#=GF ID Rep_2
#=GF AC PF01719.19
#=GF DE Plasmid replication protein
#=GF AU Bashton M;0000-0002-6847-1525
#=GF AU Bateman A;0000-0002-6982-4660
#=GF SE Pfam-B_1901 (release 4.1)
#=GF GA 25.00 25.00;
#=GF TC 25.00 28.00;
#=GF NC 24.10 24.10;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 57096847 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Family
#=GF CL CL0169
#=GF RN [1]
#=GF RM 1904536
#=GF RT Genetic analysis of a lactococcal plasmid replicon.
#=GF RA Xu FF, Pearce LE, Yu PL;
#=GF RL Mol Gen Genet 1991;227:33-39.
#=GF RN [2]
#=GF RM 2695401
#=GF RT Characterization of a cryptic plasmid from Lactobacillus
#=GF RT plantarum.
#=GF RA Bates EE, Gilbert HJ;
#=GF RL Gene 1989;85:253-258.
#=GF DR INTERPRO; IPR002631;
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF CC This family consists of various bacterial plasmid replication
#=GF CC (Rep) proteins. These proteins are essential for replication of
#=GF CC plasmids, the Rep proteins are topoisomerases that nick the
#=GF CC positive stand at the plus origin of replication and also at the
#=GF CC single-strand conversion sequence [2].
#=GF SQ 167
#=GS A0A087EKU7_9BIFI/5-190 AC A0A087EKU7.1
#=GS Q5FMZ1_LACAC/1-188 AC Q5FMZ1.1
#=GS M4YZM6_STREQ/1-184 AC M4YZM6.1
#=GS A0A380KA39_9STRE/1-184 AC A0A380KA39.1
#=GS C5C9K3_MICLC/48-227 AC C5C9K3.1
#=GS A0A2A3Z719_9MICO/52-216 AC A0A2A3Z719.1
#=GS A0A2N6PK40_9MICO/52-228 AC A0A2N6PK40.1
#=GS K9B461_9MICO/49-225 AC K9B461.1
#=GS A0A1L8RAU2_9ENTE/14-233 AC A0A1L8RAU2.1
#=GS A0A3A9EUV4_9BACT/14-182 AC A0A3A9EUV4.1
#=GS A0A542X8H2_9MICO/56-220 AC A0A542X8H2.1
#=GS Q6LWI0_LACPL/1-205 AC Q6LWI0.1
#=GS A0A3N0AQY3_9ACTN/15-202 AC A0A3N0AQY3.1
#=GS R5LPG3_9MOLU/1-183 AC R5LPG3.1
#=GS A0A3A9IAX2_9FIRM/36-175 AC A0A3A9IAX2.1
#=GS A0A2S6CPC3_9CYAN/5-44 AC A0A2S6CPC3.1
#=GS A0A0R1MG53_9LACO/1-205 AC A0A0R1MG53.1
#=GS A0A5N5RLH1_9BIFI/5-190 AC A0A5N5RLH1.1
#=GS A0A2R5HHD4_9LACT/4-187 AC A0A2R5HHD4.1
#=GS A0A1M7A6Q2_9FIRM/48-195 AC A0A1M7A6Q2.1
#=GS A0A430AL86_9ENTE/4-215 AC A0A430AL86.1
#=GS K8E7B8_CARML/2-204 AC K8E7B8.2
#=GS U2B2M5_9CLOT/28-187 AC U2B2M5.1
#=GS A0A437SV55_9LACO/1-194 AC A0A437SV55.1
