GenomeNet

Database: Pfam
Entry: Sigma54_activat
LinkDB: Sigma54_activat
Original site: Sigma54_activat 
#=GF ID   Sigma54_activat
#=GF AC   PF00158.26
#=GF DE   Sigma-54 interaction domain
#=GF PI   sigma54;
#=GF AU   Sonnhammer ELL;0000-0002-9015-5588
#=GF SE   Prosite
#=GF GA   20.20 20.20;
#=GF TC   20.20 20.20;
#=GF NC   20.10 20.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 45638612 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   11544185
#=GF RT   Binding of transcriptional activators to sigma 54 in the
#=GF RT   presence of the transition state analog ADP-aluminum fluoride:
#=GF RT   insights into activator mechanochemical action. 
#=GF RA   Chaney M, Grande R, Wigneshweraraj SR, Cannon W, Casaz P,
#=GF RA   Gallegos MT, Schumacher J, Jones S, Elderkin S, Dago AE, Morett
#=GF RA   E, Buck M; 
#=GF RL   Genes Dev 2001;15:2282-2294.
#=GF RN   [2]
#=GF RM   12618438
#=GF RT   Domain Architectures of sigma(54)-Dependent Transcriptional
#=GF RT   Activators. 
#=GF RA   Studholme DJ, Dixon R; 
#=GF RL   J Bacteriol 2003;185:1757-1767.
#=GF DR   INTERPRO; IPR002078;
#=GF DR   PROSITE; PDOC00579;
#=GF DR   SCOP; 1l5z; fa;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF SQ   38214
#=GS A0A259U4X5_9FIRM/344-507    AC A0A259U4X5.1
#=GS J3HXJ3_9BURK/33-201         AC J3HXJ3.1
#=GS A0A1Q8QJT3_9DELT/38-194     AC A0A1Q8QJT3.1
#=GS A0A1Z4PPS7_9CYAN/164-308    AC A0A1Z4PPS7.1
#=GS A0A1G8TH81_9RHOB/178-349    AC A0A1G8TH81.1
#=GS A0A285S7H2_9RHOB/142-306    AC A0A285S7H2.1
#=GS W4MFL0_9BACT/13-180         AC W4MFL0.1
#=GS V6SAS9_9FLAO/13-180         AC V6SAS9.1
#=GS I0KF59_9BACT/150-317        AC I0KF59.1
#=GS A0A1H9C688_9BACT/533-700    AC A0A1H9C688.1
#=GS A0A1E5Q9T2_9PROT/149-316    AC A0A1E5Q9T2.1
#=GS A0A1S9I3S4_9CLOT/281-449    AC A0A1S9I3S4.1
#=GS A0A0A2DXQ8_9PORP/147-314    AC A0A0A2DXQ8.1
#=GS A0A0V2F9R3_CAUVI/142-306    AC A0A0V2F9R3.1
#=GS E4TR13_MARTH/143-310        AC E4TR13.1
#=GS A0A0R1PQT5_9LACO/72-247     AC A0A0R1PQT5.1
#=GS A0A1I7HRM9_9BACL/179-345    AC A0A1I7HRM9.1
#=GS A0A285P4A8_9PSED/140-307    AC A0A285P4A8.1
