GenomeNet

Database: Pfam
Entry: SWIM
LinkDB: SWIM
Original site: SWIM 
#=GF ID   SWIM
#=GF AC   PF04434.19
#=GF DE   SWIM zinc finger
#=GF AU   Aravind L;0000-0003-0771-253X
#=GF SE   Aravind L
#=GF GA   19.60 7.50;
#=GF TC   19.60 7.50;
#=GF NC   19.50 7.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 57096847 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   12151216
#=GF RT   SWIM, a novel Zn-chelating domain present in bacteria, archaea
#=GF RT   and eukaryotes. 
#=GF RA   Makarova KS, Aravind L, Koonin EV; 
#=GF RL   Trends Biochem Sci 2002;27:384-386.
#=GF DR   INTERPRO; IPR007527;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is found in bacterial, archaeal and eukaryotic
#=GF CC   proteins. It is predicted to be organised into two N-terminal
#=GF CC   beta-strands and a C-terminal alpha helix, thus possibly
#=GF CC   adopting a fold similar to that of the C2H2 zinc finger
#=GF CC   (Pfam:PF00096). SWIM is thought to be a versatile domain that
#=GF CC   can interact with DNA or proteins in different contexts [1].
#=GF SQ   15037
#=GS R0EV01_9BRAS/614-662        AC R0EV01.1
#=GS A0A2G3B723_CAPCH/25-64      AC A0A2G3B723.1
#=GS A0A0D2PF66_GOSRA/11-53      AC A0A0D2PF66.1
#=GS A0A2I0V8S8_9ASPA/406-442    AC A0A2I0V8S8.1
#=GS A0A6A5NY40_LUPAL/306-354    AC A0A6A5NY40.1
#=GS A0A453J487_AEGTS/247-278    AC A0A453J487.1
#=GS A0A2U1QJF8_ARTAN/677-705    AC A0A2U1QJF8.1
#=GS A0A445CLJ2_ARAHY/581-631    AC A0A445CLJ2.1
#=GS A0A370GLT3_9NOCA/88-135     AC A0A370GLT3.1
#=GS A0A1M7E8F4_9BACT/56-94      AC A0A1M7E8F4.1
#=GS A0A150GWD6_GONPE/34-66      AC A0A150GWD6.1
#=GS A0A3L6RH93_PANMI/525-561    AC A0A3L6RH93.1
#=GS A0A2K6UMD6_SAIBB/524-572    AC A0A2K6UMD6.1
#=GS A0A3M7Q6M7_BRAPC/8-49       AC A0A3M7Q6M7.1
#=GS A0A1U8KBP0_GOSHI/28-66      AC A0A1U8KBP0.1
#=GS A0A6A5LL79_LUPAL/102-143    AC A0A6A5LL79.1
#=GS B8BF07_ORYSI/492-537        AC B8BF07.1
#=GS W1NRQ4_AMBTC/2-42           AC W1NRQ4.1
#=GS A0A1H3PTA0_9ACTN/124-165    AC A0A1H3PTA0.1
#=GS Q5ZD68_ORYSJ/530-566        AC Q5ZD68.1
#=GS A0A444XXU8_ARAHY/27-77      AC A0A444XXU8.1