#=GS R5WLG4_9FIRM/8-220 AC R5WLG4.1
#=GS V7HUG0_9LACO/1-184 AC V7HUG0.1
#=GS I7JV74_9LACO/1-187 AC I7JV74.1
#=GS R6WAW3_9FIRM/1-183 AC R6WAW3.1
#=GS A0A3N0I6B1_9ACTN/1-88 AC A0A3N0I6B1.1
#=GS A0A0R1YN24_9LACO/1-50 AC A0A0R1YN24.1
#=GS K6DG47_9BACI/22-160 AC K6DG47.1
#=GS A0A2D1SX81_9BACL/12-187 AC A0A2D1SX81.1
#=GS A0A1G6DUZ0_9STRE/1-200 AC A0A1G6DUZ0.1
#=GS F5X3W2_STRPX/1-184 AC F5X3W2.1
#=GS F9Q5D8_STROR/1-184 AC F9Q5D8.1
#=GS A0A086ZH40_9BIFI/3-186 AC A0A086ZH40.1
#=GS A0A0R1YNB6_9LACO/19-59 AC A0A0R1YNB6.1
#=GS A0A0S9C5T3_9MICC/1-116 AC A0A0S9C5T3.1
#=GS R9KXH1_9FIRM/1-171 AC R9KXH1.1
#=GS U2TJ01_9ACTN/2-181 AC U2TJ01.1
#=GS R9M3T5_9FIRM/5-216 AC R9M3T5.1
#=GS A0A179ERG0_ENTTH/40-165 AC A0A179ERG0.1
#=GS H3NHH4_9LACT/1-91 AC H3NHH4.1
#=GS T0S4B5_LACLC/2-185 AC T0S4B5.1
#=GS A0A2S6CP50_9CYAN/1-184 AC A0A2S6CP50.1
#=GS A0A3P1V884_9ACTO/40-222 AC A0A3P1V884.1
#=GS A0A192H4M7_9LACO/20-204 AC A0A192H4M7.1
#=GS A0A4Q0VHJ7_9LACO/1-108 AC A0A4Q0VHJ7.1
#=GS A0A4S3B2U2_9ENTE/4-188 AC A0A4S3B2U2.1
#=GS R7HEM9_9MOLU/1-182 AC R7HEM9.1
#=GS A0A1T4WRJ9_9FIRM/4-179 AC A0A1T4WRJ9.1
#=GS K9ACT1_9STAP/1-134 AC K9ACT1.1
#=GS A0A429ZRW1_9ENTE/1-184 AC A0A429ZRW1.1
#=GS G9ZK09_9LACO/1-205 AC G9ZK09.1
#=GS H3NHH1_9LACT/9-103 AC H3NHH1.1
#=GS A0A0R1ZBS7_9LACO/17-176 AC A0A0R1ZBS7.1
#=GS F9PY17_9STRE/1-184 AC F9PY17.1
#=GS R5K9J9_9CLOT/4-189 AC R5K9J9.1
#=GS A0A022KV00_9MICO/45-180 AC A0A022KV00.1
#=GS A0A180ETQ8_9BACT/4-190 AC A0A180ETQ8.1
#=GS R5TRV5_9FIRM/28-211 AC R5TRV5.1
#=GS G8PF46_PEDCP/1-216 AC G8PF46.1
#=GS A0A430ARW5_9ENTE/1-184 AC A0A430ARW5.1
#=GS A0A147E9Q6_9MICC/52-228 AC A0A147E9Q6.1
#=GS A0A0C2FWG3_9BILA/1-167 AC A0A0C2FWG3.1
#=GS A0A2S6CP56_9CYAN/3-188 AC A0A2S6CP56.1
#=GS B9DU85_STRU0/1-184 AC B9DU85.1
#=GS W4EN49_9BACL/12-186 AC W4EN49.1
#=GS A0A3A5FBN9_9DELT/1-183 AC A0A3A5FBN9.1
#=GS A0A380Q0Z5_9FIRM/19-201 AC A0A380Q0Z5.1
#=GS K0YZC3_9ACTO/154-290 AC K0YZC3.1
#=GS A0A1T4YAB2_9DELT/7-223 AC A0A1T4YAB2.1
#=GS A0A0F3H7D5_STRPA/1-184 AC A0A0F3H7D5.1
#=GS U7VC90_9FUSO/1-185 AC U7VC90.1
#=GS A0A2A5RKV6_9LACT/3-193 AC A0A2A5RKV6.1
#=GS A3CR50_STRSV/1-184 AC A3CR50.1
#=GS A0A396S2G6_9BACI/3-187 AC A0A396S2G6.1
