#=GF ID BaffR-Tall_bind
#=GF AC PF09256.10
#=GF DE BAFF-R, TALL-1 binding
#=GF AU Sammut SJ;0000-0003-4472-904X
#=GF SE pdb_1oqe
#=GF GA 21.00 21.00;
#=GF TC 21.10 21.20;
#=GF NC 20.80 19.60;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 45638612 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Domain
#=GF RN [1]
#=GF RM 12721620
#=GF RT Ligand-receptor binding revealed by the TNF family member
#=GF RT TALL-1.
#=GF RA Liu Y, Hong X, Kappler J, Jiang L, Zhang R, Xu L, Pan CH, Martin
#=GF RA WE, Murphy RC, Shu HB, Dai S, Zhang G;
#=GF RL Nature. 2003;423:49-56.
#=GF DR INTERPRO; IPR015336;
#=GF DR SCOP; 1oqe; fa;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC Members of this family, which are predominantly found in the
#=GF CC tumour necrosis factor receptor superfamily member 13c, BAFF-R,
#=GF CC are required for binding to tumour necrosis factor ligand TALL-1
#=GF CC [1].
#=GF SQ 71
#=GS H0W812_CAVPO/16-45 AC H0W812.2
#=GS A0A093H8L8_STRCA/13-42 AC A0A093H8L8.1
#=GS A0A091LDF4_CATAU/16-41 AC A0A091LDF4.1
#=GS K7G7Y0_PELSI/14-35 AC K7G7Y0.1
#=GS G1T4W9_RABIT/19-47 AC G1T4W9.1
#=GS A0A091KDM8_COLST/15-39 AC A0A091KDM8.1
#=GS A0A091PJ25_APAVI/16-44 AC A0A091PJ25.1
#=GS H0XRB7_OTOGA/19-48 AC H0XRB7.1
#=GS A0A091R3S8_9GRUI/16-43 AC A0A091R3S8.1
#=GS L5K9E1_PTEAL/16-45 AC L5K9E1.1
#=GS M3WQA3_FELCA/19-48 AC M3WQA3.2
#=GS A0A091NSZ2_9PASS/16-44 AC A0A091NSZ2.1
#=GS A0A091LK81_9GRUI/15-42 AC A0A091LK81.1
#=GS A0A091HDJ8_BUCRH/16-44 AC A0A091HDJ8.1
#=GS W5QBP3_SHEEP/22-47 AC W5QBP3.1
#=GS M3YY53_MUSPF/19-48 AC M3YY53.1
#=GS A0A151NHU1_ALLMI/14-42 AC A0A151NHU1.1
#=GS D4A281_RAT/19-48 AC D4A281.2
#=GS A0A087VKH9_BALRE/2-21 AC A0A087VKH9.1
#=GS A0A286Y666_CAVPO/16-45 AC A0A286Y666.1
#=GS A0A1V4JB67_PATFA/20-50 AC A0A1V4JB67.1
#=GS A0A091S759_NESNO/15-43 AC A0A091S759.1
#=GS A0A1U8BTI9_MESAU/19-48 AC A0A1U8BTI9.1
#=GS F1NLV1_CHICK/17-46 AC F1NLV1.1
#=GS A0A091IRU1_EGRGA/16-43 AC A0A091IRU1.1
#=GS A0A091XCI0_OPIHO/15-44 AC A0A091XCI0.1
#=GS A0A2I0MJJ4_COLLI/20-51 AC A0A2I0MJJ4.1
#=GS A0A093ER89_9AVES/16-41 AC A0A093ER89.1
#=GS U3I1L0_ANAPL/17-38 AC U3I1L0.1
#=GS A0A091PKA5_LEPDC/16-45 AC A0A091PKA5.1
#=GS G5BPQ7_HETGA/22-51 AC G5BPQ7.1
#=GS F6YQZ6_ORNAN/19-48 AC F6YQZ6.1
#=GS G3IBR9_CRIGR/2-31 AC G3IBR9.1
#=GS H2QLT1_PANTR/16-45 AC H2QLT1.2
#=GS S9XLJ2_CAMFR/21-50 AC S9XLJ2.1
#=GS Q3U106_MOUSE/19-48 AC Q3U106.1
#=GS G1LRZ9_AILME/18-47 AC G1LRZ9.1
#=GS G1S0G7_NOMLE/16-45 AC G1S0G7.2
#=GS G3WFH9_SARHA/12-37 AC G3WFH9.1
#=GS A0A226NWQ2_COLVI/17-48 AC A0A226NWQ2.1
#=GS A0A226MP14_CALSU/17-46 AC A0A226MP14.1
