#=GF ID BaffR-Tall_bind
#=GF AC PF09256.11
#=GF DE BAFF-R, TALL-1 binding
#=GF AU Sammut SJ;0000-0003-4472-904X
#=GF SE pdb_1oqe
#=GF GA 21.00 21.00;
#=GF TC 21.00 21.30;
#=GF NC 20.90 20.30;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Domain
#=GF RN [1]
#=GF RM 12721620
#=GF RT Ligand-receptor binding revealed by the TNF family member
#=GF RT TALL-1.
#=GF RA Liu Y, Hong X, Kappler J, Jiang L, Zhang R, Xu L, Pan CH, Martin
#=GF RA WE, Murphy RC, Shu HB, Dai S, Zhang G;
#=GF RL Nature. 2003;423:49-56.
#=GF DR INTERPRO; IPR015336;
#=GF DR SCOP; 1oqe; fa;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC Members of this family, which are predominantly found in the
#=GF CC tumour necrosis factor receptor superfamily member 13c, BAFF-R,
#=GF CC are required for binding to tumour necrosis factor ligand TALL-1
#=GF CC [1].
#=GF SQ 81
#=GS A0A2Y9T0B2_PHYMC/22-50 AC A0A2Y9T0B2.1
#=GS H0W812_CAVPO/16-45 AC H0W812.2
#=GS A0A093H8L8_STRCA/13-42 AC A0A093H8L8.1
#=GS K7G7Y0_PELSI/14-35 AC K7G7Y0.1
#=GS G1T4W9_RABIT/19-47 AC G1T4W9.1
#=GS A0A2K5V1K1_MACFA/16-45 AC A0A2K5V1K1.1
#=GS F1MJD0_BOVIN/16-44 AC F1MJD0.3
#=GS H0XRB7_OTOGA/19-48 AC H0XRB7.1
#=GS A0A384D374_URSMA/19-48 AC A0A384D374.1
#=GS A0A452QPN6_URSAM/19-48 AC A0A452QPN6.1
#=GS L5K9E1_PTEAL/16-45 AC L5K9E1.1
#=GS A0A3Q7UGN9_URSAR/19-48 AC A0A3Q7UGN9.1
#=GS A0A2U3Y9P0_LEPWE/19-48 AC A0A2U3Y9P0.1
#=GS A0A340WYL1_LIPVE/16-46 AC A0A340WYL1.1
#=GS W5QBP3_SHEEP/22-47 AC W5QBP3.1
#=GS M3YY53_MUSPF/19-48 AC M3YY53.1
#=GS A0A151NHU1_ALLMI/14-42 AC A0A151NHU1.1
#=GS A0A2Y9QBA0_DELLE/22-50 AC A0A2Y9QBA0.1
#=GS D4A281_RAT/19-48 AC D4A281.2
#=GS A0A3Q7U5J6_VULVU/24-53 AC A0A3Q7U5J6.1
#=GS A0A286Y666_CAVPO/16-45 AC A0A286Y666.1
#=GS A0A452EY37_CAPHI/16-45 AC A0A452EY37.1
#=GS A0A2K6R993_RHIRO/16-45 AC A0A2K6R993.1
#=GS A0A1V4JB67_PATFA/20-50 AC A0A1V4JB67.1
#=GS F1NLV1_CHICK/17-46 AC F1NLV1.1
#=GS A0A091IRU1_EGRGA/16-43 AC A0A091IRU1.1
#=GS A0A091XCI0_OPIHO/15-44 AC A0A091XCI0.1
#=GS A0A087QLV5_APTFO/17-45 AC A0A087QLV5.1
#=GS A0A2Y9Q5E6_DELLE/22-50 AC A0A2Y9Q5E6.1
#=GS A0A2K5CHR2_AOTNA/16-44 AC A0A2K5CHR2.1
#=GS G5BPQ7_HETGA/22-51 AC G5BPQ7.1
#=GS F6YQZ6_ORNAN/19-48 AC F6YQZ6.1
#=GS G3IBR9_CRIGR/2-31 AC G3IBR9.1
#=GS H2QLT1_PANTR/16-45 AC H2QLT1.2
#=GS A0A452CM34_BALAS/16-45 AC A0A452CM34.1
#=GS A0A3Q7U4X3_URSAR/19-48 AC A0A3Q7U4X3.1
#=GS Q3U106_MOUSE/19-48 AC Q3U106.1
#=GS A0A0Q3PDH1_AMAAE/22-51 AC A0A0Q3PDH1.1
#=GS M3WQA3_FELCA/16-45 AC M3WQA3.3
#=GS A0A2Y9KM89_ENHLU/19-48 AC A0A2Y9KM89.1
