GenomeNet

Database: Pfam
Entry: DUF240
LinkDB: DUF240
Original site: DUF240 
#=GF ID   DUF240
#=GF AC   PF03086.16
#=GF DE   Domain of unknown function (DUF240)
#=GF AU   El-Gebali S;0000-0003-1378-5495
#=GF AU   Mifsud W;0000-0002-9805-6461
#=GF SE   Pfam-B_2385 (release 6.4)
#=GF GA   25.00 25.00;
#=GF TC   26.40 101.00;
#=GF NC   23.40 22.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 57096847 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR004319;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This is a domain of unknown function found in mycoplasma. It is
#=GF CC   found at the N-terminal region.
#=GF SQ   14
#=GS Y035_MYCPN/211-329  AC P75079.1
#=GS Y234_MYCPN/1-119    AC P75537.1
#=GS Y048_MYCPN/93-213   AC P75066.1
#=GS Y512_MYCPN/9-129    AC P75274.1
#=GS Y288_MYCGE/1-120    AC P47530.1
#=GS Y510_MYCPN/75-194   AC P75276.1
#=GS Y032_MYCGE/211-328  AC P47278.1
#=GS Y049_MYCPN/214-334  AC P75065.1
#=GS Y509_MYCPN/1-121    AC P75277.1
#=GS Y042_MYCPN/213-331  AC P75072.1
#=GS Y039_MYCPN/218-336  AC P75075.1
#=GS Y508_MYCPN/94-214   AC P75278.1
#=GS Y096_MYCGE/218-340  AC P47342.2
#=GS Y036_MYCPN/212-331  AC P75078.1
Y035_MYCPN/211-329             .FNLVLQLQIN.RNPVLFDFNLQLKTNNFANQTSFDELFNEKTN.PLNWQFFSKLKVNHLVY.EGNDITQLANTLLQSQFNVLQLDLNKSIYR..LNLNAMAQRFEHDWVQPLYAKRTQAKIAYE..
Y234_MYCPN/1-119               .MQFHAVYQNN.DTKANLDFALNISTINFATLQELQNSFDLQGS.DLTAGLFYKYSVNKLTS.GTNDLTTIAKTALGENIIQKQVSLTQSIIK..PRLEAAKTQYKQDIIAPFAKERQAALAQH-l.
Y048_MYCPN/93-213              .FHFETTYVGT.GGEINLQFALQASTTNFSSLEELQASFSKTGD.NLTAQLFWKPTVTKLVS.GENDLTHIAQTAIGESLFDSRVDLSASIINseATLKTAEATFTTQVLNPFKAEREKALAI--kk
Y512_MYCPN/9-129               .WDFETVYTGV.NSTTNLAFSVKAMTTNFANLQELQDSLVLRGQ.NLTTQLFWKPTVKRLVLgNNNDLTTVAKAAVGDNLFTTQANLTKSVLD.qTVLKEAESRFEATVLKPFIEARQKALAEHQ..
Y288_MYCGE/1-120               .MDFEVDYEGG.NNTVNLQFDLKAQTSNFLNLQELQNSFN--GN.DLNTQLFWKPLINKLVDkNQNDLTSIAKTAVSDSLFLSNTNIFNSVLKidEQLDLAKTKFEKEIIEPFKKEREKAKADYE..
Y510_MYCPN/75-194              .MGFDTVYAGK.NTTI-LKFSLQAQTINFTSLQELRDSFENNGN.TLSTHLFWKPVVEQLTTdGGNDLTNIAKTAIGESLFNLKVNLTDSIID.qSVLQQAQKSFEDKILDPFHAERVEAKRIHD..
Y032_MYCGE/211-328             f-NIALVLSIN.KSNVDFDFDFILKTDNFSDIENFNEIFNRK-P.ALQFRFYTKINVHKLSF.NGSDSTYIANILLQDQFNLLEIDLNKSIYA..LDLENAKERFDKEFVQPLYQKRREAKLAWE..
Y049_MYCPN/214-334             .FHFETTYIGS.GGEINLQFALQASTTNFSSLEELQASFSKVGN.NLTAQLFWKPVVNKLTS.GENDLTHIAQTAVGESLFDSRVDLTSSIINneAAIKTTQQQFETEVLALFKAEREKALAEY-k.
Y509_MYCPN/1-121               .MKFHTVYVGK.NTKIDLDFALQAQTNNFSSLEELRESFTNSGQ.TLSTQLFWKPVIDKLITdEGNDLTTIARTAIGENLFDLKVNLTDSVID.gTVLTKARKSFEERILNPFIEQRKEAKRIHD..
Y042_MYCPN/213-331             i-PLNLELLVN.NQKVTFNITVDLRTNNFSTQETFNELFNKCIG.PVNWQFFSRVKVDKLHY.DQTDATHLANTLLQDQFNALNLDLEKSIYD..LELPRLEAEFQQKYVDPLIEKKQRQKAEWE..
Y039_MYCPN/218-336             i-PLNLELLVN.NQKVTFNITVDLRTNNFSTQETFNDLFNNGTA.PTNWQFFSRIKVNKLHY.DQTDATHLANTLLQDQFNALNLDLQKSIYD..LNLDDLEERFEEEYAKPLREKRTQQKKEWE..
Y508_MYCPN/94-214              .MDFATIYEGD.GSTIDLQFALNASTTNFANLTDLQDSFWQSGK.DLNTQLFWKPSVHKLISnGTNDLTTLAQTALGDSLFDTKVNLTESVIE.iNNQTDVATKFREKVLNSFKQEREKAHAEH-v.
Y096_MYCGE/218-340             .MQFQTVYVGGgNTVINLDFTLKAQTVNFANLQDLQNTFVKVGN.DLSTQLFWIPTVNKLTDnAGNDLTHIAKTVIGESFFQTNVNLAKSVIEydKVQPLVKQAFEERVLTPFKKEREAAKKAYE..
Y036_MYCPN/212-331             i-GLELALLVN.KRPVYFNFSLDLRTNNFSNQAGFNEIFNAPGNaATNWQFFSKVKVKQLNY.DGNDSTHLANTLLQDQFNTLNLNLQKSIYE..LPLTEMETKFQQEYVELLLAKRREEKRLWD..
#=GC seq_cons                  .hsFpssYhss.ssplsLsFsLphpTsNFusLp-Lp-oFspsGs.sLssQLFaKssVsKLs..ssNDLTplApTslu-shhshplsLscSIlc..hsLppscppF-pcllpPFhpcRpcAKtta-..
//
DBGET integrated database retrieval system