#=GS A0A1Q4BRU6_9PROT/142-309    AC A0A1Q4BRU6.1
#=GS U2FU30_9BURK/321-489        AC U2FU30.1
#=GS C0D8A8_9FIRM/333-488        AC C0D8A8.1
#=GS A0A1N6S961_9FLAO/141-308    AC A0A1N6S961.1
#=GS A0A1J5CZL3_9BACT/142-310    AC A0A1J5CZL3.1
#=GS A0A1M5ZN54_9FIRM/315-483    AC A0A1M5ZN54.1
#=GS A0A1P8K117_9BURK/142-309    AC A0A1P8K117.1
#=GS C8S0U1_9RHOB/229-396        AC C8S0U1.1
#=GS A0A081MB66_9RHIZ/138-305    AC A0A081MB66.1
#=GS A0A0D1NMM3_PSEPU/194-361    AC A0A0D1NMM3.1
#=GS A0A268E886_9BACI/156-322    AC A0A268E886.1
#=GS Q0AAS6_ALKEH/121-288        AC Q0AAS6.1
#=GS A0A1X1DD53_9GAMM/140-307    AC A0A1X1DD53.1
#=GS A0A1G6ZX08_9PROT/150-317    AC A0A1G6ZX08.1
#=GS Q8PPN1_XANAC/348-516        AC Q8PPN1.1
#=GS A0A085L0F3_9FLAO/13-180     AC A0A085L0F3.1
#=GS A0A0E3ZGJ3_9BACT/169-257    AC A0A0E3ZGJ3.1
#=GS A0A1T5M9M2_9CLOT/273-441    AC A0A1T5M9M2.1
#=GS A0A1F3RK33_9PROT/141-308    AC A0A1F3RK33.1
#=GS G0A8J9_COLFT/350-518        AC G0A8J9.1
#=GS A0A1F3Y955_9PROT/125-291    AC A0A1F3Y955.1
#=GS A0A0M4D6Q0_SPHS1/146-313    AC A0A0M4D6Q0.1
#=GS A0A257C7I5_9BURK/146-313    AC A0A257C7I5.1
#=GS A0A1R3V6A0_9RHIZ/141-308    AC A0A1R3V6A0.1
#=GS A0A017T3B6_9DELT/152-319    AC A0A017T3B6.1
#=GS W4HPK0_9RHOB/146-299        AC W4HPK0.1
#=GS A0A023BRN3_9FLAO/154-321    AC A0A023BRN3.1
#=GS A0A243PE09_9SPHN/144-311    AC A0A243PE09.1
#=GS A0A1G0MAY2_9DELT/143-310    AC A0A1G0MAY2.1
#=GS A0A085TZA2_9RHOB/163-330    AC A0A085TZA2.1
#=GS A0A0G9HP54_9XANT/143-310    AC A0A0G9HP54.1
#=GS S4XI15_SORCE/23-190         AC S4XI15.1
#=GS G7WCE7_DESOD/140-307        AC G7WCE7.1
#=GS A0A085W2U5_9DELT/134-301    AC A0A085W2U5.1
#=GS A0A095VV93_9GAMM/128-282    AC A0A095VV93.1
#=GS R6FFY7_9BACE/132-299        AC R6FFY7.1
#=GS S0G5L5_9DELT/270-437        AC S0G5L5.1
#=GS A0A0N0Z6T0_9BACI/305-473    AC A0A0N0Z6T0.1
#=GS A0A0Q1BD52_9RHOB/144-311    AC A0A0Q1BD52.1
#=GS A0A261QHZ0_9BACI/142-309    AC A0A261QHZ0.1
#=GS A0A1N6UIA7_9GAMM/140-307    AC A0A1N6UIA7.1
#=GS A0A1I4Q871_9RHOB/156-319    AC A0A1I4Q871.1
#=GS A0A0K1P828_9DELT/150-317    AC A0A0K1P828.1
#=GS A0A1E7Q063_9ALTE/180-348    AC A0A1E7Q063.1
