GenomeNet

Database: Pfam
Entry: Asp4
LinkDB: Asp4
Original site: Asp4 
#=GF ID   Asp4
#=GF AC   PF16996.6
#=GF DE   Accessory secretory protein Sec Asp4
#=GF AU   Coggill P;0000-0001-5731-1588
#=GF SE   Pfam-B_7603 (release 27.0)
#=GF GA   27.70 27.70;
#=GF TC   27.70 51.90;
#=GF NC   26.30 27.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   23000954
#=GF RT   Emerging themes in SecA2-mediated protein export.
#=GF RA   Feltcher ME, Braunstein M;
#=GF RL   Nat Rev Microbiol. 2012;10:779-789.
#=GF DR   INTERPRO; IPR031551;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Asp4 and Asp5 are putative accessory components of the SecY2
#=GF CC   channel of the SecA2-SecY2 mediated export system, but they are
#=GF CC   not present in all SecA2-SecY2 systems. This family of Asp4 is
#=GF CC   found in Firmicutes [1].
#=GF SQ   7
#=GS A8AWV6_STRGC/3-57      AC A8AWV6.1
#=GS U5P5G4_9STRE/5-59      AC U5P5G4.1
#=GS A0A139NMD7_9STRE/5-59  AC A0A139NMD7.1
#=GS A0A139NPI6_9STRE/5-59  AC A0A139NPI6.1
#=GS J0UVX5_STREE/3-41      AC J0UVX5.1
#=GS A0A139NTT2_9STRE/3-57  AC A0A139NTT2.1
#=GS A3CM62_STRSV/3-57      AC A3CM62.1
A8AWV6_STRGC/3-57                 .KKDLFYKDIEGRLDELKHGRPKKEKASLGEKFNKAFVIALGLMILIGLIFTLIGV..
U5P5G4_9STRE/5-59                 .KKDLFYKEVEGRMNALKRRSAEKEKATRSEKVNLTLNVVIGLVILLGVLLTLFRV..
A0A139NMD7_9STRE/5-59             .KDDIFYKDIEGRMDELKRKPPKKEKKTRAERISTFFSVSLGLVILIGLLFTLFRI..
A0A139NPI6_9STRE/5-59             .NEDLFYKEVEGRMADLQQKAPEKEKKTGAERLNTLFSLALGLVILLGLLFTLLRM..
J0UVX5_STREE/3-41                 e-EDLFYKDVEGRMEELKQKPIKKEKKPEGKRLVRLFH------------------fy
A0A139NTT2_9STRE/3-57             .KKDLFYKDVEQKLDSLKQGQPKKEKASLGEKLNKAFVIALGLVILIGLIFTLIG-a.
A3CM62_STRSV/3-57                 .KKDLFYKDIEGRLDELKHGKPKKEKASLGENLNKAFVIVLGLMILIGLIFTLIG-a.
#=GC seq_cons                     .KcDLFYKDlEGRh--LKpttPKKEKtohuE+lNphFslsLGLhILlGLlFTLht...
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