#=GS G1LRZ9_AILME/18-47 AC G1LRZ9.1
#=GS G1S0G7_NOMLE/16-45 AC G1S0G7.2
#=GS A0A226NWQ2_COLVI/17-48 AC A0A226NWQ2.1
#=GS A0A093IQ86_DRYPU/14-44 AC A0A093IQ86.1
#=GS F2YU84_HORSE/16-45 AC F2YU84.1
#=GS A0A2Y9KPP4_ENHLU/19-48 AC A0A2Y9KPP4.1
#=GS A0A226MP14_CALSU/17-46 AC A0A226MP14.1
#=GS A0A2R8VI78_MOUSE/16-29 AC A0A2R8VI78.1
#=GS A0A1S2ZRM0_ERIEU/14-43 AC A0A1S2ZRM0.1
#=GS A0A493TDS8_ANAPP/17-46 AC A0A493TDS8.1
#=GS G3WFH9_SARHA/34-61 AC G3WFH9.1
#=GS G3WFH9_SARHA/12-38 AC G3WFH9.1
#=GS H9KVT2_CALJA/16-45 AC H9KVT2.1
#=GS G3U9C5_LOXAF/16-45 AC G3U9C5.1
#=GS A0A2Y9R6Z2_TRIMA/188-217 AC A0A2Y9R6Z2.1
#=GS A0A2Y9L0T0_ENHLU/19-48 AC A0A2Y9L0T0.1
#=GS G3R8S3_GORGO/16-45 AC G3R8S3.2
#=GS A0A2Y9QB52_DELLE/22-50 AC A0A2Y9QB52.1
#=GS TR13C_HUMAN/16-45 AC Q96RJ3.1
#=GS TR13C_HUMAN/16-45 DR PDB; 3V56 L; 23-34;
#=GS TR13C_HUMAN/16-45 DR PDB; 2HFG R; 16-39;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OSX A; 17-42;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE N; 1-24;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE O; 1-30;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE L; 1-30;
#=GS TR13C_HUMAN/16-45 DR PDB; 1MPV A; 23-34;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE K; 1-30;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE R; 1-30;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE P; 1-30;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE M; 1-30;
#=GS TR13C_HUMAN/16-45 DR PDB; 1OQE Q; 1-30;
#=GS A0A096NKC9_PAPAN/16-45 AC A0A096NKC9.2
#=GS A0A1U7RXT6_ALLSI/14-42 AC A0A1U7RXT6.1
#=GS Q3SXS7_MOUSE/19-48 AC Q3SXS7.1
#=GS A0A091W0J0_NIPNI/16-45 AC A0A091W0J0.1
#=GS A0A2U3ZCW5_ODORO/19-48 AC A0A2U3ZCW5.1
#=GS A0A099ZNP1_TINGU/13-45 AC A0A099ZNP1.1
#=GS G1NHN5_MELGA/17-48 AC G1NHN5.1
#=GS H2P4K9_PONAB/1-29 AC H2P4K9.1
#=GS A0A0A0A421_CHAVO/15-42 AC A0A0A0A421.1
#=GS A0A091FVM1_9AVES/13-38 AC A0A091FVM1.1
#=GS A0A2K5SC14_CEBCA/16-45 AC A0A2K5SC14.1
#=GS A0A1A6GSF7_NEOLE/19-48 AC A0A1A6GSF7.1
#=GS A0A3Q2I3M6_HORSE/16-45 AC A0A3Q2I3M6.1
#=GS TR13C_MOUSE/19-48 AC Q9D8D0.1
#=GS F1PL17_CANLF/17-46 AC F1PL17.2
#=GS A0A2I0MJJ4_COLLI/20-50 AC A0A2I0MJJ4.1
#=GS A0A2K6GIX6_PROCO/16-45 AC A0A2K6GIX6.1
#=GS A0A1U7TUV1_TARSY/16-45 AC A0A1U7TUV1.1
#=GS A0A287AJ47_PIG/16-45 AC A0A287AJ47.1
#=GS A0A2Y9KN04_ENHLU/19-48 AC A0A2Y9KN04.1
#=GS A0A091HID2_CALAN/14-44 AC A0A091HID2.1
#=GS A0A3Q0CJZ6_MESAU/46-75 AC A0A3Q0CJZ6.1
A0A2Y9T0B2_PHYMC/22-50 ...p--QCLQTQCFDPLVRKCVACS.LLRT.TEPRP............