#=GS A0A1A9NNJ2_9PROT/157-331    AC A0A1A9NNJ2.1
#=GS A0A0F2JK72_9FIRM/154-320    AC A0A0F2JK72.1
#=GS A0A0B7MNC6_9FIRM/33-201     AC A0A0B7MNC6.1
#=GS A0A100YTU1_9FIRM/338-506    AC A0A100YTU1.1
#=GS A0A1X0HME0_MYCPF/165-247    AC A0A1X0HME0.1
#=GS A0A1I3U5D8_9BACL/368-536    AC A0A1I3U5D8.1
#=GS Q5LCL5_BACFN/154-321        AC Q5LCL5.1
#=GS A0A0R2X170_9FLAO/13-180     AC A0A0R2X170.1
#=GS A0A261S6F4_9BORD/338-501    AC A0A261S6F4.1
#=GS A0A0G2ZTK8_9DELT/1-136      AC A0A0G2ZTK8.1
#=GS A0A139BQ52_9PROT/147-314    AC A0A139BQ52.1
#=GS A0A135I7N7_9GAMM/149-315    AC A0A135I7N7.1
#=GS A0A1F7TCE8_9BACT/22-189     AC A0A1F7TCE8.1
#=GS A0A1I1H459_9BACT/143-310    AC A0A1I1H459.1
#=GS A0A0P7WIH8_9ALTE/340-508    AC A0A0P7WIH8.1
#=GS A0A1W9L9S4_9GAMM/145-312    AC A0A1W9L9S4.1
#=GS A0A1W1HCQ5_9DELT/176-298    AC A0A1W1HCQ5.1
#=GS Q0APQ1_MARMM/142-306        AC Q0APQ1.1
#=GS A0A1W2D4K6_9FLAO/14-181     AC A0A1W2D4K6.1
#=GS A0A254QFA3_9PROT/105-272    AC A0A254QFA3.1
#=GS A0A165R179_9SPHN/142-305    AC A0A165R179.1
#=GS A0A1H8EPB1_9BURK/226-397    AC A0A1H8EPB1.1
#=GS A0A1W9N8R3_9SPIO/146-313    AC A0A1W9N8R3.1
#=GS A0A1T4R3Z2_9GAMM/201-369    AC A0A1T4R3Z2.1
#=GS A0A165Q9M4_9SPHN/150-317    AC A0A165Q9M4.1
#=GS A0A2A5CNN9_9GAMM/138-305    AC A0A2A5CNN9.1
#=GS A0A1K1Q243_9FLAO/146-313    AC A0A1K1Q243.1
#=GS A0A2H3P6W4_9BACT/636-797    AC A0A2H3P6W4.1
#=GS A0A081NLQ5_9GAMM/141-308    AC A0A081NLQ5.1
#=GS A0A0F4PRA0_9GAMM/136-303    AC A0A0F4PRA0.1
#=GS C1DF92_AZOVD/349-517        AC C1DF92.1
#=GS A0A238YZ18_9FLAO/146-313    AC A0A238YZ18.1
#=GS D3P308_AZOS1/150-317        AC D3P308.1
#=GS A0A239FSU0_9FIRM/139-306    AC A0A239FSU0.1
#=GS A0A193LEQ7_9GAMM/143-310    AC A0A193LEQ7.1
#=GS A0A1H3Y4V2_9FLAO/158-246    AC A0A1H3Y4V2.1
#=GS L7UFP0_MYXSD/206-373        AC L7UFP0.1
#=GS L9PAW5_9BURK/146-313        AC L9PAW5.1
#=GS A0A1J5BRX5_9BURK/341-506    AC A0A1J5BRX5.1
#=GS A0A069I9P4_9BURK/315-483    AC A0A069I9P4.1
#=GS A0A1G7KGG6_9BRAD/151-318    AC A0A1G7KGG6.1
#=GS H8FQC3_PHAMO/148-315        AC H8FQC3.1
#=GS W6NIT1_CLOTY/130-301        AC W6NIT1.1
