GenomeNet

Database: Pfam
Entry: partial_CstF
LinkDB: partial_CstF
Original site: partial_CstF 
#=GF ID   partial_CstF
#=GF AC   PF15861.5
#=GF DE   Partial cleavage stimulation factor domain
#=GF AU   Coggill P;0000-0001-5731-1588
#=GF SE   Woodcroft B
#=GF GA   27.00 27.00;
#=GF TC   32.60 31.70;
#=GF NC   26.20 25.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 45638612 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Partial_cleavage_stimulation_factor_domain
#=GF DR   INTERPRO; IPR031721;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   Partial_CstF domain is a protein domain that occurs in proteins
#=GF CC   from apicomplexan parasites. Currently (as of 2012), little is
#=GF CC   known about the function of this domain. However, it is
#=GF CC   homologous to the amino-terminal part of the cleavage
#=GF CC   stimulation factor, which is thought to be involved with mRNA
#=GF CC   maturation in mammals.
#=GF SQ   76
#=GS A0A2C6KY19_9APIC/2016-2073  AC A0A2C6KY19.1
#=GS U6MKR6_9EIME/303-362        AC U6MKR6.1
#=GS A0A1B1DWK4_9APIC/711-772    AC A0A1B1DWK4.1
#=GS A5KEB3_PLAVS/657-718        AC A5KEB3.1
#=GS A0A0L7KC05_PLAFX/696-757    AC A0A0L7KC05.1
#=GS A0A122HY82_PLABE/503-564    AC A0A122HY82.1
#=GS A0A1A8WQ02_PLAMA/797-858    AC A0A1A8WQ02.1
#=GS A0A024VSJ0_PLAFA/696-757    AC A0A024VSJ0.1
#=GS Q5CSU2_CRYPI/239-302        AC Q5CSU2.1
#=GS A0A024W7P4_PLAFA/698-759    AC A0A024W7P4.1
#=GS Q4U9B8_THEAN/261-330        AC Q4U9B8.1
#=GS A0A0D9QJ13_PLAFR/665-726    AC A0A0D9QJ13.1
#=GS W4J2U4_PLAFP/796-857        AC W4J2U4.1
#=GS A0A061D5P5_BABBI/340-401    AC A0A061D5P5.1
#=GS W4IGM6_PLAFA/696-757        AC W4IGM6.1
#=GS A0A1J4MK40_9CRYT/246-307    AC A0A1J4MK40.1
#=GS F0VCP6_NEOCL/659-716        AC F0VCP6.1
#=GS Q4N217_THEPA/296-365        AC Q4N217.1
#=GS B9QGP7_TOXGV/553-611        AC B9QGP7.1
#=GS V4Z4D5_TOXGV/1058-1118      AC V4Z4D5.1
#=GS A0A2A9MB93_9APIC/939-998    AC A0A2A9MB93.1
#=GS A0A0L0CW10_PLAFA/698-759    AC A0A0L0CW10.1
#=GS F0V9F4_NEOCL/1089-1149      AC F0V9F4.1
#=GS A0A024VKZ8_PLAFA/482-543    AC A0A024VKZ8.1
#=GS W4J437_PLAFP/696-757        AC W4J437.1
#=GS W7K4L7_PLAFO/771-832        AC W7K4L7.1
#=GS A0A1A8VWW1_PLAMA/1045-1106  AC A0A1A8VWW1.1
#=GS A0A1B1DXQ3_9APIC/613-674    AC A0A1B1DXQ3.1
#=GS A0A1Y1JF74_PLAGO/1056-1117  AC A0A1Y1JF74.1
#=GS A0A0D9QHX1_PLAFR/734-795    AC A0A0D9QHX1.1