H0W812_CAVPO/16-45 ....PTRCVQTECFDHLVRHCVSCR.LLRT.PDSQ-a...........
A0A093H8L8_STRCA/13-42 ...s-TSCLPSQCFDPLIRSCVECS.KL--.-----ykdntkp.....
K7G7Y0_PELSI/14-35 ...a--TCSQSLCFDILTKACVSCS.----.-----el..........
G1T4W9_RABIT/19-47 ....PTSCVQAQCFDPLTRHCVACY.LLHI.PP---aa..........
A0A2K5V1K1_MACFA/16-45 ....PTPCVPAECFDLLVRHCVACG.LLRT.PRPKP............
F1MJD0_BOVIN/16-44 ....PTQCLQTQCFDPLVRNCVACS.LLRT.TGP--r...........
H0XRB7_OTOGA/19-48 ....PTSCYPAQCFDPLLRLCVDCE.LFRT.PES--pa..........
A0A384D374_URSMA/19-48 ....PTQCVQAECFDPLVRNCVACK.LFRT.SEPRP............
A0A452QPN6_URSAM/19-48 ....PTQCVQAECFDPLVRNCVACK.LFRT.SEPRP............
L5K9E1_PTEAL/16-45 ....PTQCVQAQCFDPLVRNCVACK.LFRT.PEPGP............
A0A3Q7UGN9_URSAR/19-48 ....PTQCVQAECFDPLVRNCVACK.LFRT.SEPRP............
A0A2U3Y9P0_LEPWE/19-48 ....PTQCVQAECFDPLVRNCVACK.LFRT.PEPRP............
A0A340WYL1_LIPVE/16-46 ..tp--QCLQTQCFDPLVRKCVACS.LLRTePRP--gk..........
W5QBP3_SHEEP/22-47 ..rr------PRCSAPLVRICVACS.LLRT.TEP--rl..........
M3YY53_MUSPF/19-48 ....PTQCVQAQCFDPLVRNCVACN.LFRT.PEPRP............
A0A151NHU1_ALLMI/14-42 ...s--DCPQDLCFDKLTKQCLSCH.LFGI.SNT--dt..........
A0A2Y9QBA0_DELLE/22-50 ...p--QCLQTQCFDPLVRKCVACS.LLRT.TEPRP............
D4A281_RAT/19-48 ...s-TQCNQTECFDPLVRNCVSCE.LFYT.PETRH............
A0A3Q7U5J6_VULVU/24-53 ....PTRCVQAECFDPLVRNCVACK.LLRT.PEPRP............
A0A286Y666_CAVPO/16-45 ....PTRCVQTECFDHLVRHCVSCR.LLRT.PEPR-a...........
A0A452EY37_CAPHI/16-45 ....PTQCLQTQCFDPLVRNCVACS.LLRT.TEP--rl..........
A0A2K6R993_RHIRO/16-45 ....PTPCVPAECFDLLVRHCVACG.LLRT.PRPKP............
A0A1V4JB67_PATFA/20-50 ....-SSCLSSQCFDTLTKLCVECSdLLK-.-----dhttepa.....