#=GS A0A2P6NZZ1_9EUKA/117-149    AC A0A2P6NZZ1.1
#=GS A0A1S4BQN8_TOBAC/513-544    AC A0A1S4BQN8.1
#=GS A0A2I4F6C7_JUGRE/594-645    AC A0A2I4F6C7.1
#=GS G1Q4F1_MYOLU/71-118         AC G1Q4F1.1
#=GS B9HD59_POPTR/564-600        AC B9HD59.2
#=GS A0A2P5W7G4_GOSBA/42-86      AC A0A2P5W7G4.1
#=GS A0A4D9AKR1_SALSN/743-780    AC A0A4D9AKR1.1
#=GS A0A561WS18_ACTTI/127-167    AC A0A561WS18.1
#=GS A0A0D2X3C0_CAPO3/68-114     AC A0A0D2X3C0.1
#=GS A0A0U1NQ91_9BACI/65-89      AC A0A0U1NQ91.1
#=GS L1NI79_9NEIS/48-84          AC L1NI79.1
#=GS A0A4D8Z099_SALSN/18-59      AC A0A4D8Z099.1
#=GS A0A2U1P9Y7_ARTAN/993-1025   AC A0A2U1P9Y7.1
#=GS A0A3Q9FY59_STRLT/65-94      AC A0A3Q9FY59.1
#=GS A0A445B7D6_ARAHY/300-334    AC A0A445B7D6.1
#=GS A0A452ZIH5_AEGTS/580-628    AC A0A452ZIH5.1
#=GS A0A165IMF0_EXIGL/334-376    AC A0A165IMF0.1
#=GS A0A1I4I8T1_9BACI/58-94      AC A0A1I4I8T1.1
#=GS A0A433XX44_9BACL/63-95      AC A0A433XX44.1
#=GS A5C4J5_VITVI/599-650        AC A5C4J5.1
#=GS A0A444YUJ8_ARAHY/714-772    AC A0A444YUJ8.1
#=GS A0A1Q3BYS1_CEPFO/132-173    AC A0A1Q3BYS1.1
#=GS A0A397GMJ2_9GLOM/50-82      AC A0A397GMJ2.1
#=GS S9R246_9RHOB/21-53          AC S9R246.1
#=GS A0A392R388_9FABA/42-89      AC A0A392R388.1
#=GS A0A2T7EWC7_9POAL/680-727    AC A0A2T7EWC7.1
#=GS V4SEI3_9ROSI/601-652        AC V4SEI3.1
#=GS A0A2U1LHI1_ARTAN/613-647    AC A0A2U1LHI1.1
#=GS W9YVI9_9EURO/160-191        AC W9YVI9.1
#=GS A0A446QG75_TRITD/499-544    AC A0A446QG75.1
#=GS A0A176L076_9ACTN/59-89      AC A0A176L076.1
#=GS A0A1Q3D0C2_CEPFO/84-117     AC A0A1Q3D0C2.1
#=GS A0A444ZHN9_ARAHY/503-548    AC A0A444ZHN9.1
#=GS A0A2U8GUB6_9RHOO/53-92      AC A0A2U8GUB6.1
#=GS A0A1R3J3R7_9ROSI/351-387    AC A0A1R3J3R7.1
#=GS A0A4R5A9X6_9ACTN/398-441    AC A0A4R5A9X6.1
#=GS A0A1C5C193_9ACTN/83-110     AC A0A1C5C193.1
#=GS A0A1R3HN51_9ROSI/85-118     AC A0A1R3HN51.1
#=GS A0A4S4L2Z7_9AGAM/120-152    AC A0A4S4L2Z7.1
#=GS A0A6P9E658_JUGRE/384-425    AC A0A6P9E658.1
#=GS A0A061FW45_THECC/491-525    AC A0A061FW45.1
#=GS A0A1Q3BU72_CEPFO/174-217    AC A0A1Q3BU72.1
#=GS A0A1U7WS04_NICSY/254-280    AC A0A1U7WS04.1