#=GS A0A2S6CP25_9CYAN/3-192 AC A0A2S6CP25.1
#=GS A0A288Q8B2_9LACT/1-189 AC A0A288Q8B2.1
#=GS A0A3S0V1Y1_9MICC/52-228 AC A0A3S0V1Y1.1
#=GS R9N3N9_9FIRM/7-193 AC R9N3N9.1
#=GS R5VXD3_9DELT/1-187 AC R5VXD3.1
#=GS A0A380LH74_9FIRM/50-154 AC A0A380LH74.1
#=GS E6KSW0_9ACTO/37-222 AC E6KSW0.1
#=GS Q6YPQ8_ONYPE/6-195 AC Q6YPQ8.1
#=GS A0A0R1YLM2_9LACO/1-153 AC A0A0R1YLM2.1
#=GS A0A1U7EF07_9LACT/12-200 AC A0A1U7EF07.1
#=GS A0A658JLZ7_9CLOT/1-35 AC A0A658JLZ7.1
#=GS R7A431_9FIRM/35-214 AC R7A431.1
#=GS A0A5C5T9M9_9STRE/27-160 AC A0A5C5T9M9.1
#=GS A0A387BIT1_9LACT/27-242 AC A0A387BIT1.1
#=GS S1QY20_9ENTE/1-184 AC S1QY20.1
#=GS A0A095XZW8_9CORY/52-228 AC A0A095XZW8.1
#=GS A0A100YTV6_9ACTN/3-161 AC A0A100YTV6.1
#=GS K6DER7_BACAZ/1-177 AC K6DER7.1
#=GS R9M2M1_9FIRM/9-111 AC R9M2M1.1
#=GS T0TBK9_LACLC/1-76 AC T0TBK9.1
#=GS A0A1R4IJ82_9ACTN/64-187 AC A0A1R4IJ82.1
#=GS J1HFM2_9ACTO/40-222 AC J1HFM2.1
#=GS R5ENB8_9FIRM/3-194 AC R5ENB8.1
#=GS A0A4R5NCQ4_9LACT/20-204 AC A0A4R5NCQ4.1
#=GS A0A139NDS1_9STRE/27-209 AC A0A139NDS1.1
#=GS A0A3N0II49_9ACTN/6-181 AC A0A3N0II49.1
#=GS A0A3N0I668_9ACTN/15-92 AC A0A3N0I668.1
#=GS A0A0E4CTX3_9STRE/1-205 AC A0A0E4CTX3.1
#=GS A0A3S8Z9Y7_9ACTO/53-228 AC A0A3S8Z9Y7.1
#=GS A0A658JMC5_9CLOT/1-192 AC A0A658JMC5.1
#=GS A0A387BH76_9LACT/1-184 AC A0A387BH76.1
#=GS I7L558_9LACO/1-190 AC I7L558.1
#=GS A0A416K0X8_9FIRM/1-159 AC A0A416K0X8.1
#=GS A0A143HEB4_9BACL/2-186 AC A0A143HEB4.1
#=GS A0A1Y3WZ50_9FIRM/1-196 AC A0A1Y3WZ50.1
#=GS A0A139N8X2_9STRE/3-186 AC A0A139N8X2.1
#=GS A0A2S6CP22_9CYAN/6-211 AC A0A2S6CP22.1
#=GS A0A3A9AUJ0_9BACT/1-205 AC A0A3A9AUJ0.1
#=GS R3WMW5_9ENTE/6-188 AC R3WMW5.1
#=GS A0A4Y8KME0_9MICO/16-153 AC A0A4Y8KME0.1
#=GS A0A3M8LFC0_9MICO/52-228 AC A0A3M8LFC0.1
#=GS A0A0R3QHC2_9BILA/2-185 AC A0A0R3QHC2.1
#=GS R9LA03_9ACTN/1-183 AC R9LA03.1
#=GS E1M5N5_9STRE/1-184 AC E1M5N5.1
#=GS A0A0R2KTL6_9LACO/1-216 AC A0A0R2KTL6.1
#=GS F9PM40_9ACTO/40-222 AC F9PM40.1
#=GS A0A2S6CP47_9CYAN/1-144 AC A0A2S6CP47.1
#=GS K9ACR5_9STAP/1-40 AC K9ACR5.1
#=GS A0A0E4H4M5_9STRE/17-213 AC A0A0E4H4M5.1
#=GS A0A4Q4IVM2_9BACL/8-186 AC A0A4Q4IVM2.1
#=GS A0A2S6CQF6_9CYAN/45-235 AC A0A2S6CQF6.1