#=GS A0A1W0XBI3_HYPDU/54-76 AC A0A1W0XBI3.1
#=GS A0A1S2ZRM0_ERIEU/14-43 AC A0A1S2ZRM0.1
#=GS A0A091FVM1_9AVES/13-37 AC A0A091FVM1.1
#=GS G3WFH9_SARHA/34-61 AC G3WFH9.1
#=GS H9KVT2_CALJA/16-45 AC H9KVT2.1
#=GS G3U9C5_LOXAF/16-45 AC G3U9C5.1
#=GS G3R8S3_GORGO/16-45 AC G3R8S3.2
#=GS TR13C_HUMAN/16-45 AC Q96RJ3.1
#=GS TR13C_HUMAN/16-45 DR PDB; 3V56 L; 23-34;
#=GS TR13C_HUMAN/16-45 DR PDB; 2HFG R; 16-39;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OSX A; 17-42;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE N; 1-24;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE O; 1-30;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE L; 1-30;
#=GS TR13C_HUMAN/16-45 DR PDB; 1MPV A; 23-34;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE K; 1-30;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE R; 1-30;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE P; 1-30;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE M; 1-30;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE Q; 1-30;
#=GS A0A091U059_PHALP/16-44 AC A0A091U059.1
#=GS A0A096NKC9_PAPAN/16-45 AC A0A096NKC9.2
#=GS A0A1U7RXT6_ALLSI/14-42 AC A0A1U7RXT6.1
#=GS F6VS44_HORSE/19-47 AC F6VS44.1
#=GS A0A099ZNP1_TINGU/13-45 AC A0A099ZNP1.1
#=GS G1NHN5_MELGA/17-48 AC G1NHN5.1
#=GS H2P4K9_PONAB/1-29 AC H2P4K9.1
#=GS A0A0A0A421_CHAVO/15-42 AC A0A0A0A421.1
#=GS A0A1A6GSF7_NEOLE/19-48 AC A0A1A6GSF7.1
#=GS A0A087QLV5_APTFO/17-44 AC A0A087QLV5.1
#=GS A0A091W0J0_NIPNI/16-44 AC A0A091W0J0.1
#=GS TR13C_MOUSE/19-48 AC Q9D8D0.1
#=GS F1MJD0_BOVIN/16-45 AC F1MJD0.2
#=GS F1PL17_CANLF/17-46 AC F1PL17.2
#=GS A0A093IQ86_DRYPU/14-43 AC A0A093IQ86.1
#=GS A0A093ELK8_TAUER/14-41 AC A0A093ELK8.1
#=GS A0A1U7TUV1_TARSY/16-45 AC A0A1U7TUV1.1
#=GS A0A287AJ47_PIG/16-45 AC A0A287AJ47.1
#=GS A0A093N7X7_PYGAD/17-44 AC A0A093N7X7.1
#=GS A0A093J756_EURHL/15-43 AC A0A093J756.1
#=GS A0A0Q3PDH1_AMAAE/22-52 AC A0A0Q3PDH1.1
#=GS A0A091HID2_CALAN/14-44 AC A0A091HID2.1
H0W812_CAVPO/16-45 ......PTRCVQTECFDHLVRHCVSCR.LL..RTPDSQ-a...........
A0A093H8L8_STRCA/13-42 .....s-TSCLPSQCFDPLIRSCVECS.KL..-------ykdntkp.....
A0A091LDF4_CATAU/16-41 ......-SSCLSSECFDLLTRSCVKCS.--..-------dlfkdn......
K7G7Y0_PELSI/14-35 .....a--TCSQSLCFDILTKACVSCS.--..-------el..........
G1T4W9_RABIT/19-47 ......PTSCVQAQCFDPLTRHCVACY.LL..HIPP---aa..........
A0A091KDM8_COLST/15-39 ......-SSCLSPHCFDLLTRSCVKCS.--..-------dlfkd.......
A0A091PJ25_APAVI/16-44 ......-SSCLSSQCFDLLTKSCVKCD.LF..N------dnttlp......
H0XRB7_OTOGA/19-48 ......PTSCYPAQCFDPLLRLCVDCE.LF..RTPES--pa..........