#=GS A0A2P5VSC5_GOSBA/261-287    AC A0A2P5VSC5.1
#=GS A0A446TH36_TRITD/811-858    AC A0A446TH36.1
#=GS A0A5D2XWS1_GOSMU/398-442    AC A0A5D2XWS1.1
#=GS A0A1U7VLF7_NICSY/359-399    AC A0A1U7VLF7.1
#=GS A0A1U7XNM3_NICSY/491-516    AC A0A1U7XNM3.1
#=GS A0A1S3X6C8_TOBAC/60-90      AC A0A1S3X6C8.1
#=GS A0A061FGM1_THECC/539-587    AC A0A061FGM1.1
#=GS A0A1Q4RA10_9CYAN/107-147    AC A0A1Q4RA10.1
#=GS A0A444XNS7_ARAHY/603-654    AC A0A444XNS7.1
#=GS S7TVQ5_DESML/58-90          AC S7TVQ5.1
#=GS A0A445CEX6_ARAHY/145-186    AC A0A445CEX6.1
#=GS A0A3Q7YBU7_CICAR/373-411    AC A0A3Q7YBU7.1
#=GS A0A1U8PN83_GOSHI/51-86      AC A0A1U8PN83.1
#=GS A0A0R1VKV7_9LACO/47-85      AC A0A0R1VKV7.1
#=GS A0A2K2CGM7_BRADI/529-567    AC A0A2K2CGM7.1
#=GS A0A5C7HR10_9ROSI/364-412    AC A0A5C7HR10.1
#=GS A0A314KPE6_NICAT/259-293    AC A0A314KPE6.1
#=GS A0A444XFJ4_ARAHY/373-407    AC A0A444XFJ4.1
#=GS A0A1R3HP28_COCAP/570-618    AC A0A1R3HP28.1
#=GS A0A5C7GUZ7_9ROSI/444-495    AC A0A5C7GUZ7.1
#=GS A0A318SBB2_9DEIO/75-109     AC A0A318SBB2.1
#=GS A0A445B7B2_ARAHY/129-163    AC A0A445B7B2.1
#=GS F2SYP2_TRIRC/115-147        AC F2SYP2.2
#=GS A0A4Y7LFK6_PAPSO/1510-1556  AC A0A4Y7LFK6.1
#=GS A0A2I0VTD4_9ASPA/67-104     AC A0A2I0VTD4.1
#=GS A0A1S4AIB7_TOBAC/10-50      AC A0A1S4AIB7.1
#=GS A0A1U7V0C5_NICSY/173-217    AC A0A1U7V0C5.1
#=GS A0A1U7XP35_NICSY/112-152    AC A0A1U7XP35.1
#=GS A0A2G5CZ65_AQUCA/597-639    AC A0A2G5CZ65.1
#=GS A0A6P9EU99_JUGRE/659-693    AC A0A6P9EU99.1
#=GS A0A2K1JRV0_PHYPA/215-249    AC A0A2K1JRV0.1
#=GS A0A2G2XYG3_CAPAN/719-759    AC A0A2G2XYG3.1
#=GS A0A6I2FG23_9MICO/58-94      AC A0A6I2FG23.1
#=GS A0A2U1KZ51_ARTAN/347-387    AC A0A2U1KZ51.1
#=GS B4JWU8_DROGR/98-134         AC B4JWU8.1
#=GS A0A2I0VBB9_9ASPA/228-264    AC A0A2I0VBB9.1
#=GS A0A446PEG2_TRITD/696-745    AC A0A446PEG2.1
#=GS A0A397JLJ8_9GLOM/76-108     AC A0A397JLJ8.1
#=GS A0A164SJY5_9CRUS/204-246    AC A0A164SJY5.1
#=GS A0A1S3XLH1_TOBAC/462-513    AC A0A1S3XLH1.1
#=GS A0A109IJ92_9ACTN/404-433    AC A0A109IJ92.1
#=GS A0A6A2YT38_HIBSY/2165-2208  AC A0A6A2YT38.1
#=GS A0A1D6L6J8_MAIZE/888-935    AC A0A1D6L6J8.1