#=GS A0A3A9D3G1_9BACT/114-299 AC A0A3A9D3G1.1
#=GS A0A3A8ZC79_9BACT/4-194 AC A0A3A8ZC79.1
#=GS A0A087DBM7_9BIFI/5-190 AC A0A087DBM7.1
#=GS U5SDM9_9LACT/2-187 AC U5SDM9.1
#=GS A0A3S0ADE3_9ENTE/10-177 AC A0A3S0ADE3.1
#=GS A0A0R1ZE48_9LACO/7-198 AC A0A0R1ZE48.1
#=GS S3WZK9_9ACTN/37-219 AC S3WZK9.1
#=GS A0A3A9HA94_9FIRM/12-196 AC A0A3A9HA94.1
#=GS REPP_ONYPE/7-194 AC Q8G8D1.1
#=GS A0A1G6DUV1_9STRE/1-209 AC A0A1G6DUV1.1
#=GS Q5FM55_LACAC/1-194 AC Q5FM55.1
#=GS E1MA47_9STRE/1-201 AC E1MA47.1
#=GS A0A087AZJ0_9BIFI/2-186 AC A0A087AZJ0.1
#=GS K9AG62_9STAP/1-184 AC K9AG62.1
#=GS A0A1G6D7X6_9STRE/1-184 AC A0A1G6D7X6.1
#=GS A0A1Q2CYY8_9ACTN/52-216 AC A0A1Q2CYY8.1
#=GS G3K0V5_LACBU/21-204 AC G3K0V5.1
#=GS B8DWT5_BIFA0/9-191 AC B8DWT5.1
#=GS X0QHS4_9LACO/1-205 AC X0QHS4.1
#=GS A0A1Z5ID35_9LACO/1-185 AC A0A1Z5ID35.1
#=GS A0A087E8F3_9BIFI/3-186 AC A0A087E8F3.1
#=GS G7H0A3_9ACTN/41-226 AC G7H0A3.1
#=GS M4YVW4_STREQ/1-184 AC M4YVW4.1
#=GS A0A5P3G1N5_ENTFC/5-189 AC A0A5P3G1N5.1
#=GS A0A173YFZ9_9CLOT/16-209 AC A0A173YFZ9.1
#=GS A0A1V4T113_9GAMM/1-65 AC A0A1V4T113.1
#=GS Q5FLQ6_LACAC/11-204 AC Q5FLQ6.1
#=GS A0A1T4SPD9_9FIRM/1-134 AC A0A1T4SPD9.1
#=GS A8AZW3_STRGC/1-184 AC A8AZW3.1
#=GS A0A0D4CMW6_LACMC/10-210 AC A0A0D4CMW6.1
#=GS M2X9N6_9MICC/52-228 AC M2X9N6.1
#=GS A0A2S6CNV9_9CYAN/4-187 AC A0A2S6CNV9.1
#=GS R7G0T4_9PROT/1-153 AC R7G0T4.1
#=GS W7D2V3_9LIST/4-190 AC W7D2V3.1
#=GS G5KF66_9STRE/2-204 AC G5KF66.1
#=GS K6C7F6_9BACI/1-184 AC K6C7F6.1
#=GS A0A5C5TDU6_9STRE/1-184 AC A0A5C5TDU6.1
#=GS A4VUP1_STRSY/14-212 AC A4VUP1.1
#=GS D7GRK9_9FIRM/14-204 AC D7GRK9.1
A0A087EKU7_9BIFI/5-190 ................................................knn--PNEKGRYWAGLIYP.....gDSC...P...DNWQE.......LMQL.S.GLQILVSPLHDLD...............I..........Ad...vK............T...........G....E......L.KKP........HRHVIAMW..M.NT.TTRRNAQ...RFF...EQFN..GPKT.....IIRLE...-...-....-..-.S..PRGMA....RYLIHLD..N..--..PEKAQYLPE.......N.VLAFNGA..DWQKI...........AI.P..DD.D....K.QEAM...SIVNL.VA.....DNGI...................QGYYDL.......LKLCEQEHPD...LLDF.AAR.Q.T............VF.C.R.EVIWSYW-h................................................................................................