#=GS W7FL31_PLAF8/767-828        AC W7FL31.1
#=GS A0A0L1IEE1_PLAFA/759-820    AC A0A0L1IEE1.1
#=GS A0A2C6KL06_9APIC/721-779    AC A0A2C6KL06.1
#=GS A0A1J1H6C0_PLARL/855-916    AC A0A1J1H6C0.1
#=GS L0B2K4_THEEQ/276-338        AC L0B2K4.1
#=GS Q8IJB9_PLAF7/771-832        AC Q8IJB9.1
#=GS W7JNV1_PLAFA/697-758        AC W7JNV1.1
#=GS J4CDZ2_THEOR/262-334        AC J4CDZ2.1
#=GS W7JXI0_PLAFA/796-857        AC W7JXI0.1
#=GS Q8I0W1_PLAF7/697-758        AC Q8I0W1.1
#=GS A0A024WQ60_PLAFA/697-758    AC A0A024WQ60.1
#=GS A0A074SPU0_HAMHA/554-612    AC A0A074SPU0.1
#=GS U6L041_EIMTE/879-936        AC U6L041.1
#=GS Q7RAS3_PLAYO/1-24           AC Q7RAS3.1
#=GS A0A1A8YRW2_9APIC/642-702    AC A0A1A8YRW2.1
#=GS A0A077X8W5_PLACH/521-582    AC A0A077X8W5.1
#=GS A0A1A8YP14_9APIC/918-979    AC A0A1A8YP14.1
#=GS A0A0L1I7P6_PLAFA/699-760    AC A0A0L1I7P6.1
#=GS A0A1A8VU85_9APIC/611-671    AC A0A1A8VU85.1
#=GS Q4Z0N9_PLABA/417-478        AC Q4Z0N9.1
#=GS A0A077TQ85_PLACH/630-691    AC A0A077TQ85.1
#=GS B3L247_PLAKH/780-841        AC B3L247.1
#=GS A0A1Y1JGD4_PLAGO/915-976    AC A0A1Y1JGD4.1
#=GS W7JVA1_PLAFO/697-758        AC W7JVA1.1
#=GS A0A024V6W2_PLAFA/696-757    AC A0A024V6W2.1
#=GS Q4YY76_PLABA/33-94          AC Q4YY76.1
#=GS K6UCV2_9APIC/830-891        AC K6UCV2.1
#=GS A0A024UWM0_PLAFA/586-647    AC A0A024UWM0.1
#=GS A0A1J1H7Z1_PLARL/660-721    AC A0A1J1H7Z1.1
#=GS Q7RDB2_PLAYO/605-666        AC Q7RDB2.1
#=GS W7A3H1_9APIC/802-863        AC W7A3H1.1
#=GS A0A1R4AAZ0_BABMR/140-201    AC A0A1R4AAZ0.1
#=GS A0A113RJC0_PLABE/661-722    AC A0A113RJC0.1
#=GS Q4XL91_PLACH/630-691        AC Q4XL91.1
#=GS W7FCU9_PLAF8/696-757        AC W7FCU9.1
#=GS A0A1A8VLU9_9APIC/869-930    AC A0A1A8VLU9.1
#=GS A0A2A9M8A4_9APIC/597-655    AC A0A2A9M8A4.1
#=GS Q4XUS4_PLACH/428-489        AC Q4XUS4.1
#=GS A0A1X1BL50_9APIC/388-437    AC A0A1X1BL50.1
#=GS B6AGT9_CRYMR/248-311        AC B6AGT9.1
#=GS A5KE07_PLAVS/635-696        AC A5KE07.1
#=GS K6UJF6_9APIC/400-461        AC K6UJF6.1
#=GS B3L305_PLAKH/756-817        AC B3L305.1
#=GS W7A6F1_9APIC/772-832        AC W7A6F1.1
#=GS A0A074TQE8_HAMHA/1132-1192  AC A0A074TQE8.1
#=GS W4IHD3_PLAFA/609-670        AC W4IHD3.1
A0A2C6KY19_9APIC/2016-2073             ..........pp------L.SSIQPAPESLVEEVIKSPD..ILSNILNSRWSDMQEWPEEQRRQVLALQ..........AALIRRG-f
U6MKR6_9EIME/303-362                   ....lseeeara-------.---PPAAEALIEELLRSQG..LLEKVLHITHAEVARLEPQHRQQIFSLR..........RALRARGL.
