GenomeNet

Database: Pfam
Entry: DUF3104
LinkDB: DUF3104
Original site: DUF3104 
#=GF ID   DUF3104
#=GF AC   PF11302.9
#=GF DE   Protein of unknown function (DUF3104)
#=GF AU   Pollington J;0000-0002-8158-8998
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF SE   Pfam-B_4053 (release 23.0)
#=GF GA   20.80 20.80;
#=GF TC   20.80 30.50;
#=GF NC   20.70 20.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR021453;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family of proteins with unknown function appears to be
#=GF CC   restricted to Cyanobacteria.
#=GF SQ   31
#=GS Q46KA1_PROMT/5-65       AC Q46KA1.1
#=GS A9BA82_PROM4/5-69       AC A9BA82.1
#=GS A0A164BGK7_9SYNE/17-88  AC A0A164BGK7.1
#=GS Q05RP9_9SYNE/19-90      AC Q05RP9.1
#=GS A0A164BC92_9SYNE/1-46   AC A0A164BC92.1
#=GS A0A162CUC6_9SYNE/1-64   AC A0A162CUC6.1
#=GS Q7VCN6_PROMA/16-83      AC Q7VCN6.1
#=GS A0A164AHK2_9SYNE/1-64   AC A0A164AHK2.1
#=GS Q46K77_PROMT/5-65       AC Q46K77.1
#=GS A3PB58_PROM0/14-86      AC A3PB58.1
#=GS A0A076H560_9SYNE/19-91  AC A0A076H560.1
#=GS A0A076H2N7_9SYNE/1-70   AC A0A076H2N7.1
#=GS Q7V7X2_PROMM/20-87      AC Q7V7X2.1
#=GS A0A076H317_9SYNE/16-87  AC A0A076H317.1
#=GS A0A2P7EFV8_9SYNE/7-69   AC A0A2P7EFV8.1
#=GS A0A164BH25_9SYNE/1-44   AC A0A164BH25.1
#=GS A5GLW1_SYNPW/19-90      AC A5GLW1.1
#=GS Q3AYQ1_SYNS9/30-104     AC Q3AYQ1.1
#=GS A0A162CRI3_9SYNE/18-89  AC A0A162CRI3.1
#=GS A0A164C4F1_9SYNE/20-91  AC A0A164C4F1.1
#=GS Q0IAM3_SYNS3/20-91      AC Q0IAM3.1
#=GS Q0IA43_SYNS3/20-91      AC Q0IA43.1
#=GS A3Z6N4_9SYNE/1-64       AC A3Z6N4.1
#=GS Q05RS5_9SYNE/20-90      AC Q05RS5.1
#=GS Q46K97_PROMT/21-81      AC Q46K97.1
#=GS A0A164CSR4_9SYNE/9-77   AC A0A164CSR4.1
#=GS Q0IC96_SYNS3/8-48       AC Q0IC96.1
#=GS A0A164CSD8_9SYNE/20-93  AC A0A164CSD8.1
#=GS Q0I8E6_SYNS3/20-91      AC Q0I8E6.1
#=GS Q3AUN3_SYNS9/50-120     AC Q3AUN3.1
#=GS Q3AYZ8_SYNS9/17-89      AC Q3AYZ8.1
Q46KA1_PROMT/5-65                  .....l-FSSVRSGDTILV-.....GEN...E...-...-...--...---ICKVLSFT..GGS..RDPDAPSLFQVANVDTGEIKHVHAAEVKEIV--cr..
A9BA82_PROM4/5-69                  ...lhn----IKRGDYVLV-.....--Q...R...E...A...DK...DWYIAEIIACI..EGP..RIPEDWTFFQVHNIDTGFIELISTDYVKGIVKT....
A0A164BGK7_9SYNE/17-88             ......IFLDVAPGMTVIVKh..dlQTG...E...K...A...EK...DWWMGEVIHCG..GAA..RDPKIHNLFQIADVDTGAIRWVNADLVSHILP-a...
Q05RP9_9SYNE/19-90                 ......VFLSVRPGDFVIVA.....KAT...QvalH...D...DG...DWWMGQVVFCE..GGA..RDPRVNSLFQIADVDDGCIHWVNADQVTHVLH-g...
A0A164BC92_9SYNE/1-46              ......--------MTVIVKnd.dlT-G...E...K...V...DK...DWWMGQVINCN..GAA..RDPSMHTSFQM----------------------qmsi
A0A162CUC6_9SYNE/1-64              ......--------MTVIVKhdyltGES...Q...-...-...DQ...DWWMGQVIHCG..GAA..RDPRVHNLFQIADVDSGVIRWVNADLVSRILP-s...
Q7VCN6_PROMA/16-83                 ......NFLSAKCGDFVAL-.....SSP...Q...S...S...PD...DWWVGMIISQV..GSS..INPSINTLFQVINIDTGIVKVVNADFVRGIIQT....
A0A164AHK2_9SYNE/1-64              ......--------MTVIVRcdhrvGEK...Q...-...-...DK...DWWMGQVIHCG..GAA..RDPKIHNLFQIADVDTGAIRWVNADLVSHILP-s...
Q46K77_PROMT/5-65                  .....l-FLKVKCGDAVLY-.....EKD...Q...-...-...--...---IGKVLTFV..GGS..RDPYAPSLFQIANVDSGEIRWIHGEEVTDIVS-e...
A3PB58_PROM0/14-86                 .....e-FLFVKPGDYVAIKke.ncENT...N...E...K...NK...NYWVGHVIDCI..GGA..RNPNSWTLFQVANIDNGEITIINADIVEKILK-p...