F1NLV1_CHICK/17-46 ...a--SCLSSQCFDPLTRSCVMCS.----.-----elfgdnttdp..
A0A091IRU1_EGRGA/16-43 ....-SSCLSSQCFDLLTRSCVKCS.----.-----dlfkdntt....
A0A091XCI0_OPIHO/15-44 ....-SSCLSSQCFDLLTRSCVKCSdLFK-.-----enttlp......
A0A087QLV5_APTFO/17-45 ...s---CLSSQCFDLLTRSCVKCSdLF--.-----kdnttlp.....
A0A2Y9Q5E6_DELLE/22-50 ...p--QCLQTQCFDPLVRKCVACS.LLRT.TEPRP............
A0A2K5CHR2_AOTNA/16-44 ....PTPCVPTECYDLLVRKCVDCR.LLRK.S----plk.........
G5BPQ7_HETGA/22-51 ....PTRCIQAECFDHLVRHCVACS.LLRT.AEPR-a...........
F6YQZ6_ORNAN/19-48 ....PSACGQPNCYDPLTRGCVSCF.LLQF.PGT--ve..........
G3IBR9_CRIGR/2-31 ...t-TPCVQTLCFDPLVRHCVACN.LLRT.PDPLH............
H2QLT1_PANTR/16-45 ....PTPCVPAECFDLLVRHCVACG.LLRT.PRPKP............
A0A452CM34_BALAS/16-45 ..tp--QCLQTQCFDPLVRKCVACS.LLRT.TEPRP............
A0A3Q7U4X3_URSAR/19-48 ....PTQCVQAECFDPLVRNCVACK.LFRT.SEPRP............
Q3U106_MOUSE/19-48 ....PTQCNQTECFDPLVRNCVSCE.LFHT.PDTGH............
A0A0Q3PDH1_AMAAE/22-51 ....-SSCLSSQCFDLLTKSCVKCSdLFKE.-----nttep.......
M3WQA3_FELCA/16-45 ....PTKCVVDKCFDPLVRKCVDCR.LLRT.PEPGP............
A0A2Y9KM89_ENHLU/19-48 ....PTQCVQAQCFDPLVRNCVACN.LFRT.PEPRP............
G1LRZ9_AILME/18-47 ....PTQCVQAECFDPLVRNCVACK.LFRT.SEPRP............
G1S0G7_NOMLE/16-45 ....PTPCVPAECFDLLVRHCVACG.LLRT.PRPKP............
A0A226NWQ2_COLVI/17-48 ...a--SCLSSQCFDPLTRSCVMCSeLF--.-----gdnttepsp...
A0A093IQ86_DRYPU/14-44 ....PSSCLSSQCFDLLTKSCVECSeLFK-.-----dnttvp......
F2YU84_HORSE/16-45 ....PTQCAPAQCFDPLVRKCVACH.LLRT.PEPG-s...........
A0A2Y9KPP4_ENHLU/19-48 ....PTQCVQAQCFDPLVRNCVACN.LFRT.PEPRP............
A0A226MP14_CALSU/17-46 ...a--SCLSSQCFDPLTRSCVMCS.----.-----elfgdnatep..
A0A2R8VI78_MOUSE/16-29 ....PTQCNQTECFDPL--------.----.-----q...........
A0A1S2ZRM0_ERIEU/14-43 ....PSPCLEALCFDLLVRDCVACS.FLHT.SEPRP............
A0A493TDS8_ANAPP/17-46 ...a--ACLPSQCFDPLTRFCVRCAdLFK-.-----dnatep......
G3WFH9_SARHA/34-61 pvkc-----PSLCFDELVRDCLPCD.LYQT.PK---at..........
G3WFH9_SARHA/12-38 kcpf-------LCFDELIRKCLPCS.LHQT.P----vkcp........
H9KVT2_CALJA/16-45 ....PTPCVPTECYDLLVRKCVDCR.LLRR.SPPK-t...........
G3U9C5_LOXAF/16-45 ....PTLCGQAECFDLLLRVCVACR.LFRT.PEPSP............