A0A1B1DWK4_9APIC/711-772               ............KKVNMSL.KDIPYAEEDLVKEVINEKP..ILENILISKYADMVNWNRDQVLRVLSIR..........KSLKSRGY.
A5KEB3_PLAVS/657-718                   .........vlt---DPTY.ANVELPDDELVNEVVKNSD..ILNNILKSRVEDMKSWSTEQRVQVLSIQ..........KALQLKGY.
A0A0L7KC05_PLAFX/696-757               ..........vv--LDDIY.KNIDLPDEELVNEVIKNTD..ILNNILKSKIENMKLWNNEQRIQVLSIQ..........KALQLKGY.
A0A122HY82_PLABE/503-564               ...........e-KINLTI.NAIPEAEEQLVKEVINQKD..ILQNILASKYSDMLKWNNEQALRVLSLR..........KSLKKKGY.
A0A1A8WQ02_PLAMA/797-858               ..........ac--IDSLY.ANVDLPDEDLVNEVIKNED..ILNNILKSKIQDMKNWNSEQRMQVLSIQ..........KALQLKGY.
A0A024VSJ0_PLAFA/696-757               ..........vv--LDDIY.KNIDLPDEELVNEVIKNTD..ILNNILKSKIENMKLWNNEQRIQVLSIQ..........KALQLKGY.
Q5CSU2_CRYPI/239-302                   .........ens---NINI.KNLGEDVSVLIEEIANNPNpaLLQALASIQPNSVAQWTEEEKSKILAIQ..........QALKNRGL.
A0A024W7P4_PLAFA/698-759               ..........vv--LDDIY.KNIDLPDEELVNEVIKNTD..ILNNILKSKIENMKLWNNEQRIQVLSIQ..........KALQLKGY.
Q4U9B8_THEAN/261-330                   ............KDIDDLMnSGIYPASAALVDEVIKNND..ILTHIQKANMVEMNSWPPEQKQQVLSIKvvs...kvvvKSIFRRFI.
A0A0D9QJ13_PLAFR/665-726               ..........vl--SDPTY.ANVELPDDELVNEVVKNRD..ILNNILKSRVEDMKSWSTEQRVQVLSIQ..........KALQLKGY.
W4J2U4_PLAFP/796-857                   ............KKLKISL.KDIPYAEEDLVKEIINEKS..ILQNILISKYVDMLNWTSEQVLRVLSIR..........KSLKRIGY.
A0A061D5P5_BABBI/340-401               ..........tt--IEQLI.KEVQPAPPILVEEVLKNTE..ILTNIQRATLAEMQSWPAEQRLQVMSIK..........LALHYRGI.
W4IGM6_PLAFA/696-757                   ..........vv--LDDIY.KNIDLPDEELVNEVIKNTD..ILNNILKSKIENMKLWNNEQRIQVLSIQ..........KALQLKGY.
A0A1J4MK40_9CRYT/246-307               tsinikslggdi-------.-------SVLIEDIASNPNpaLLQALASIQPNSVAQWTEEEKSKILAIQ..........QVLKNRGL.
F0VCP6_NEOCL/659-716                   ........hpal-------.-AVPPASDALVDEVLKSPD..ILSNVLGSTPSAMRDWPEEQRQQVLALQ..........SALLRRG-f
Q4N217_THEPA/296-365                   ............KDIDDLMnSGVYPASAPLVDAVIKNND..LLTNIQKATREEMTSWPAEQKQQVLSIKvvs...iyvlKYYFRRFI.
B9QGP7_TOXGV/553-611                   .......qhpal-------.-AVPPAPDALVEEVLKSPD..ILTNVLNSRPTTMQDWPQEQRQQVLALQ..........SALLRRGY.
V4Z4D5_TOXGV/1058-1118                 ......avlale-------.AAVEEAAPALVDEVMRVPT..MLRNILTAPALQMLQWGEAERRQVLSIR..........KALRKRGC.