#=GS A0A2P5GNN5_9ENTR/52-84      AC A0A2P5GNN5.1
#=GS A0A096NCU6_PAPAN/373-405    AC A0A096NCU6.2
#=GS A0A444XUJ0_ARAHY/455-489    AC A0A444XUJ0.1
#=GS A0A1S4D401_TOBAC/365-402    AC A0A1S4D401.1
#=GS A0A1G9Y5K8_9BACI/46-97      AC A0A1G9Y5K8.1
#=GS A0A446TV03_TRITD/582-620    AC A0A446TV03.1
#=GS A0A1S3A5B7_ERIEU/54-87      AC A0A1S3A5B7.1
#=GS A0A5C7GVA4_9ROSI/383-426    AC A0A5C7GVA4.1
#=GS A0A5F5Y1E2_FELCA/15-47      AC A0A5F5Y1E2.1
#=GS A0A5J4Z184_PORPP/255-294    AC A0A5J4Z184.1
#=GS A0A4D9C133_SALSN/565-601    AC A0A4D9C133.1
#=GS A0A1Y2J5G1_PYCCO/121-153    AC A0A1Y2J5G1.1
#=GS A0A1U7XVU9_NICSY/403-443    AC A0A1U7XVU9.1
#=GS A0A6A2XX53_HIBSY/589-640    AC A0A6A2XX53.1
#=GS A0A2G5EY80_AQUCA/636-678    AC A0A2G5EY80.1
#=GS A0A2G3BRT2_CAPCH/279-316    AC A0A2G3BRT2.1
#=GS A0A397KW70_BRACM/501-546    AC A0A397KW70.1
#=GS K0Q4S4_9RHIZ/2-35           AC K0Q4S4.1
#=GS F7B0L7_ORNAN/66-114         AC F7B0L7.3
#=GS R0GGI7_9BRAS/440-492        AC R0GGI7.1
#=GS A0A1H5HXC7_9ACTN/58-93      AC A0A1H5HXC7.1
#=GS A0A061PE41_9BACL/52-92      AC A0A061PE41.1
#=GS S4RCR0_PETMA/51-84          AC S4RCR0.1
#=GS A0A0P0X0S4_ORYSJ/54-92      AC A0A0P0X0S4.1
#=GS A0A3L6RPE7_PANMI/586-622    AC A0A3L6RPE7.1
#=GS A0A2U1MR48_ARTAN/756-794    AC A0A2U1MR48.1
#=GS G4ZJN6_PHYSP/86-127         AC G4ZJN6.1
#=GS A0A2U1MT61_ARTAN/851-890    AC A0A2U1MT61.1
#=GS A0A445EHC2_ARAHY/535-568    AC A0A445EHC2.1
#=GS A0A4Y7L266_PAPSO/553-589    AC A0A4Y7L266.1
#=GS I1GY28_BRADI/55-85          AC I1GY28.1
#=GS A0A444XYH3_ARAHY/318-359    AC A0A444XYH3.1
#=GS A0A0C2V6M7_9BACL/48-90      AC A0A0C2V6M7.1
#=GS A0A445EGW6_ARAHY/564-622    AC A0A445EGW6.1
#=GS A0A2G2ZBV0_CAPAN/618-654    AC A0A2G2ZBV0.1
#=GS A0A445EED0_ARAHY/269-303    AC A0A445EED0.1
#=GS A0A2Z6ZWT2_9LAMI/32-79      AC A0A2Z6ZWT2.1
#=GS A0A2U1NMY1_ARTAN/199-234    AC A0A2U1NMY1.1
#=GS A0A135TYN5_9PEZI/197-218    AC A0A135TYN5.1
#=GS A0A453IXW9_AEGTS/575-622    AC A0A453IXW9.1
#=GS A0A5N5HY45_9ROSA/123-165    AC A0A5N5HY45.1
#=GS A0A2I4HKW2_JUGRE/602-653    AC A0A2I4HKW2.1
#=GS A0A117P888_9ACTN/66-93      AC A0A117P888.1