A0A2Y9R6Z2_TRIMA/188-217 ....PTLCGQAECFDRLLRLCVACN.LFRT.PEPSP............
A0A2Y9L0T0_ENHLU/19-48 ....PTQCVQAQCFDPLVRNCVACN.LFRT.PEPRP............
G3R8S3_GORGO/16-45 ....PTPCVPAECFDLLVRHCVACG.LLRT.PRPKP............
A0A2Y9QB52_DELLE/22-50 ...p--QCLQTQCFDPLVRKCVACS.LLRT.TEPRP............
TR13C_HUMAN/16-45 ....PTPCVPAECFDLLVRHCVACG.LLRT.PRPKP............
#=GR TR13C_HUMAN/16-45 SS ....----BTTEEEETTTTEEEEGG.GSSS.--S--............
A0A096NKC9_PAPAN/16-45 ....PTPCVPAECFDLLVRHCVACG.LLRT.PRPKP............
A0A1U7RXT6_ALLSI/14-42 ...s--DCPQDLCFDKLTKQCLSCH.LFGI.SNT--dt..........
Q3SXS7_MOUSE/19-48 ....PTQCNQTECFDPLVRNCVSCE.LFHT.PDTGH............
A0A091W0J0_NIPNI/16-45 ...p--SCLSPQCFDLLTKSCVKCSdLF--.-----kdnttlp.....
A0A2U3ZCW5_ODORO/19-48 ....PTQCVQAECFDPLVRNCVACK.LFRT.PEPRP............
A0A099ZNP1_TINGU/13-45 ...s-TSCLPSQCFDSLTKSCVKCY.----.-----elykdnttepah
G1NHN5_MELGA/17-48 ...a--SCLSSQCFDPLTRSCVMCSeLF--.-----gdnttepap...
H2P4K9_PONAB/1-29 ....-TPCIPAECFDLLVRHCVACG.LLRT.PRPKP............
A0A0A0A421_CHAVO/15-42 ....-SSCLSSQCFDPLTRSCVQCSdL---.-----fkenat......
A0A091FVM1_9AVES/13-38 ....-SSCLFPECFDTLTRSCIDCS.----.-----elfkdn......
A0A2K5SC14_CEBCA/16-45 ....PTPCVPTECYDLLVRKCVDCR.LLRK.SPPK-t...........
A0A1A6GSF7_NEOLE/19-48 ....PTPCDQTLCFDPLVRHCVACK.LLRT.PDS--pq..........
A0A3Q2I3M6_HORSE/16-45 ....PTQCAPAQCFDPLVRKCVACH.LLRT.PEPG-s...........
TR13C_MOUSE/19-48 ....PTQCNQTECFDPLVRNCVSCE.LFHT.PDTGH............
F1PL17_CANLF/17-46 ....PTRCVQAECFDPLVRNCVACK.LLWT.PEPRP............
A0A2I0MJJ4_COLLI/20-50 ....-SSCLSSQCFDTLTKLCVECSdLLK-.-----dhttept.....
A0A2K6GIX6_PROCO/16-45 ....PTPCDPAQCFDLLVRHCVACK.LLRT.PEPRP............
A0A1U7TUV1_TARSY/16-45 ....PTPCVQAECFDLLVRHCVACE.FLHT.PQ---lrp.........
A0A287AJ47_PIG/16-45 ....PTQCLQTQCFDLLVRNCVACS.LLRT.PDPGP............
A0A2Y9KN04_ENHLU/19-48 ....PTQCVQAQCFDPLVRNCVACN.LFRT.PEPRP............
A0A091HID2_CALAN/14-44 ....PSSCLYPQCFDPLTRSCVKCSdLFK-.-----nnttlp......
A0A3Q0CJZ6_MESAU/46-75 ....PTPCVQTLCFDPLVRHCVACN.LLRT.PDPLH............
#=GC SS_cons ....----BTTEEEETTTTEEEEGG.GSSS.--S--............
#=GC seq_cons ....PTpClpupCFDsLVRpCVuCp.Lh+T.scs..............
//
