#=GF ID   Allexi_40kDa
#=GF AC   PF05549.13
#=GF DE   Allexivirus 40kDa protein
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_7591 (release 8.0)
#=GF GA   26.00 26.00;
#=GF TC   26.10 158.10;
#=GF NC   25.40 25.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 57096847 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   8376963
#=GF RT   Novel rod-shaped viruses isolated from garlic, Allium sativum,
#=GF RT   possessing a unique genome organization. 
#=GF RA   Sumi S, Tsuneyoshi T, Furutani H; 
#=GF RL   J Gen Virol 1993;74:1879-1885.
#=GF DR   INTERPRO; IPR008398;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF SQ   10
#=GS A0A1X9PY61_9VIRU/84-344  AC A0A1X9PY61.1
#=GS A0A0A0YR04_9VIRU/93-357  AC A0A0A0YR04.1
#=GS O55605_9VIRU/94-364      AC O55605.1
#=GS O55604_9VIRU/101-367     AC O55604.1
#=GS A0A220NQ57_9VIRU/91-358  AC A0A220NQ57.1
#=GS O09501_9VIRU/24-288      AC O09501.1
#=GS F8VAG2_9VIRU/96-356      AC F8VAG2.1
#=GS ORF4_SHVX/109-380        AC Q04583.1
#=GS Q8QXW2_9VIRU/94-364      AC Q8QXW2.1
#=GS A0A3G1GJ47_9VIRU/94-362  AC A0A3G1GJ47.1
A0A1X9PY61_9VIRU/84-344             .......QRVFFSELQSALNATNALLANRPEVDYQIQQSPLPIEELFGQLHALHANSIKWYKHLEGLQNQATLQIQRL----.......HAALPATADTNSSQINQALHSILANSERIINLLNQD--.R---RVLDDINPQLTSIR..EQIDRSSPLDVLQQIL...AIVSRANPTEPPLEPVT-.LPNFEVEHPSLECRTHGLLVFDNIHAMIPMDITTRPPSTSLQLSINVTENRETTTVQFTIYDAGALIKSGHVSTPHRLSELPGDALFLIHQKCPNFTYKLTHSNVC....
A0A0A0YR04_9VIRU/93-357             .......DRTFFTNLNAALTATGNLLTHVPPARYNLPTTSLPLDELYGLLHALHKNSLEWLTHISHDADQIISKLNAV----.......ENGILNEIRNDSRRLDLILQRISEVESKINDQATPALD.HHLSETLTSIGTRLQELH..VKL---IATPTNNQAR...PSSSTTKPDGADTHLNHStLPTFEAKHPTARCRSYGYVEFDGLSLHIPMDVRGRRSSTALRLITKHTLSSDSTTVKYELLDDGALLLAEEIKTPHKLNQPLSDSLALLHSKCPNFIYKIRDDGLC....
O55605_9VIRU/94-364                 .......QRTFFSNANIALDATRTLLGYVPPARYDVPPVTLPLDELFGQLHALHQNSLEWLTHINHNVDSILDMLNPSNLLS.......QGTPLNRLREMLVALTGKVDDIYATIQSSRLETNQPSS.SKPVNRFETIEHSLESLH..IKLDELTSAVAHALDH...PHVTPVPDEMRPSASTRD.LPAYQAQHPTRPCRAYGTVLFEDKILRIPMDITGRPVSTALKLELHLTTNDQTTMVSYRIYDDGYLLLSDDVETAHKLQHRLSDCLALLHQRCPNFIYKIKGHGLC....
O55604_9VIRU/101-367                .......NRVLFSNAALALEATRNLLSHVPPTRYNLPQTTLPLDELYGQLHALHQNSLEWLTHIGSDTDRLIVDFGTFSSTAvan.hdrMTTHLANIRDELHTLRDLPQLLNRLLKQQELHLQTLTD.TQ--KEITALKT---LIH..HNL---TQSQTQESST...PSSSQSGATTHQPQPSD-.LHPYQARHPTTRCRTYGTLIYNGSSLHMPMDILGKPASTALQLQVALNLRGRDQR-DLQISDNGALLLSDEIFTPHKLNKPLSDALSLLHDNCSNFIYNNKGGRLC....