#=GS A0A2G9GSV4_9LAMI/390-426    AC A0A2G9GSV4.1
#=GS K9TMA0_9CYAN/57-89          AC K9TMA0.1
#=GS D3EAM0_GEOS4/63-96          AC D3EAM0.1
#=GS A0A444XNJ7_ARAHY/386-431    AC A0A444XNJ7.1
#=GS A0A6I4M1X2_9ACTN/119-152    AC A0A6I4M1X2.1
#=GS A0A445CWJ0_ARAHY/233-284    AC A0A445CWJ0.1
#=GS A0A2K3M863_TRIPR/390-426    AC A0A2K3M863.1
#=GS A0A550HE84_9ACTN/405-446    AC A0A550HE84.1
#=GS A0A6A3P566_9STRA/182-229    AC A0A6A3P566.1
#=GS A0A1X4IBW4_9ACTN/58-93      AC A0A1X4IBW4.1
#=GS A0A1S4E5V1_CUCME/601-645    AC A0A1S4E5V1.1
#=GS A0A453P212_AEGTS/531-578    AC A0A453P212.1
#=GS A0A078JCM3_BRANA/256-286    AC A0A078JCM3.1
#=GS A0A5C7HLI5_9ROSI/344-376    AC A0A5C7HLI5.1
#=GS K0K1L8_SACES/118-155        AC K0K1L8.1
#=GS A0A1G8W8D1_9ACTN/392-441    AC A0A1G8W8D1.1
#=GS A0A445BS13_ARAHY/161-203    AC A0A445BS13.1
#=GS S5Z7C5_9CREN/37-83          AC S5Z7C5.1
#=GS A0A444Y3D7_ARAHY/354-397    AC A0A444Y3D7.1
#=GS A0A3E2JKS6_9BACI/51-90      AC A0A3E2JKS6.1
#=GS A0A238W0L2_HALVU/20-51      AC A0A238W0L2.1
#=GS A0A444Z738_ARAHY/605-650    AC A0A444Z738.1
#=GS A0A3A9CV01_9BACT/74-105     AC A0A3A9CV01.1
#=GS A0A151TE81_CAJCA/153-197    AC A0A151TE81.1
#=GS A1WG29_VEREI/156-181        AC A1WG29.1
#=GS A0A0D0CVH8_9AGAM/212-244    AC A0A0D0CVH8.1
#=GS A0A022QJ50_ERYGU/334-377    AC A0A022QJ50.1
#=GS Q091W9_STIAD/56-88          AC Q091W9.1
#=GS A0A427YSF1_9TREE/314-347    AC A0A427YSF1.1
#=GS A0A1Z5SG66_9BACT/56-94      AC A0A1Z5SG66.1
#=GS G7ZHJ5_AZOL4/54-94          AC G7ZHJ5.1
#=GS A0A176U1T8_9FIRM/56-94      AC A0A176U1T8.1
#=GS A0A1S8CBB3_9ACTN/73-95      AC A0A1S8CBB3.1
#=GS A0A5J9VTF9_9POAL/531-578    AC A0A5J9VTF9.1
#=GS A0A2H3Y9M3_PHODC/632-676    AC A0A2H3Y9M3.1
#=GS A0A1S4BGG4_TOBAC/561-607    AC A0A1S4BGG4.1
#=GS A0A1B8B1I2_FUSPO/143-171    AC A0A1B8B1I2.1
#=GS K7I4D7_CAEJA/230-266        AC K7I4D7.1
#=GS A0A1V4K296_PATFA/66-114     AC A0A1V4K296.1
#=GS A0A444X7S2_ARAHY/714-772    AC A0A444X7S2.1
#=GS U1Q2D3_9ACTO/57-89          AC U1Q2D3.1
#=GS A0A2G3CLG6_CAPCH/340-390    AC A0A2G3CLG6.1
#=GS A0A444XKS3_ARAHY/117-158    AC A0A444XKS3.1
#=GS A0A327RTV7_9BACI/65-98      AC A0A327RTV7.1
