KEGG   Phascolarctobacterium faecium: PFJ30894_02358
Entry
PFJ30894_02358    CDS       T05784                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pfac  Phascolarctobacterium faecium
Pathway
pfac00300  Lysine biosynthesis
pfac00470  D-Amino acid metabolism
pfac01100  Metabolic pathways
pfac01110  Biosynthesis of secondary metabolites
pfac01120  Microbial metabolism in diverse environments
pfac01230  Biosynthesis of amino acids
Module
pfac_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pfac00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PFJ30894_02358 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PFJ30894_02358 (dapF)
Enzymes [BR:pfac01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PFJ30894_02358 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: BBG64684
Position
complement(2429656..2430528)
AA seq 290 aa
MKMEFTKMHGTGNDYVYVNCMEQELPNPGAISEYISHRRFGIGSDGLIMICKSDVADFKM
RIFNADASEAKMCGNGSRCIAKYVYDKGLTDKTTFTLETLSGIKTIDVFLGEDGKVAEAS
IDMGEPIFKCADIPMISDHFMFVDQGLVLEEDVVYNGTAISVGNPHFVTFVDDVDALDLE
KLGPKFEKHKLFPENVNTEFVQVIDKNTVKFRVWERGSGETWACGTGATAVCVATIMLGH
AGKKGEELTVIAKGGTLKLTHLANNHVILRGPAVTVFEGVIDIPDEVINK
NT seq 873 nt   +upstreamnt  +downstreamnt
atgaaaatggaatttacaaagatgcacggtactggtaacgattatgtttacgtcaactgt
atggaacaggaattgcctaatccgggcgctatttccgaatatatcagccacagacgtttt
ggtattggcagtgatggcctgatcatgatctgtaaatctgacgttgcggattttaaaatg
cgtatttttaacgctgatgcttctgaagccaagatgtgcggtaatgggagcagatgtatc
gccaagtatgtttatgataaaggtctgacggataaaacaacttttacgctggaaacgctc
tccggtatcaaaaccatcgatgtatttttgggtgaagacggtaaagtggcagaagccagt
atcgatatgggcgagcctatttttaaatgtgccgacatccccatgatcagcgatcacttt
atgtttgtagatcagggactggtgctggaagaagacgttgtttataatggtacggctatt
tctgtaggcaatccgcatttcgtcacctttgtagacgatgtagatgctttggatctggaa
aaattagggcctaaatttgaaaaacacaaattatttcctgaaaacgtcaatactgaattt
gtgcaggtaatcgataaaaataccgttaaattccgcgtctgggaacgcggcagcggcgaa
acctgggcctgcggcaccggcgcgacagcagtttgtgttgctactatcatgttgggccat
gcaggtaaaaaaggtgaagaattaacagttatcgccaaaggcggcactctgaagcttacc
catttggccaataaccatgttattttaagaggcccggctgtaactgtatttgaaggcgtc
atcgatattcccgatgaagtcattaataaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system