A0A076H560_9SYNE/19-91             .....l-FLSVKAGMTVIVRhlppcG-L...D...T...E...ED...RWWMADVIHVD..GGA..RNPKMPTLFQVADVDTGTVQWINADLVTHIVP-r...
A0A076H2N7_9SYNE/1-70              .....m---SFKPGDLVLVQp..dsEKP...G...V...S...EP...EWWMGWVVFCE..GNA..RDPIALSLFQVADCDDGCIRWVNADEATRLV--ls..
Q7V7X2_PROMM/20-87                 ......IFLAVTCGDVVIVQ.....DNQ...R...H...A...PE...SWWMGEVIHIV..SGA..RGPD-PSLFQVACIDTGVIKTVNADQVTKVVRS....
A0A076H317_9SYNE/16-87             ......VFLDLKPGDIVIVW.....DHP...EivgS...D...ET...AWWMGQVIVLE..GSA..RNPKAPSLVQVADVDTGVIRWVNADCIEQIL--mp..
A0A2P7EFV8_9SYNE/7-69              .....l-FLAVRVGDVVAV-.....APP...R...-...-...-Q...QVFLAQVICCE..GGA..RTAE-PSLLQVLREDDLAVITVNADWVI-----drla
A0A164BH25_9SYNE/1-44              ......--------------.....---...-...-...-...--...---MGQVIHCG..GAA..QDPKIHNLSQIADVDSGVIRWVNADLVTHVTP-d...
A5GLW1_SYNPW/19-90                 ......IFLGLKPGMTVIVRhdsllGEA...Q...-...-...EK...DWWMGLVLHCN..GGA..RDPSIYTLFQIADVDTGVVRWVNADLVTHVLPK....
Q3AYQ1_SYNS9/30-104                ...vvp---ALKPGDLVLVE.....PNG...R...S...S...EDpstDWWIGWITHSEetTGAvtVGPR-ENTFQASDCETGQLRSVKGNEATRLV--ls..
A0A162CRI3_9SYNE/18-89             .....g-FLDVKPGMKVIMR.....NDE...R...A...CetqNQ...DWWMAEVIHCG..GAA..RDPSIHTLFQVADVDSGVIRWINADLVTHILA-e...
A0A164C4F1_9SYNE/20-91             ....gv--LAVRPGNFVIIR.....AQQ...Q...IdkpV...ND...DWWMGQILWCE..PEV..RAPRVNALLQVANVDDGALHWVKAETVAHVVH-a...
Q0IAM3_SYNS3/20-91                 .....a-FLGVKPGDYIIVK.....GEN...QvelK...K...DH...SWWMGQVVSCK..QEA..RDPSGHHVIQVVDVDDEKISWVNVDEISHVL--yg..
Q0IA43_SYNS3/20-91                 .....t-FLSVKTGDWVIIQa..qqQTA...Q...Q...L...ND...QWWMGQVIFCE..GGA..RDPRVKTMFQVSNVDNGCIRWVNGDEVTHVVRS....
A3Z6N4_9SYNE/1-64                  ......--------MTVVVRhdplpGEA...L...-...-...DQ...DWWMGQVVHCS..GGA..RDPKAWTLFQIADVDSGVIRWVNADLILQVL--me..
Q05RS5_9SYNE/20-90                 .....a-FLSVRPGQYVVVQ.....DTAalgQ...E...E...SK...NWWMGQVVFCE..-KA..RAPKVNSRFQIADVDDGEIRWVNADQVSHVL--wg..
Q46K97_PROMT/21-81                 .....l-FLKVRSRDTVLV-.....GES...E...-...-...--...---ICKVLSFT..GGS..RDPDAPSLFQVANVDTGEIKHVHAAEVKEIVS-t...
A0A164CSR4_9SYNE/9-77              .....p-FIGVKAGDLVLVQs...tLNP...D...P...T...DT...DWWMGWIVGNP..DQF..NEIHGVKMLAVVDTDSGELRHVKAEQTTR----ls..
Q0IC96_SYNS3/8-48                  yslkgg--------------.....---...-...-...-...--...-----------..-AT..RAQKAHNFFQIADVDSGVIRWVNADLVTPILPK....
A0A164CSD8_9SYNE/20-93             .....p-FLSIRPGQFVIVReltpaSER...V...D...I...ER...NWWLGQVIFCE..GWE..KHSRLNSLFQVADVDDGAIRWVHPTQVTHVLH-g...
Q0I8E6_SYNS3/20-91                 .....a-FLGVNTGDFVIVQa..enHDA...S...K...V...DG...NWWMGQVVFCE..GGS..RDPMVNTMFQVSDVDDGFIHWVNGDEVKHIVRS....
Q3AUN3_SYNS9/50-120                ....lv--LSVQAGDVVIVWa...sQEA...K...S..tQ...SK...DWWMGEVLRVE..TEG..MDGEPSPLLQVADVETGMVCLVECDQVQRV---ri..
Q3AYZ8_SYNS9/17-89                 ......IFLSVKAGMTVIVRhl.peVGF...T...S...D...DD...RWWMADVIYVE..GGA..RNPSVPTLFQVADVDSGEVLWVNADLVTHIVP-r...
#=GC seq_cons                      .......FLsl+sGphVlVp.....sps...p...........pp...sWWMGpVlpCp..GuA..RcPcs.oLFQVADVDoGhI+WVNAD.Vo+ll......
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