A0A2A9MB93_9APIC/939-998               .......ilsqe-------.AAVEEAPAALVDEVMRVPA..MLRNILTAQASQMLQWNEAQRRQVLSIR..........KALRQRGC.
A0A0L0CW10_PLAFA/698-759               ..........vv--LDDIY.KNIDLPDEELVNEVIKNTD..ILNNILKSKIENMKLWNNEQRIQVLSIQ..........KALQLKGY.
F0V9F4_NEOCL/1089-1149                 ......iilaqe-------.TAVEEAAPALVDEVMRVPA..MLRNILTAQSMQMLQWGETERRQVLSIR..........KALRKRGC.
A0A024VKZ8_PLAFA/482-543               ............KKLKISL.KDIPYAEEDLVKEIINEKS..ILQNILISKYVDMLNWTSEQVLRVLSIR..........KSLKRIGY.
W4J437_PLAFP/696-757                   ..........vv--LDDIY.KNIDLPDEELVNEVIKNTD..ILNNILKSKIENMKLWNNEQRIQVLSIQ..........KALQLKGY.
W7K4L7_PLAFO/771-832                   ............KKLKISL.KDIPYAEEDLVKEIINEKS..ILQNILISKYVDMLNWTSEQVLRVLSIR..........KSLKRIGY.
A0A1A8VWW1_PLAMA/1045-1106             ...........n-KLKVTL.NDIPHAEEDLIKEVINQKS..ILRNILKSKYADMLNWSNEQILRVLSIR..........KSLRSQG-h
A0A1B1DXQ3_9APIC/613-674               ..........vl--SDPTY.ANVELPDEELVNEVMKNRD..ILNNILKSRVEDMKGWSSEQRVQVLSIQ..........KALQLKGY.
A0A1Y1JF74_PLAGO/1056-1117             ............NKINLTL.NEIPYADEDLLKEIIKQKP..ILQNILIIKYSDMVNWSKEQILRVLSIR..........KTLKSRGY.
A0A0D9QHX1_PLAFR/734-795               ............KKVNVTL.KDIPFAEDDLVNEVINEKP..ILENILISKYPDMLNWNQEQILRVLSIR..........KSLKRRGY.
W7FL31_PLAF8/767-828                   ............KKLKISL.KDIPYAEEDLVKEIINEKS..ILQNILISKYVDMLNWTSEQVLRVLSIR..........KSLKRIGY.
A0A0L1IEE1_PLAFA/759-820               ............KKLKISL.KDIPYAEEDLVKEIINEKS..ILQNILISKYVDMLNWTSEQVLRVLSIR..........KSLKRIGY.
A0A2C6KL06_9APIC/721-779               .......laeea-------.-TVQEASPALVDEVIRVPA..MLHNILTAKAECILQWNSEQRQQVLSIR..........KALRQRG-f
A0A1J1H6C0_PLARL/855-916               ...........n-KLKISL.NNIPNADEDLLNEIINQKS..ILQNIIVSKYTDMLNWPNEQILRVLSIR..........KSLKNKGY.
L0B2K4_THEEQ/276-338                   ..........ps--IEDLMsQGVHPASAVLVEEVLKNTE..ILTNIQRATLAEMESWPKEQKQQVLAIK..........VALHLRGI.
Q8IJB9_PLAF7/771-832                   ............KKLKISL.KDIPYAEEDLVKEIINEKS..ILQNILISKYVDMLNWTSEQVLRVLSIR..........KSLKRIGY.
W7JNV1_PLAFA/697-758                   ..........vv--LDDIY.KNIDLPDEELVNEVIKNTD..ILNNILKSKIENMKLWNNEQRIQVLSIQ..........KALQLKGY.
J4CDZ2_THEOR/262-334                   ...........a-EIEELMnQGIYPASAALVDEVIKNPE..ILTNIQKATRQEMTSWPEEQKQQVLSIKivrnvvdidtQALHMRGI.
W7JXI0_PLAFA/796-857                   ............KKLKISL.KDIPYAEEDLVKEIINEKS..ILQNILISKYVDMLNWTSEQVLRVLSIR..........KSLKRIGY.