A0A091R3S8_9GRUI/16-43 ......-SSCLSSQCFDLLTKSCVKCS.--..-------dlfkdnat....
L5K9E1_PTEAL/16-45 ......PTQCVQAQCFDPLVRNCVACK.LF..RTPEPGP............
M3WQA3_FELCA/19-48 ......PTKCVVDKCFDPLVRKCVDCR.LL..RTPEPGP............
A0A091NSZ2_9PASS/16-44 .....p--SCLSTECFDTLTRSCIKCS.--..-------dlfkdnttl...
A0A091LK81_9GRUI/15-42 ......-SPCLSSQCFDPLTRSCVKCS.--..-------dlfkdnat....
A0A091HDJ8_BUCRH/16-44 ......-SSCLSSQCFDLLTRSCVKCS.--..-------dlfkdnttl...
W5QBP3_SHEEP/22-47 ....rr------PRCSAPLVRICVACS.LL..RTTEP--rl..........
M3YY53_MUSPF/19-48 ......PTQCVQAQCFDPLVRNCVACN.LF..RTPEPRP............
A0A151NHU1_ALLMI/14-42 .....s--DCPQDLCFDKLTKQCLSCH.LF..GISNT--dt..........
D4A281_RAT/19-48 .....s-TQCNQTECFDPLVRNCVSCE.LF..YTPETRH............
A0A087VKH9_BALRE/2-21 ......PSPCLSSQCFDLLTKSCV---.--..-------kg..........
A0A286Y666_CAVPO/16-45 ......PTRCVQTECFDHLVRHCVSCR.LL..RTPEPR-a...........
A0A1V4JB67_PATFA/20-50 .....s--SCLSSQCFDTLTKLCVECSdLL..K------dhttepa.....
A0A091S759_NESNO/15-43 ......-SSCLSSQCFDLLTRSCVKCS.--..-------dlfkentkp...
A0A1U8BTI9_MESAU/19-48 ......PTPCVQTLCFDPLVRHCVACN.LL..RTPDPLH............
F1NLV1_CHICK/17-46 .....a--SCLSSQCFDPLTRSCVMCS.--..-------elfgdnttdp..
A0A091IRU1_EGRGA/16-43 ......-SSCLSSQCFDLLTRSCVKCS.--..-------dlfkdntt....
A0A091XCI0_OPIHO/15-44 .....s--SCLSSQCFDLLTRSCVKCSdLF..K------enttlp......
A0A2I0MJJ4_COLLI/20-51 .....s--SCLSSQCFDTLTKLCVECSdLLkdHTTEP--tr..........
A0A093ER89_9AVES/16-41 ......-SSCLSSQCFDPLTKSCVKCS.--..-------dlfkdn......
U3I1L0_ANAPL/17-38 .....a--ACLPSQCFDPLTRFCVRCS.--..-------dl..........
A0A091PKA5_LEPDC/16-45 .....s--SCLSSQCFDILTRSCVKCSdLF..RD-----nttlp.......
G5BPQ7_HETGA/22-51 ......PTRCIQAECFDHLVRHCVACS.LL..RTAEPR-a...........
F6YQZ6_ORNAN/19-48 ......PSACGQPNCYDPLTRGCVSCF.LL..QFPGT--ve..........
G3IBR9_CRIGR/2-31 .....t-TPCVQTLCFDPLVRHCVACN.LL..RTPDPLH............
H2QLT1_PANTR/16-45 ......PTPCVPAECFDLLVRHCVACG.LL..RTPRPKP............
S9XLJ2_CAMFR/21-50 ......PTQCLQTQCFDVLVRNCVACS.LL..RTPEPRP............
Q3U106_MOUSE/19-48 ......PTQCNQTECFDPLVRNCVSCE.LF..HTPDTGH............
G1LRZ9_AILME/18-47 ......PTQCVQAECFDPLVRNCVACK.LF..RTSEPRP............
G1S0G7_NOMLE/16-45 ......PTPCVPAECFDLLVRHCVACG.LL..RTPRPKP............
G3WFH9_SARHA/12-37 ..kcpf-------LCFDELIRKCLPCS.LH..QTP----vkc.........
A0A226NWQ2_COLVI/17-48 .....a--SCLSSQCFDPLTRSCVMCSeLF..-------gdnttepsp...
A0A226MP14_CALSU/17-46 .....a--SCLSSQCFDPLTRSCVMCS.--..-------elfgdnatep..
