSNA...........ALQQQITQLAEQVKALQQLVQ----ansm.....................................
W0L9S5_9GAMM/3-68                      .........................................MRELDTQFQ..NAMNELQASFEKQHREWQQHFQAL.QQQ...LEEAKQREA...........VLQRQNEQLIHQLST----------assipe...................................
A0A0D1Y747_ANEMI/1-73                  .........................................MEEILKQIL..AEMQDMKKEMNQRFDSVDERFTEL.NHK...LEVIREQTAa........nsEIHSPVADVQKQVDDLATDVK----likr.....................................
A0A2X4T351_SALER/1-70                  .........................................MTELETQLL..SALEQLQQDYSQRLDEWESAFGEL.RTM...CGLMQEDNE...........RLSGQVTRLSQQVERLSVQLSRLSR.........................................
E0SKU0_DICD3/3-71                      .......................................ie--ELEARLD..SALQALEDSVSRQQQIWQRDYQQL.HLQ...LAQARQREA...........DLCARINELVTRVNMMDESPER---np.......................................
A0A194AI29_9DELT/26-80                 .....................................stll---------..----------EQRLQQIESRQEES.RTM...SEQLRQDNA...........LLAERVDTLSLEVVDLSMELQRL--qa.......................................
A0A086GB03_9GAMM/3-69                  .........................................MRELEIQFQ..NAMNELQSSFERQHREWQQSYQAL.QQL...LEEAKQREA...........ALRAQNEQLARKLS-----------tassvpeq.................................
A0A1A6KWG7_9VIBR/73-110                ...................................rgwgmn---------..------------------------.---...--QIKQEQS...........DLHHDVSQLSQQVQDLTEQVAELK-q........................................
F5XF23_MICPN/36-107                    .............................avesiknlvlat---------..------QEKATKQLTEWQGSFAGL.QSK...GSEQAKHAGef.......vrALPEQVKALPEQLKTLPETT-----kariee...................................
A0A197K275_9FUNG/490-581               srweaevaalranmqtmeiergessllrashdhltesfsvc---------..----------SDRLKDIQTAYNNV.QRI...CESRQEEAN...........QYRTKCESLSDQLRYLSDEVEELN-r........................................
A0A0U5ARY9_9BACL/1-73                  .........................................MEDMLKQIL..VEMQSMKQEMNQRFDHVDKQFDEL.NHK...LEVIREQTAs........nsEMYSPVADVQKQVDELSTDVK----likr.....................................
A0A250B430_9GAMM/3-95                  .........................................MRELDIRFQ..HAMNELQASFEKQHREWQQSYQAL.QQL...LEEAKQREA...........ALRAQNEQLRRKL------------stassvpeqhalvkqikmlgahldalakdaatfnh......
A0A240CB79_SERFI/3-77                  .........................................MRELEIQFQ..NAMNELQASFERQHREWQHSYQAL.QQL...LEEAKQREAallaeakqreaA-------LRAQNEQLARKLS----tassv....................................
#=GC seq_cons                          ...............................................th...puhpphptphppphpphppsappL.pph...hpttppcpu...........tLptplspLppQlppLsppht....t........................................
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