#=GS A0A159Z3I3_9RHOB/165-331    AC A0A159Z3I3.1
#=GS A0A0N1ADA3_9PROT/185-356    AC A0A0N1ADA3.1
#=GS A0A1Y4DFN3_9DELT/327-495    AC A0A1Y4DFN3.1
#=GS V5AWR1_ENTCL/8-174          AC V5AWR1.1
#=GS A0A0N0K0B0_9SPHN/139-306    AC A0A0N0K0B0.1
#=GS A0A0F3KKK2_9NEIS/135-302    AC A0A0F3KKK2.1
#=GS A0A1W1HG58_9DELT/153-319    AC A0A1W1HG58.1
#=GS A0A1M6LQZ7_9CLOT/343-511    AC A0A1M6LQZ7.1
#=GS A0A1C7AFQ3_9GAMM/141-308    AC A0A1C7AFQ3.1
#=GS A0A1R4HHH1_9GAMM/136-303    AC A0A1R4HHH1.1
#=GS W3TXN4_BARQI/142-305        AC W3TXN4.1
#=GS D6Z1P1_DESAT/140-306        AC D6Z1P1.1
#=GS G8MHE7_9BURK/125-294        AC G8MHE7.1
#=GS Q81ZE3_BACAN/148-316        AC Q81ZE3.1
#=GS A0A1E5BT92_9GAMM/149-315    AC A0A1E5BT92.1
#=GS Q1D0K5_MYXXD/306-472        AC Q1D0K5.1
#=GS A0A1X1QF53_9GAMM/136-303    AC A0A1X1QF53.1
#=GS A0A074LXG6_9BACL/98-266     AC A0A074LXG6.1
#=GS A0A0F5JG90_9BACT/132-298    AC A0A0F5JG90.1
#=GS A9CEZ3_AGRFC/145-313        AC A9CEZ3.1
#=GS A0A0A2UZE7_9BACI/368-536    AC A0A0A2UZE7.1
#=GS A0A1W6MQ63_9RHIZ/138-305    AC A0A1W6MQ63.1
#=GS A0A1S6HTU0_9GAMM/134-301    AC A0A1S6HTU0.1
#=GS A0A1E4V5A3_9PSED/131-297    AC A0A1E4V5A3.1
#=GS D7B6Y7_NOCDD/170-252        AC D7B6Y7.1
#=GS A0A1G7R3C7_9FLAO/142-309    AC A0A1G7R3C7.1
#=GS K6U7X7_9CLOT/161-337        AC K6U7X7.1
#=GS Q3J9X1_NITOC/143-310        AC Q3J9X1.1
#=GS A0A1W6LI88_9BURK/296-464    AC A0A1W6LI88.1
#=GS A0A0Q3TAU1_9BACI/141-308    AC A0A0Q3TAU1.1
#=GS X6GP85_9RHIZ/146-313        AC X6GP85.1
#=GS A0A1M5YWN2_9FIRM/326-495    AC A0A1M5YWN2.1
#=GS A0A1I2DJW5_9FIRM/226-394    AC A0A1I2DJW5.1
#=GS A0A0Q5CZF1_9RHIZ/138-305    AC A0A0Q5CZF1.1
#=GS C8WT15_ALIAD/138-287        AC C8WT15.1
#=GS A0A127JP60_9BURK/171-339    AC A0A127JP60.1
#=GS A0A098R2F1_9SPIO/207-374    AC A0A098R2F1.1
#=GS A0A0J6T366_9RHIZ/139-306    AC A0A0J6T366.1
#=GS A4BJ92_9GAMM/9-176          AC A4BJ92.1
#=GS A0A1U9JKI0_9NEIS/165-332    AC A0A1U9JKI0.1
#=GS Q9KE65_BACHD/153-321        AC Q9KE65.1
#=GS B8J2L7_DESDA/143-310        AC B8J2L7.1
#=GS R6BT77_9BACT/153-320        AC R6BT77.1
#=GS A0A0F3RQI7_ORITS/141-207    AC A0A0F3RQI7.1
#=GS A0A1V2SGL3_9BACI/140-291    AC A0A1V2SGL3.1