A0A1W0XBI3_HYPDU/54-76 dcgtla-----VEQCFDPLTNGCVACH.--..-------a...........
A0A1S2ZRM0_ERIEU/14-43 ......PSPCLEALCFDLLVRDCVACS.FL..HTSEPRP............
A0A091FVM1_9AVES/13-37 ......-SSCLFPECFDTLTRSCIDCS.--..-------elfkd.......
G3WFH9_SARHA/34-61 ...pvk---C-PSLCFDELVRDCLPCD.LY..QTPK---at..........
H9KVT2_CALJA/16-45 ......PTPCVPTECYDLLVRKCVDCR.LL..RRSPPK-t...........
G3U9C5_LOXAF/16-45 ......PTLCGQAECFDLLLRVCVACR.LF..RTPEPSP............
G3R8S3_GORGO/16-45 ......PTPCVPAECFDLLVRHCVACG.LL..RTPRPKP............
TR13C_HUMAN/16-45 ......PTPCVPAECFDLLVRHCVACG.LL..RTPRPKP............
#=GR TR13C_HUMAN/16-45 SS ......----BTTEEEETTTTEEEEGG.GS..SS--S--............
A0A091U059_PHALP/16-44 ......-SSCLSSQCFDLLIRSCVKCS.--..-------dlfkdnttl...
A0A096NKC9_PAPAN/16-45 ......PTPCVPAECFDLLVRHCVACG.LL..RTPRPKP............
A0A1U7RXT6_ALLSI/14-42 .....s--DCPQDLCFDKLTKQCLSCH.LF..GISNT--dt..........
F6VS44_HORSE/19-47 ......PTQCAPAQCFDPLVRKCVA-H.LL..RTPEPG-s...........
A0A099ZNP1_TINGU/13-45 .....s-TSCLPSQCFDSLTKSCVKCY.--..-------elykdnttepah
G1NHN5_MELGA/17-48 .....a--SCLSSQCFDPLTRSCVMCS.--..-------elfgdnttepap
H2P4K9_PONAB/1-29 ......-TPCIPAECFDLLVRHCVACG.LL..RTPRPKP............
A0A0A0A421_CHAVO/15-42 ......-SSCLSSQCFDPLTRSCVQCS.--..-------dlfkenat....
A0A1A6GSF7_NEOLE/19-48 ......PTPCDQTLCFDPLVRHCVACK.LL..RTPDS--pq..........
A0A087QLV5_APTFO/17-44 .....s---CLSSQCFDLLTRSCVKCS.--..-------dlfkdnttl...
A0A091W0J0_NIPNI/16-44 .....p--SCLSPQCFDLLTKSCVKCS.--..-------dlfkdnttl...
TR13C_MOUSE/19-48 ......PTQCNQTECFDPLVRNCVSCE.LF..HTPDTGH............
F1MJD0_BOVIN/16-45 ......PTQCLQTQCFDPLVRNCVACS.LL..RTTGP--rl..........
F1PL17_CANLF/17-46 ......PTRCVQAECFDPLVRNCVACK.LL..WTPEPRP............
A0A093IQ86_DRYPU/14-43 ......PSSCLSSQCFDLLTKSCVECSeLF..-------kdnttv......
A0A093ELK8_TAUER/14-41 .....s---CLSSQCFDLLTRSCVKCS.--..-------dlfkdnttl...
A0A1U7TUV1_TARSY/16-45 ......PTPCVQAECFDLLVRHCVACE.FL..HTPQ---lrp.........
A0A287AJ47_PIG/16-45 ......PTQCLQTQCFDLLVRNCVACS.LL..RTPDPGP............
A0A093N7X7_PYGAD/17-44 .....s---CLSSQCFDLLTRSCVKCS.--..-------dlfkdnttl...
A0A093J756_EURHL/15-43 ......-SSCLSSQCFDLLTRSCVKCS.--..-------dlfkdnttl...
A0A0Q3PDH1_AMAAE/22-52 .....s--SCLSSQCFDLLTKSCVKCSdLF..K------enttepa.....
A0A091HID2_CALAN/14-44 ......PSSCLYPQCFDPLTRSCVKCSdLF..K------nnttlp......
#=GC SS_cons ......----BTTEEEETTTTEEEEGG.GS..SS--S--............
#=GC seq_cons .......osClsopCFD.LsRsCVtCu.Lh.........t...........
//
