GenomeNet

Database: Pfam
Entry: Yopt
LinkDB: Yopt
Original site: Yopt 
#=GF ID   Yopt
#=GF AC   PF09467.15
#=GF DE   Hypothetical protein Yopt
#=GF AU   Coggill P;0000-0001-5731-1588
#=GF SE   pdb_2dlb
#=GF GA   25.50 25.50;
#=GF TC   25.50 167.00;
#=GF NC   24.80 25.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 81514348 -E 1000 HMM pfamseq
#=GF TP   Domain
#=GF DR   INTERPRO; IPR018572;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This hypothetical protein is expressed in bacteria, particularly
#=GF CC   Bacillus subtilis. It forms homo-dimers, with each monomer
#=GF CC   consisting of one alpha helix and three beta strands.
#=GF SQ   5
#=GS A0A7G5CIU2_9CAUD/2-72  AC A0A7G5CIU2.1
#=GS YOPT_BACSU/2-72        AC O34498.1
#=GS YOPT_BACSU/2-72        DR PDB; 2DLB B; 4002-4071;
#=GS YOPT_BACSU/2-72        DR PDB; 2DLB A; 2002-2071;
#=GS A0A7G5CIB4_9CAUD/2-72  AC A0A7G5CIB4.1
#=GS A0A7G5CHU0_9CAUD/2-72  AC A0A7G5CHU0.1
#=GS O64103_BPSPB/2-72      AC O64103.1
A0A7G5CIU2_9CAUD/2-72             AGYLNNIELNLEIVLKNKADSPEVSETLVTRICENLLLSKEVSFLKADGSVENFKLSDMEYEITNTEELPE
YOPT_BACSU/2-72                   AGYLNNIALNLEIVLKNKADSPEVSETLVTRICENLLLSKEVSFLKADGSVENFKLSDMEYEITNTEELPE
#=GR YOPT_BACSU/2-72        SS    -EEEEEEEEEEEEEEEEE-SSHHHHHHHHHHHHHTTTT-SEEEEE-TTS-EEEEEEEEEEEEEEEEEE--X
A0A7G5CIB4_9CAUD/2-72             AGYLNNIELNLEIVLKNKADSPEVSETLVTRICENLLLSKEVSFLKADGSVENFKLSDMEYEITNTEELPE
A0A7G5CHU0_9CAUD/2-72             AGYLNNIALNLEIVLKNKADSPEVSETLVTRICENLLLSKEVSFLKADGSVENFKLSDMEYEITNTEELPE
O64103_BPSPB/2-72                 AGYLNNIALNLEIVLKNKADSPEVSETLVTRICENLLLSKEVSFLKADGSVENFKLSDMEYEITNTEELPE
#=GC SS_cons                      -EEEEEEEEEEEEEEEEE-SSHHHHHHHHHHHHHTTTT-SEEEEE-TTS-EEEEEEEEEEEEEEEEEE--X
#=GC seq_cons                     AGYLNNIALNLEIVLKNKADSPEVSETLVTRICENLLLSKEVSFLKADGSVENFKLSDMEYEITNTEELPE
//
DBGET integrated database retrieval system