#=GS A0A2A2F9A2_9GAMM/141-308    AC A0A2A2F9A2.1
#=GS A0A1Y6D039_9GAMM/188-353    AC A0A1Y6D039.1
#=GS A0A1Q9GEQ4_9GAMM/292-460    AC A0A1Q9GEQ4.1
#=GS A0A1H0QE01_9DELT/154-321    AC A0A1H0QE01.1
#=GS A0A0U9HE35_9THEO/311-478    AC A0A0U9HE35.1
#=GS G7M941_9CLOT/79-253         AC G7M941.1
#=GS A0A126QLE4_9DELT/222-389    AC A0A126QLE4.1
#=GS A0A1G3UBZ1_9HELI/134-301    AC A0A1G3UBZ1.1
#=GS C1DDK3_AZOVD/158-326        AC C1DDK3.1
#=GS A0A1Q6DM91_9DELT/142-309    AC A0A1Q6DM91.1
#=GS A0A2G1QL99_9RHIZ/150-317    AC A0A2G1QL99.1
#=GS A0A0A8WV21_9DELT/149-316    AC A0A0A8WV21.1
#=GS E3FTF6_STIAD/302-468        AC E3FTF6.1
#=GS A0A1T5L3L8_9CLOT/161-328    AC A0A1T5L3L8.1
#=GS S6ADC4_9PROT/6-173          AC S6ADC4.1
#=GS A0A1H9T594_9BACI/164-328    AC A0A1H9T594.1
#=GS A7HV61_PARL1/120-287        AC A7HV61.1
#=GS A0A080MEP2_9PROT/138-305    AC A0A080MEP2.1
#=GS I0AIL0_IGNAJ/269-436        AC I0AIL0.1
#=GS A0A1I7KKI3_9BURK/144-311    AC A0A1I7KKI3.1
#=GS A0A1I0ZAR8_9BACI/246-415    AC A0A1I0ZAR8.1
#=GS A0A1G9G1W2_9DELT/149-316    AC A0A1G9G1W2.1
#=GS F9ZB38_ODOSD/13-180         AC F9ZB38.1
#=GS A0A0R0CKY4_9GAMM/154-321    AC A0A0R0CKY4.1
#=GS A0A1M5HZB7_9FLAO/143-310    AC A0A1M5HZB7.1
#=GS A0A0J7MSC6_LASNI/303-468    AC A0A0J7MSC6.1
#=GS A0A017RVB4_9CLOT/338-506    AC A0A017RVB4.1
#=GS A0A1J0TH50_9ALTE/141-308    AC A0A1J0TH50.1
#=GS C3K8C1_PSEFS/31-197         AC C3K8C1.1
#=GS A0A0Q5MRG0_9BURK/148-315    AC A0A0Q5MRG0.1
#=GS A0A1I2BFZ9_9BACI/110-278    AC A0A1I2BFZ9.1
#=GS A0A0F4LII2_9LACO/77-251     AC A0A0F4LII2.1
#=GS Q2RKJ6_MOOTA/320-488        AC Q2RKJ6.1
#=GS A0A1Q3RGI5_9FIRM/158-326    AC A0A1Q3RGI5.1
#=GS A0A1X1QLP2_9GAMM/143-310    AC A0A1X1QLP2.1
#=GS A0A1H4HMS0_9BURK/194-361    AC A0A1H4HMS0.1
#=GS A0A261S1V0_9BORD/139-306    AC A0A261S1V0.1
#=GS A0A1Q8QTP9_9DELT/49-216     AC A0A1Q8QTP9.1
#=GS A0A0F4PCI9_PSEO7/127-294    AC A0A0F4PCI9.1
#=GS S3VIQ2_9LEPT/458-625        AC S3VIQ2.1
#=GS C4XQZ8_DESMR/191-339        AC C4XQZ8.1
#=GS W9GYM8_9PROT/340-509        AC W9GYM8.1
#=GS A0A0A7EJ64_9GAMM/141-308    AC A0A0A7EJ64.1