Q5FMZ1_LACAC/1-188 ...................................................MKKAVRARQFMYTQDI......EHL...PfkqEDLKE.......LLEK.S.NAEQWAYILHDKD...............V..........N.....E............K...........G....E......P.IRP........HFHVILKF..K.DA.KTISRIA...KLF...NDQ-..----.....QQYVE...V...W....H..N.T..INNGY....SYLIHET..T..NA..KNKHHYDPS.......E.V------..-----...........VA.S..FD.F....V.TRIK...QIREK.VN.....KPSR...................HDIENF.......IDDYSNE---...----.---.-.-............--.-.-.--------qltkeelqekigvlemakhktlldhiedilaykkhqr............................................................
M4YZM6_STREQ/1-184 ..................................................m-SKEKRSNKWAFLFYK......ESA...P...DNYLD.......ILEE.I.HIPFVLSPWHDKD...............V..........D....kK............T...........G....E......F.KKA........HKHGAFYF..D.SL.KSYSQVS...ELI...KNKL..NGPT....hVEIVM...-...-....-..-.S..PKGMY....DYFTHAE..N..--..PEKTLYNVD.......D.IESGCGF..ELDKF...........LI.D..NH.S....D.EFLT...LVIDL.IE.....EHNF...................TEFNSL.......VRYARLEDIR...ILNL.IMN.K.T............YF.F.A.KYLDSRRH.................................................................................................
A0A380KA39_9STRE/1-184 ..................................................m-VKDKRSNKWGFLLYR......DSC...P...DNYLE.......ILEG.M.RIPFVLSPWHDKD...............V..........N....kE............T...........G....E......F.KKA........HKHGALYF..D.SL.KSYSQVS...ELL...TKNL..NTPA....hVEIIM...-...-....-..-.S..PKGMY....DYFTHAD..N..--..PEKTPYNIE.......D.IESGCGF..DKEKF...........FI.D..NN.S....N.EFLT...LVIDI.IE.....EHNF...................TEFTHL.......VTYARTEDSM...LLRF.IVD.K.T............YF.F.A.KYLDSRRY.................................................................................................
C5C9K3_MICLC/48-227 ........................................yvvqrleatgc----------------......---...-...-----.......----.-.QVVEAYGIVHDRD...............E..........R....eVws........dtD...........KalvvE......P.KPE........HLHAVIKF..A.SR.AKSAPLD...RLA...FGIG..VEPQ....yVEKPG...R...G....R..Y.A..FDNML....SYLTHVK..Y..--..ADKHQYAPS.......E.VATVRGP..DYLG-...........ID.A..QR.R....E.TWLKgraHVKKK.IV.....AENF...................------.......----------...----.---.-.-............--.-.-.--------edmrervlqgeitrdqimltdelfdiysrhqreiddal...........................................................
A0A2A3Z719_9MICO/52-216 ...........................................rleaigce----------------......---...-...-----.......----.-.-VIEAYGIVHDKD...............E..........R....eVws........dtD...........KalvvE......P.KPD........HLHAVIKF..A.SR.AKSAPLD...RLA...FGIG..VEPQ....yVEKPG...R...G....R..Y.A..FDNML....SYLTHVK..Y..--..SDKHQYAPS.......E.VATVRGP..DYL--...........--.-..--.-....-.----...-----.--.....----...................------.......----------...----.---.-.-............--.-.-.--------gidalrretwlkgrahvkkkvvaenfedmrervlqgeitrdqimltdglfdiy............................................