A0A220NQ57_9VIRU/91-358             vaptsni-------------AERTFTRFIPPTQVPMPELQLDINTLAGSVQSAHMNLLEWIMHNARAIDQLQNTIQNLSIGTrnvvitaQNQINQKLDNDKSTLIEKVDSLQHLLHELKQEANQQFN.GQ---ALEDIQSKLEAIR..LFITS--EIPTNHGQL..iNLLHELQGNQASTPAQNN.LALYEAQHPTINPRTHGRLELDESYIRIPMDVLQRPPSTTLNLKIEVHPKQTKTEVRYTLHDEFELVFIKSLSTPYRMEELPDDALSLLHCHCPRFIYKLTQNNLC....
O09501_9VIRU/24-288                 .......NRTFFTNLSTALDTTSNLINHVPPTRYTLPSVALPLDELYGLLHALHRNSLEWLTHISHDTEQVINKLNNI----.......ETILLSEVRTNSRKIDTVFEKLANIESHLINSEKSDFE.RELAKSLASIETQIQDVH..ARFREMSHHESSTLGG..nPGTSPTPESS----VINSlLPTFNPEHPTARCRAYGSVEFGGTVLQIPMDVRGRRASTALRLSVMYTPKREATTVKYKLFDDGALLFTEELSTQHRFTQPFGDSLALLHSKCPNFLYKIRDEVLC....
F8VAG2_9VIRU/96-356                 ....atr---FFSDSNAVLSETQRITRILPSNTFPMQPSTLPTDELFGQLHALHQNLLQWSIDIDNRVQQLASSVNAKL--D.......AVTFNSANQVSTATLNRLLEELHANMATSQRTG--EAA.QTMLEHLADIQRRLPSTApsDALQQLIQLLSTN--R...P----VEETTPTATPHSE.LPALNPVHNALRCRTYGSIEFNGQTFKRPIDFVGRPPSTTLHLRLDVRRAADHTAVHFTLHDLDRVLLEQVIQTPHQLQHLPDDALFLINLHCPRFTYRR------eagc
ORF4_SHVX/109-380                   .......QRTFFSNLDTALNATQALLNHVPPARYTLPPAPLPVNESFGQLHALHLNTLEWLTHINHNLDSMLNMLNPANLMS.......QGTPLSRLKDAVRTLTQNMNTIQSDQQKILASTSATNH.SDILRKLESLDTGLKQLG..IRLDVVVSSLNNMSER...PPTPSHDTASSSTSTDPNpLPPYQAVHPSLFCRTYGNILYNGIDSRIPMDVTGRPASTSLKLTITVECSEQNTRVNFTLLDDGYILLSDSIETKHKLQHIPSDCLSLIHARCPKFVYKFRGEGLC....
Q8QXW2_9VIRU/94-364                 .......QRTFFSNAGVAIDATRALLGYLPPTRYDVPPATLPLDELYGQLHALHQNSLEWLTHINHNVESIIDFFNPNSLFS.......QGTPLSRLRDAITTLTRTVDDIHSVLTYTELSPEHASS.SKAQTKFEVIERSLEALH..QKVDKLALLAESNPAP...PQVSPNSAKTPPLGAPED.LPVYQAVHPTTSCRTYGTIIFDGTSSRIPMDILGRPASTALRLDMTVATSSQNTTVSYKMFDDGYLLLSENVETAHKLQHCPNDCLALLHQRCQNFIYKIRSHGLC....
A0A3G1GJ47_9VIRU/94-362             .......ERVFFSNLNNAVDAATTLLSNVPGGTYDVQYNPLPIEELYGFINALHANTITWMKHLESLTNAAIGRIDTR----.......--LSYNRHREDHQLMTTKVDDINESLRQMVTEVSRLAGaSANEATMQSLISQLQELS..NSIGQTAPNATLQELVrlvQQLQPTNSNSSLMEAHRR.LPSYEPQHPSLPCRTHGILKFDDVVTRLPMDVQGRAVSTTLELRSTIGKRPDATEIKFALYDAGVLLVSRHVTTNSRLTSLPGDLLSVVHEHCPRFVYRLTHSGLC....
#=GC seq_cons                       .......pRsFFSNhssALsATpsLLsaVPPsRYslPsssLPlDELaGQLHALHpNSLEWLTHIs+ss-pllsplNsh...s.......psshLuclRssppsLsptl-cIpsshpphpppsspsss.sp..cpLpsIpopLpsl+..tplsphsptsospttt...Ptsosssssossspssss.LPsYpApHPThpCRTYGslhF-Gpsh+IPMDlpGRPsSTuL+LplslspsscsTpVcapLaD-GtLLLS-clpTsH+LpchPuDuLuLLHp+CPNFlYKl+spsLC....
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