KEGG   Plasmodium falciparum 3D7: PF3D7_1027400
Entry
PF3D7_1027400     CDS       T00095                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7, putative
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pfa  Plasmodium falciparum 3D7
Pathway
pfa03020  RNA polymerase
pfa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PF3D7_1027400
  09124 Replication and repair
   03420 Nucleotide excision repair
    PF3D7_1027400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfa03021]
    PF3D7_1027400
   03019 Messenger RNA biogenesis [BR:pfa03019]
    PF3D7_1027400
   03400 DNA repair and recombination proteins [BR:pfa03400]
    PF3D7_1027400
Transcription machinery [BR:pfa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PF3D7_1027400
Messenger RNA biogenesis [BR:pfa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PF3D7_1027400
DNA repair and recombination proteins [BR:pfa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PF3D7_1027400
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 810426
NCBI-ProteinID: XP_001347553
PlasmoDB: PF3D7_1027400
UniProt: Q8IJC9
Position
10:complement(join(1145823..1146107,1146547..1146795))
AA seq 177 aa
MYFVIEEWKNVIIKPSQLGPRYQQYIEDMLRNSVEGQCSVKYGYVICVIRIIHSEPGRVQ
DGTGMIVVKVKYQAIVFKPFKDEVLDAIVTDVNKLGFFAQAGPLKIFISRTAIPKYFEYS
EDLHYPCFSSGDYNIKPQTTVRIKLQGIRYDLSNMFAIATINNEYLGCIESNILQVM
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtattttgttattgaagaatggaaaaatgtaatcattaaaccaagccaactaggcccc
agatatcaacaatatattgaagatatgttaaggaatagtgtagaagggcaatgtagtgta
aaatatggatatgttatttgtgttattagaataattcatagtgaacctgggcgagttcag
gatggaactggtatgattgtagttaaggttaaatatcaagccattgtttttaagcctttc
aaagatgaggtattggatgccattgtaacggacgtgaacaagttaggtttttttgctcaa
gcaggtccattaaaaatatttatatcaagaacggctattccaaaatatttcgagtattct
gaggatttacattacccctgtttttcatcaggagattataacataaaacctcagacaaca
gttcgcataaaattacagggtatacgatatgatttatcaaatatgtttgccatagcaaca
attaataatgaatatcttggatgtatagaatctaacattttgcaagttatgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PLASMODB (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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