A0A2N6PK40_9MICO/52-228 ............................................rleaigc----------------......---...-...-----.......----.-.EVVEAYGIVHDKD...............E..........RevwsdT............E...........KtlvvE......P.KPD........HLHAVIKF..A.SR.AKSAPLD...RLA...FGIG..VEPQ....yVEKPG...R...G....R..Y.A..FDNML....SYLTHVK..Y..--..ADKHQYAPS.......E.VATVRGP..DYL--...........--.-..--.-....-.----...-----.--.....----...................------.......----------...----.---.-.-............--.-.-.--------gidaqrretwlkgrahvkkkvvaenfedmrervlqgeitrdqimltdelfdiysrhqreiddals................................
K9B461_9MICO/49-225 ...........................................rleaigce----------------......---...-...-----.......----.-.-VIEAYGIVHDKD...............E..........R....eVws........dtE...........KalvvE......P.KPD........HLHAVIKF..A.SR.AKSAPLA...RLA...FGIG..VEPQ....yVEKPG...R...G....R..Y.A..FDNML....SYLTHVK..Y..--..ADKHQYAPS.......E.VATVRGP..DYL--...........--.-..--.-....-.----...-----.--.....----...................------.......----------...----.---.-.-............--.-.-.--------gidaqrretwlkgrahvkkkvvaenfedmrervlqgeitrdqimltdelfdiysrhqreiddals................................
A0A1L8RAU2_9ENTE/14-233 .................................................dk--TKVKARNFAFIIYP......ESI...P...EDWEY.......CLSK.L.GIPMAVSPLHDLDeterkfedmpenekvI..........V.....R............N...........Gg..kV......F.KKP........HYHVLYIA..R.NP.VTAESVR...IKL...KRVL..GNNS.....ISHIE...-...I....V..D.S..VEYYF....QYLTHES..S..DAvkKNKHRYDKK.......D.IVYINDF..DIDRYv.........tLD.E..SE.K....R.ELAN...LIFAL.VRk..yqLENI...................IDLYEF.......VE---ARGDD...YGLP.SMN.Q.IndvvsaksgllrLY.F.D.G-------nyqrrkr..........................................................................................
A0A3A9EUV4_9BACT/14-182 ............................................hfneevi----------------......---...-...---KD.......GLDH.K.TIKRFAYIKHNKDpytl......eeekqG..........K....gK............A...........G....E......L.KND........HWHVVLEC..P.GK.VDIKYIA...KWF...----..-NVP.....EQYIE...L...P....KgrG.A..FLDKV....AYLTHES..EkeQA..KGKALYDDD.......E.V--IANF..DWRKEl.........iER.E..EN.-....-.----...-----.--.....----...................------.......----------...----.---.-.-............--.-.-.--------klkyggdlcpkdrmrydvrylgktlkecqdedkkmymdnekd.......................................................
A0A542X8H2_9MICO/56-220 ............................................rleavgc----------------......---...-...-----.......----.-.EVVEAYGIVHDKD...............E..........R....eVws........dtE...........KalvvE......P.KPD........HLHAVIKF..A.SR.SKSAPLD...RLA...SGI-..-GVE.....PQYVEkpgR...G....R..Y.A..FDNML....SYLTHVK..Y..--..ADKHQYAPS.......E.VATVRGP..DYL--...........--.-..--.-....-.----...-----.--.....----...................------.......----------...----.---.-.-............--.-.-.--------gidalrretwlkgrahvkkkvvaenfedmrervlqgeitrdqimltdglfdiy............................................
Q6LWI0_LACPL/1-205 ..................................................m--AKEKARYFTFLLYP......ESI...P...QDWQT.......KLET.L.GVPIAISPLHDKD...............L..........S....sV............E...........G...qK......Y.KKA........HYHVIYIS..K.NP.VTAESVR...LKI...KRAL..GDKS.....VAKVQ...I...V....V..Q.S..MENMY....LYLTHES..K..DAiaKNKHKYSKH.......D.IAVLNNF..DIDRYi.........tLD.V..ED.K....D.DMLN...DVCDL.ID.....DHNL...................ANMREL.......RRFLKAHGSEygmPGIK.VVN.S.Vlrah...tglirLY.F.D.AVYQERKY.................................................................................................
