GenomeNet

Database: Pfam
Entry: AvrM_N
LinkDB: AvrM_N
Original site: AvrM_N 
#=GF ID   AvrM_N
#=GF AC   PF18247.2
#=GF DE   Flax-rust effector AvrM N-terminal domain
#=GF AU   Smart A;0000-0002-6965-5633
#=GF SE   ECOD:EUF03970
#=GF GA   25.00 25.00;
#=GF TC   28.00 57.10;
#=GF NC   23.00 24.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   24101475
#=GF RT   Structures of the flax-rust effector AvrM reveal insights into
#=GF RT   the molecular basis of plant-cell entry and effector-triggered
#=GF RT   immunity.
#=GF RA   Ve T, Williams SJ, Catanzariti AM, Rafiqi M, Rahman M, Ellis JG,
#=GF RA   Hardham AR, Jones DA, Anderson PA, Dodds PN, Kobe B;
#=GF RL   Proc Natl Acad Sci U S A. 2013;110:17594-17599.
#=GF DR   INTERPRO; IPR041353;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This is the N-terminal domain found in AvrM present in
#=GF CC   Melampsora lini. AvrM is a secreted effector protein that can
#=GF CC   internalize into plant cells in the absence of pathogens, binds
#=GF CC   to phosphoinositides and results in effector-triggered immunity.
#=GF CC   This domain is related to the WY domain core in oomycete
#=GF CC   effectors [1].
#=GF SQ   6
#=GS F4RW29_MELLP/135-192  AC F4RW29.1
#=GS F4R586_MELLP/207-271  AC F4R586.1
#=GS F4RW28_MELLP/131-193  AC F4RW28.1
#=GS F4S8Q3_MELLP/220-284  AC F4S8Q3.1
#=GS F4S6E1_MELLP/159-223  AC F4S6E1.1
#=GS F4RGY5_MELLP/230-294  AC F4RGY5.1
F4RW29_MELLP/135-192             qhvvtp-------------QKLEFLNPAQVRELSHDDLIKYVAERDAVAANEAKNLYQRAQEYTQAEQNAF
F4R586_MELLP/207-271             ......DEAFKNQNGMVLKGQMEDIKPVEVAKLSPDRLIRYAADRNDNVEGMARNLYKASEKYIKDEQRAF
F4RW28_MELLP/131-193             ......DPIFKSH--KLFDWNVKFLKPSQLKYLSTDETIRYVAERDTILSKEVMKLYKIGKEYERAEENAF
F4S8Q3_MELLP/220-284             ......PPIFAKGLGKAFRIDFKYLKPAEVQKLPPYELLRYISERDVNVRKNTRKLDDLARNYYSAQKDAF
F4S6E1_MELLP/159-223             ......EPVFERAHIKPYGETMEFLNRDHVEKLSNDALIRYMAEKDTQIQKMAIDFQEAAQAHKEAEAKAF
F4RGY5_MELLP/230-294             ......DEAFKNQNIMLFRGQMEDIKPVEVAKLSPDRLIRYAADRNEDVEGMARNLYKASEKYTQAEQKAF
#=GC seq_cons                    ......-.hFcpt.hhhactphEaLKPscVpKLSsDcLIRYsAERDsslpp.A+sLYctuccYppAEpcAF
//
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