#=GS A1BFU2_CHLPD/135-167        AC A1BFU2.1
#=GS K3ZMA8_SETIT/444-478        AC K3ZMA8.1
#=GS A0A0K1QG80_9DELT/56-87      AC A0A0K1QG80.1
#=GS A0A5A7VG38_CUCME/572-621    AC A0A5A7VG38.1
#=GS A0A1S4AYA6_TOBAC/392-416    AC A0A1S4AYA6.1
#=GS A0A5N5JJP2_9ROSI/563-598    AC A0A5N5JJP2.1
#=GS A0A6H9UTN0_9ACTN/132-158    AC A0A6H9UTN0.1
#=GS A0A5N5LID7_9ROSI/574-622    AC A0A5N5LID7.1
#=GS A0A1H6EQF8_9ACTN/384-435    AC A0A1H6EQF8.1
#=GS A0A494X177_9FIRM/52-87      AC A0A494X177.1
#=GS A0A2U1M453_ARTAN/423-459    AC A0A2U1M453.1
#=GS A0A445EFQ1_ARAHY/692-733    AC A0A445EFQ1.1
#=GS A0A6P9ETN9_JUGRE/37-73      AC A0A6P9ETN9.1
#=GS A0A445E9X7_ARAHY/513-556    AC A0A445E9X7.1
#=GS A0A3E0HVK0_9PSEU/50-80      AC A0A3E0HVK0.1
#=GS A0A2G9GVU0_9LAMI/485-535    AC A0A2G9GVU0.1
#=GS A0A444XFL3_ARAHY/165-199    AC A0A444XFL3.1
#=GS A0A1S4DKG9_TOBAC/220-261    AC A0A1S4DKG9.1
#=GS A0A2I4H9N9_JUGRE/491-538    AC A0A2I4H9N9.2
#=GS A0A0L1KVE3_9EUGL/146-201    AC A0A0L1KVE3.1
#=GS H2RCP7_PANTR/66-113         AC H2RCP7.1
#=GS A0A2M8LS86_9ACTN/57-92      AC A0A2M8LS86.1
#=GS A0A6A5NR91_LUPAL/623-651    AC A0A6A5NR91.1
#=GS A0A444XIE9_ARAHY/492-537    AC A0A444XIE9.1
#=GS A0A444XF48_ARAHY/374-408    AC A0A444XF48.1
#=GS A0A2G2XD88_CAPBA/442-483    AC A0A2G2XD88.1
#=GS A0A1Q9LT82_9PSEU/146-169    AC A0A1Q9LT82.1
#=GS E8RKD7_ASTEC/56-85          AC E8RKD7.1
#=GS A0A3N6QC88_BRACR/168-216    AC A0A3N6QC88.1
#=GS A0A5A7U2U8_CUCME/669-707    AC A0A5A7U2U8.1
#=GS K3ZQX4_SETIT/528-575        AC K3ZQX4.1
#=GS A0A1R3GXK5_9ROSI/245-293    AC A0A1R3GXK5.1
#=GS A0A444XFB2_ARAHY/273-307    AC A0A444XFB2.1
#=GS E7NXF4_TREPH/120-145        AC E7NXF4.1
#=GS A0A151P058_ALLMI/252-284    AC A0A151P058.1
#=GS A0A1Y4HVD8_9FIRM/54-90      AC A0A1Y4HVD8.1
#=GS A0A397GNW1_9GLOM/108-137    AC A0A397GNW1.1
#=GS A0A453B2Q8_AEGTS/93-143     AC A0A453B2Q8.1
#=GS A0A1S3W1T1_VIGRR/389-429    AC A0A1S3W1T1.1
#=GS A0A1S3TLK3_VIGRR/469-508    AC A0A1S3TLK3.1
#=GS A0A0N4YU19_NIPBR/222-258    AC A0A0N4YU19.1
#=GS A0A2U1PZ31_ARTAN/42-93      AC A0A2U1PZ31.1
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