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A8AZW3_STRGC/1-184 ..................................................m-AKEQRSNKWAFLFYQ......ESA...P...ENYLE.......ILEE.I.HVPFVLSPWHDKD...............V..........N....kK............T...........G....E......F.KKA........HKHGAFYF..D.SL.KSYAQVS...ELI...KDKL..NGPA....hVEPVI...-...-....-..-.S..PKGMY....DYFTHAE..N..--..PEKSPYDIK.......D.IECGCGF..NLAQF...........LV.Q..QN.S....D.DFIT...EVIDT.IE.....QNDI...................TEFEEL.......VWYARDNDTA...LLGL.IIE.R.T............YF.F.S.RYLDSRRY.................................................................................................
A0A0D4CMW6_LACMC/10-210 ...............skskprsavlmlvqqvqllpnnpkhflkskceilkr----------------......---...-...-----.......---R.Y.GLKKYAFILHDQD...............K..........S....sK............N...........N....D......L.VVP........HYHLVMQF..D.HR.VDVAAVA...KIF...EQGIehFEVM.....TKRGT...S...T....K..T.A..AKNSF....AYLVHAT..D..NS..RDKVPYDPQ.......K.V--TANF..NFRKF...........LA.D..SE.S....E.LSTA...DILDG.VA.....EGNI...................TK-DQA.......FDMLRAQGAR...ILVH.NKK.S.-............--.-.-.--------vetmaeeyqrkhhlewlk...............................................................................
M2X9N6_9MICC/52-228 ...........................................rleaigce----------------......---...-...-----.......----.-.-VIEAYGIVHDKD...............E..........R....eVws........dtE...........KalvvE......P.KPD........HLHAVIKF..A.SR.AKSAPLD...RLA...FGIG..VEPQ....yVEKPG...R...G....R..Y.A..FDNML....SYLTHVK..Y..--..ADKHQYAPS.......E.VATVRGP..DYL--...........--.-..--.-....-.----...-----.--.....----...................------.......----------...----.---.-.-............--.-.-.--------gidaqrretwlkgrahvkkkvvaenfedmrervlqgeitrdqimltdelfdiysrhqreiddals................................
A0A2S6CNV9_9CYAN/4-187 ..................................................k-KEIVKGRDWTFIVYP......ESA...P...ENWRT.......ILDE.T.FMRWVESPLHDKD...............V..........N.....A............D...........G....E......I.KKP........HWHILLSS..D.GP.ITQTAVQ...K-I...IGPL..NCPN.....AQKVG...-...-....-..-.S..AKGLV....RYMVHLD..N..--..PEKYQYSLD.......E.IVGHNGA..DVASYf.........eLT.A..TN.K....L.VLMK...EMISF.IY.....ENNI...................DNYAEF.......LMLCIEKSDD...WFNV.AINyN.T............LA.I.N.KMIDAV--wq...............................................................................................
R7G0T4_9PROT/1-153 .................................................mk------LKQYEVVTQP......EYL...K...SPLQD.......ILRK.YrTIKQWAYILHDKD...............K..........D.....-............-...........-....-......-.ASS........HYHIYINF..G.-Q.QTVDSKD...V--...-AGW..FGIP.....EQFVN...K...V....E..G.R..KTDML....MYLTHSN..D..SQ..QHKHQYDFS.......E.V--VANF..DFKSE...........--.-..IE.Q....A.K---...-----.--.....----...................------.......----------...----.---.-.-............--.-.-.--------iigdfekysyaqqldyihslavseqpkcfdrlq................................................................
W7D2V3_9LIST/4-190 .............................................kkknag----LRARNWTLIIYL......DSA...P...ENWKE.......ILTE.T.GVPWAHSPLHDKD...............V..........D.....V............N...........G....C......I.LKP........HYHVVIKF..S.LL.KSYQQML...K-L...TGKL..RAPN.....PQVCV...-...-....-..-.S..LVGSV....VHFTHSN..K..SD..KEKYQYDQQ.......E.IESYNGL..DIEELl.........kPT.K..TE.M....N.EILK...EIRAF.II.....ENDI...................QEFWRL.......CQYADKETSN...WSRV.INT.K.H............TL.I.N.QFVTSYRH.................................................................................................