Q8I0W1_PLAF7/697-758                   ..........vv--LDDIY.KNIDLPDEELVNEVIKNTD..ILNNILKSKIENMKLWNNEQRIQVLSIQ..........KALQLKGY.
A0A024WQ60_PLAFA/697-758               ..........vv--LDDIY.KNIDLPDEELVNEVIKNTD..ILNNILKSKIENMKLWNNEQRIQVLSIQ..........KALQLKGY.
A0A074SPU0_HAMHA/554-612               .......qhpal-------.-AVPPAPDALVEEVLKSPD..ILTNVLNSRPSAMQDWPQEQRQQVLALQ..........SALLRRGY.
U6L041_EIMTE/879-936                   ......eeeara-------.---PPAAEALIDELLRSQG..LLEKVLHITHAEMAHLEPQHRQQIFSLR..........RALRARGL.
Q7RAS3_PLAYO/1-24                      ............-------.-------------------..------------MKNWSDEQRIQVLSIQ..........KALQLKGY.
A0A1A8YRW2_9APIC/642-702               .......heasp------Y.ADVDLPDDELVNEVIKNTD..ILNNILKSKAEDMRNWSDEQRIQVLSIQ..........KALQLKGY.
A0A077X8W5_PLACH/521-582               ...........e-KINLTI.SAIPEAEEKLVKEVINQKD..ILQNILASKYPDMLKWNNEQLLRVLSLR..........KSLKKKGY.
A0A1A8YP14_9APIC/918-979               ..........hk--LRITL.NNIPEADDDLVKEVINEKP..ILENILISKYSDMLNWSDEQILRVLSIR..........KSLKRRGY.
A0A0L1I7P6_PLAFA/699-760               ..........vv--LDDIY.KNIDLPDEELVNEVIKNTD..ILNNILKSKIENMKLWNNEQRIQVLSIQ..........KALQLKGY.
A0A1A8VU85_9APIC/611-671               .......heasp------Y.ADVDLPDDELVNEVIKNTD..ILNNILKSKAEDMRNWSDEQRIQVLSIQ..........KALQLKGY.
Q4Z0N9_PLABA/417-478                   ...........e-KINLTI.NAIPEAEEQLVKEVINQKD..ILQNILASKYSDMLKWNNEQALRVLSLR..........KSLKKKGY.
A0A077TQ85_PLACH/630-691               ..........ii--LDPIY.DTVDTPDDELVNVIIKDPN..ILKNILRSKIEDMKNWSDAQRTQVLSIQ..........KALQLKGY.
B3L247_PLAKH/780-841                   ............KKVNLSL.KDIPYAEDDLVKEVINEKP..ILENLLISKYSDMANWNPDQILRVLSIR..........KSLKRRGY.
A0A1Y1JGD4_PLAGO/915-976               .........ile---DPIY.ANIELPDEELVNEVMKNQD..IMNNILKSKVEDMKTWNHEQRVQVISIQ..........KALLLKGY.
W7JVA1_PLAFO/697-758                   ..........vv--LDDIY.KNIDLPDEELVNEVIKNTD..ILNNILKSKIENMKLWNNEQRIQVLSIQ..........KALQLKGY.
A0A024V6W2_PLAFA/696-757               ..........vv--LDDIY.KNIDLPDEELVNEVIKNTD..ILNNILKSKIENMKLWNNEQRIQVLSIQ..........KALQLKGY.
Q4YY76_PLABA/33-94                     ..........ii--LDPIY.DTVDIPDDELVNVIIKDTN..ILKNILRSKIEDMKNWSDEQRIQVLSIQ..........KALQLKGY.
K6UCV2_9APIC/830-891                   ............KKVNLSL.KDIPYAEEDLVKEVINEKP..ILENILISKYSDMANWNRDQVLRVLSIR..........KSLKSRGY.
A0A024UWM0_PLAFA/586-647               ............KKLKISL.KDIPYAEEDLVKEIINEKS..ILQNILISKYVDMLNWTSEQVLRVLSIR..........KSLKRIGY.