#=GS A9FLX9_SORC5/138-305        AC A9FLX9.1
#=GS A0A2C6DBP0_9GAMM/217-384    AC A0A2C6DBP0.1
#=GS A0A239CGJ2_9FIRM/120-293    AC A0A239CGJ2.1
#=GS A0A0C1XRK4_9CYAN/17-184     AC A0A0C1XRK4.1
#=GS A0A1I5MIM0_9SPHN/142-305    AC A0A1I5MIM0.1
#=GS S2Y836_9BACL/370-538        AC S2Y836.1
#=GS A0A1M6F1B2_9FIRM/335-503    AC A0A1M6F1B2.1
#=GS A0A1E2UY47_9GAMM/165-332    AC A0A1E2UY47.1
#=GS A0A1G5A892_9BURK/185-355    AC A0A1G5A892.1
#=GS A0A1I6M857_9RHOB/146-298    AC A0A1I6M857.1
#=GS A0A0Q3WE41_BRECH/153-319    AC A0A0Q3WE41.1
#=GS A0A127F465_9RHIZ/119-286    AC A0A127F465.1
#=GS U2ZW83_VIBPR/142-309        AC U2ZW83.1
#=GS H1D3R4_9FUSO/134-301        AC H1D3R4.1
#=GS R7HQW2_9BACT/144-311        AC R7HQW2.1
#=GS A0A1A9F3G0_9GAMM/149-316    AC A0A1A9F3G0.1
#=GS A0A0A2HZ51_9DELT/207-374    AC A0A0A2HZ51.1
#=GS A0A0U9HDM3_9THEO/257-424    AC A0A0U9HDM3.1
#=GS A0A1F3SU44_9PROT/147-314    AC A0A1F3SU44.1
#=GS A0A1H7IYQ7_9SPHI/142-309    AC A0A1H7IYQ7.1
#=GS A0A1I3X5W3_9BACL/139-307    AC A0A1I3X5W3.1
#=GS A0A2C9CQP6_9RHOB/148-303    AC A0A2C9CQP6.1
#=GS A0A0C2DRZ3_9DELT/145-312    AC A0A0C2DRZ3.1
#=GS A0A166KAM1_9GAMM/135-302    AC A0A166KAM1.1
#=GS A0A120D510_9BACT/165-332    AC A0A120D510.1
#=GS G7W5T0_DESOD/283-451        AC G7W5T0.1
#=GS A0A1G0LUL4_9DELT/156-322    AC A0A1G0LUL4.1
#=GS A0A1H8L8C1_9FLAO/146-313    AC A0A1H8L8C1.1
#=GS D6Z3F2_DESAT/144-311        AC D6Z3F2.1
#=GS A0A0M9GE10_9PSED/133-299    AC A0A0M9GE10.1
#=GS A1SZE8_PSYIN/317-485        AC A1SZE8.1
#=GS J3CAU2_9BURK/148-315        AC J3CAU2.1
#=GS A0A1F8QU72_9CHLR/141-308    AC A0A1F8QU72.1
#=GS A0A1T4SKC3_9FIRM/320-488    AC A0A1T4SKC3.1
#=GS A0A101M6H5_9GAMM/141-308    AC A0A101M6H5.1
#=GS A0A1Y4WGG6_9FIRM/145-313    AC A0A1Y4WGG6.1
#=GS N6WRL4_9ALTE/317-484        AC N6WRL4.1
#=GS A9GA77_SORC5/1407-1574      AC A9GA77.1
#=GS A0A227P2P8_9FLAO/217-384    AC A0A227P2P8.1
#=GS A0A176Z304_9BRAD/134-300    AC A0A176Z304.1
#=GS A0A0W8EFC3_9BACT/139-306    AC A0A0W8EFC3.1
#=GS A0A0R2HXV6_CARDV/76-252     AC A0A0R2HXV6.1
#=GS Q1PYM7_KUEST/147-316        AC Q1PYM7.1
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