G5KF66_9STRE/2-204 ...............srkrtttyifeqqlhaeywdweedkkalftnwesnk----------------......---...T...KIFQEihr.rikTLEE.D.IPAKVAFIVHDKD...............I..........K.....F............G...........I....K......S.VEP........HIHAYIEF..A.SR.RDLSVLA...STL...GLL-..PQYI.....EPSGQ...G...R....Y..G.K..V-NSK....AYLIHAK..S..--..PDKHQYAPS.......E.VETFGTF..DYEAF...........IE.D..NK.-....-.----...-----.--.....----...................------.......----------...----.---.-.-............--.-.-.--------adfskryavakreksdesldkvfqeiinghlteddifadeeltflwsynq...............................................
K6C7F6_9BACI/1-184 ...................................................MTKEQRSNKWAFLFYK......ESA...P...DNYLE.......KLEE.I.HVPFVLSPWHDKD...............I..........N....kE............T...........G....E......L.KKS........HKHGTFYF..D.SL.KSYSQVS...ELI...KDKL..NGPA....hVEPVM...-...-....-..-.S..PKGMY....DYFIHAE..N..--..PDKAPYNIE.......D.IESGCGF..ELDKF...........LV.Q..QN.S....D.DFTT...EVIDT.IE.....QNDF...................TEFEEL.......VWYARDNNTA...LLGL.IIE.R.T............YF.F.A.RYLDSRRH.................................................................................................
A0A5C5TDU6_9STRE/1-184 ...................................................MTKEKRSNKWAFLLYQ......DST...P...KNYLD.......ILED.M.HIPFILSPWHDKD...............I..........N....rQ............T...........G....E......F.KKA........HKHGALFF..D.SL.KSYSQVS...ELL...TEKL..NTPA....hIEIVM...-...-....-..-.S..PKGMY....DYFIHAN..D..--..PNKTPYDIN.......D.IEFGCGF..DLDKF...........LI.S..NN.T....D.GFIT...SVIDI.IE.....ENNF...................TEFKNL.......VLYARREDAK...LLEF.IME.K.T............YF.F.S.RYLDSRRH.................................................................................................
A4VUP1_STRSY/14-212 ..............................................krkms-EKVPSIRHTAYMFCSt....vESV..sI...KNLQEii...klFQET.L.NPFEIAGIIHDKD...............I..........D.....-............-...........-....-......-.TEP........HYHIIVRF..K.NA.VWLNSII...NKL...SQNG..FEVQ.....SNFFE...A...W....K..G.K..VNNAY....SYLIHRT..E..DA..SEKHQYTVD.......E.V------..-----...........IA.N..FD.Y....A.ERIE...NIESK.IQ.....SNSRkektinvvrnlinkiiagdISFDEA.......IK--------...----.---.-.-............--.-.-.--------evdgytlvkydrefsrakkrrteidf.......................................................................
D7GRK9_9FIRM/14-204 ................................................tep---KKTYRTFEIMQYEy....nPKT...G...EDLHFnravimkALAH.K.TIKQWIYVRHDRD...............K..........N.....D............D...........G....T......P.KAP........HWHVYIYC..N.PA.KSLDDIS...KWF...GGVP..TNMI.....ELKVG...-...-....K..H.S..FLDCA....EYFTHEK..Q..--..PTKALYDDT.......K.L--YSNM..PWRQM...........LN.E..RD.E....K.RA--...-----.--.....----...................------.......----------...----.---.-.-............--.-.-.--------kygdediqfrdlqrvdvlnfgktlkqckiddpvlyvkemqilkkcrleyl...............................................
#=GC seq_cons ..................................................h................................tph.p.......hlpp...tl.hhhu.lHDKD...............l..........s.....t............s...........G....c......h.Kcs........HhHsllhF..p.sh.pohppls...chh...tphh...t.t.....sphsp.................u..hpshh....pYLsHhs..p......s-KapYs.p.......-.l..hssh..Dhtth...........h..t...p........phht...phhph.lp.....p.th....................th..h............................................................................................................................................................
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