A0A1J1H7Z1_PLARL/660-721               ..........iy--LNEIY.SNIELPDDALVNEVIKNTD..ILNNILKSKIEDMKNWNNEQKIQVLSIQ..........KALLLKGY.
Q7RDB2_PLAYO/605-666                   ...........e-KINLTI.NEIPEAEEQLIKEVINQKD..ILQNILASKYQDMLKWNNEQTLRVLSLR..........KSLKKKGY.
W7A3H1_9APIC/802-863                   ..........rk--VNLGL.KDIPYAEEDLVKEVINEKP..ILENILISKYSDMVNWNRDQILRVLSIR..........KSLKSRGY.
A0A1R4AAZ0_BABMR/140-201               .........sep---TDIF.HNIVPAPKALVDEVLKNKE..ILTNIQNATKAEMDTWPQEQRAQVMSIK..........AALKIRGY.
A0A113RJC0_PLABE/661-722               ..........ii--LDPIY.DTVDIPDDELVNVIIKDTN..ILKNILRSKIEDMKNWSDEQRIQVLSIQ..........KALQLKGY.
Q4XL91_PLACH/630-691                   ..........ii--LDPIY.DTVDTPDDELVNVIIKDPN..ILKNILRSKIEDMKNWSDAQRTQVLSIQ..........KALQLKGY.
W7FCU9_PLAF8/696-757                   ..........vv--LDDIY.KNIDLPDEELVNEVIKNTD..ILNNILKSKIENMKLWNNEQRIQVLSIQ..........KALQLKGY.
A0A1A8VLU9_9APIC/869-930               ...........h-KLKISL.NNIPEADDDLVKEVINEKP..ILQNILISKYSDMLNWSDEQILRVLSIR..........KSLKRRGY.
A0A2A9M8A4_9APIC/597-655               .......qhpaf-------.-AVPPAPDTLVDEVLKSPD..ILANVLNSKHSTMRSWPPEQRRQVLALQ..........SALLRRG-f
Q4XUS4_PLACH/428-489                   ...........e-KINLTI.SAIPEAEEKLVKEVINQKD..ILQNILASKYPDMLKWNNEQLLRVLSLR..........KSLKKKGY.
A0A1X1BL50_9APIC/388-437               ...........k-AIEEML.KEVQPAPQALVDEVLKHTE..ILTNIQRASLFEMQSWPPEQRLQ-----..........--------s
B6AGT9_CRYMR/248-311                   ............NHISVAI.SGTSNDVSALIEEIMNNPNpaLVQALASIQPDHVTQWTSEEKAKILAIQ..........QILRNRGL.
A5KE07_PLAVS/635-696                   ............KKVNLSL.KDIPFAEEELVKEVINEKP..ILENILISKYADMASWNREQVLRVLSIR..........KSLKSRGY.
K6UJF6_9APIC/400-461                   ..........vl--SDPTY.ANVELPDDELVNEVVKNRD..ILNNILKSRVEDMKSWSTEQRVQVLSIQ..........KALQLKGY.
B3L305_PLAKH/756-817                   ..........vl--SDPTY.ANVELPDEELVNEVEKNRD..ILNNILKSRVEDMKSWSTEQRLQVLSIQ..........KALQLKGY.
W7A6F1_9APIC/772-832                   .........lsh----PTY.ANVEVADDELVNEVVKNKD..ILNNILKSRVEDMTSWSNEQRVQVLSIQ..........KALQLKGY.
A0A074TQE8_HAMHA/1132-1192             ......avlale-------.AAVEEAAPALVDEVMRVPT..MLRNILTAPAMQMLQWGEAERRQVLSIR..........KALRKRGC.
W4IHD3_PLAFA/609-670                   ............KKLKISL.KDIPYAEEDLVKEIINEKS..ILQNILISKYVDMLNWTSEQVLRVLSIR..........KSLKRIGY.
#=GC seq_cons                          ..............lp..h.psls.s---LVpEVI+sps..ILpNILpSKhp-MtsWssEQ+lQVLSIp..........KALph+GY.
//
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