KEGG   Plasmodium falciparum 3D7: PF3D7_0909800
Entry
PF3D7_0909800     CDS       T00095                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3, putative
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
pfa  Plasmodium falciparum 3D7
Pathway
pfa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PF3D7_0909800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfa03019]
    PF3D7_0909800
   03041 Spliceosome [BR:pfa03041]
    PF3D7_0909800
   03032 DNA replication proteins [BR:pfa03032]
    PF3D7_0909800
Messenger RNA biogenesis [BR:pfa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     PF3D7_0909800
Spliceosome [BR:pfa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    PF3D7_0909800
  U2 snRNP components
    PF3D7_0909800
 Complex B
  U1 snRNP components
    PF3D7_0909800
  U4/U6.U5 tri-snRNP components
    PF3D7_0909800
 Complex C
  U2 snRNP components
    PF3D7_0909800
DNA replication proteins [BR:pfa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     PF3D7_0909800
SSDB
Motif
Pfam: LSM SM-ATX LSM14
Other DBs
NCBI-GeneID: 813375
NCBI-ProteinID: XP_002808925
PlasmoDB: PF3D7_0909800
UniProt: C0H529
Position
9:join(445788..445883,445970..446050,446156..446329)
AA seq 116 aa
MSVGIPIKLLHEGIGHTISVETKSGILYRGTLLFAEDNMNCLLENVSVVKKDGKQILLEQ
VYIRGGSVSFMIFPDMLRYAPIFKINKSKAKTNFTTIRRAMEAHARIASKNKDLKA
NT seq 351 nt   +upstreamnt  +downstreamnt
atgtcagttggaataccaataaagttattacatgagggaataggtcataccatatctgtt
gaaacaaaatcgggaattttatatagaggcacattgctttttgcagaggataacatgaat
tgtttacttgaaaatgtatcagtagtaaaaaaagatggcaaacaaatcttattggaacaa
gtatatataagaggtggtagcgtgtcattcatgatatttccagatatgttgagatatgct
cctatatttaaaattaataaatccaaagcaaaaactaattttacaaccataagaagagca
atggaagctcatgctagaattgcatcaaaaaataaagacttaaaagcatag

  All links  
Gene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PLASMODB (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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