GenomeNet

Database: Pfam
Entry: DUF5093
LinkDB: DUF5093
Original site: DUF5093 
#=GF ID   DUF5093
#=GF AC   PF17011.6
#=GF DE   Domain of unknown function (DUF5093)
#=GF AU   Coggill P;0000-0001-5731-1588
#=GF SE   c_1853 - Hirt RP, Nakjang S
#=GF GA   27.00 27.00;
#=GF TC   47.20 47.10;
#=GF NC   26.50 26.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   24259309
#=GF RT   Reduction and expansion in microsporidian genome evolution: new
#=GF RT   insights from comparative genomics.
#=GF RA   Nakjang S, Williams TA, Heinz E, Watson AK, Foster PG, Sendra
#=GF RA   KM, Heaps SE, Hirt RP, Martin Embley T;
#=GF RL   Genome Biol Evol. 2013;5:2285-2303.
#=GF DR   INTERPRO; IPR031533;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a family of microsporidial sequences that may be
#=GF CC   distantly related to RRP7, Pfam:PF12923,
#=GF CC   ribosomal-RNA-processing protein 7.
#=GF SQ   16
#=GS R0MC79_NOSB1/4-112      AC R0MC79.1
#=GS A0A437AN02_9MICR/5-128  AC A0A437AN02.1
#=GS S7XKX3_SPRLO/5-104      AC S7XKX3.1
#=GS J9D7M4_EDHAE/5-133      AC J9D7M4.1
#=GS L2GR15_VAVCU/9-134      AC L2GR15.1
#=GS A0A0F9WNJ4_9MICR/2-127  AC A0A0F9WNJ4.1
#=GS L7JXK3_TRAHO/9-134      AC L7JXK3.1
#=GS C4VBT1_NOSCE/2-127      AC C4VBT1.1
#=GS H8ZAU1_NEMS1/6-139      AC H8ZAU1.1
#=GS A0A177EK14_9MICR/6-134  AC A0A177EK14.1
#=GS I3EIL2_NEMP3/6-139      AC I3EIL2.1
#=GS A0A059F548_9MICR/5-127  AC A0A059F548.1
#=GS Q8STM8_ENCCU/4-129      AC Q8STM8.1
#=GS R0ML98_NOSB1/4-130      AC R0ML98.1
#=GS A0A059F5F0_9MICR/1-71   AC A0A059F5F0.1
#=GS L2GKE0_VITCO/11-132     AC L2GKE0.1
R0MC79_NOSB1/4-112                 ..LVLNFPFKINKIKTQHIYKTKIERKENLISFALNWRYPITIEGAT-----CLSISNEND...LFLY..VFKLEDINKAIDFMENTSVDVQRILEFTDVEKLVDKTNKLMIKYEKNRK-.------------------ri..
A0A437AN02_9MICR/5-128             ..IKLIFPFKLNDTFHSASLKTIIILKESTISFSLPFNLNLKIVNAE-----LKKHSKINQ...TYFY..VFTFDELVYAKEFMHQPQMFVMKESVYRNREELEDETNKFLDEYESTKK-.-KRVKQVLIEHEDGFCEF....
S7XKX3_SPRLO/5-104                 .f-KFIFPHKIENISNIIEYEITFNRKENVISFELPFDIKINVNDVQ------IKQEKNN-...---Y..FLKFININKCLKFLKNPEINVCDELEIENVKDLEGRMNKVLEE-------.------------------kyqk
J9D7M4_EDHAE/5-133                 ..LKINFPFNLKSVQNFHEFLISYEQNKNVIKFSLPIKINLRTSNNLHINYEETQTNKSKK...DYLY..TIIFEKMADVREFINDPQLYAISGLNDLSVQEVEAEANRKMLDYEKHEK-.-KNNFKTMVEDEDGWIRF....
L2GR15_VAVCU/9-134                 ..INLIFPFDVPGVANKVALSVTTHIKGEIVSFALPFRLLFLTKPPNNSHPYSIKVKKNGD...MFVY..VLKFESI-DLKRFLEKWELHVLKEVA-EEYEEIMKEMDEKMEEYEQRE--.-KTGKKRKIVDDDGWVRY....
A0A0F9WNJ4_9MICR/2-127             ..LKLHFNFTVDKENTSTEVKTFIERKENIVSFSLEYKMKIIVDKGK-----CISVQKCDK...GYIY..VFEFGNINDALFFEENKECKVISSSFFCDPKDIEKDIVNYAEHYINTKGI.KKKQRKRLIEDENGFKRY....
L7JXK3_TRAHO/9-134                 ..ITLVFPFNVPGITNRVTLSTTMHTRDATLSFALPFLLAFTTKPPNNSYPYAVKVKKSND...MFVY..ILKFEPI-DLKRFIVNCELHVVKEMA-DEYEEITREMDERMEEYERTE--.-KMGKKKKIVDDDGWIRY....
C4VBT1_NOSCE/2-127                 ..LKLHFNFTVDKENTSTEVKTFIERKENIVSFSLEYKMKIIVDKGK-----CISVQKCDK...GYIY..VFEFGNINDALFFEENKECKVISSSFFCDPKDIEKDIVNYAEHYINTKGI.KKKQRKRLIEDENGFKRY....
H8ZAU1_NEMS1/6-139                 ..ITVCFPFKLQGVEYRTKLHTPLTRKENIVIFSLPFNSLIRVNSEKSYSVKYIVTEKKEAdvmRILYqiIIEFKSINDAIDFFNTPVVHV-SYSETTLLQNLDEKLAEASDILEKTGQS.WKKKRKTEV-DEEGYFTC....
A0A177EK14_9MICR/6-134             vl--LKFPFRIDGREHSYPLESNLIRQENIVTFALPFRALVSVNAENTYTVHYTRLAKNTC...GTSV..TIEFKSINDAIAFIQQPEAHICYFSE-QELFSVDSELERVSSKLEETRAY.WKKRKRTTREDVEGY---rl..
I3EIL2_NEMP3/6-139                 ..ITVCFPFKLQSTEFKSQYPTPVLRQEGTVAFTLPFNALINVSSEKSYTVSYTKKQKNDGteaGFIYqiIIDFTSINDAIDFCSNPIIHV-SYNEVSDLSSLDKKLEEASDLLEKTGQS.WRKKRKAET-DEDGYFT-a...
A0A059F548_9MICR/5-127             .v-KFIFPFKIDNKEYSTTLSIQIARKESTISFSLPFNLYLSINNAT-----IQKHSKISK...NFLY..VFTFEELIHAKEFMDDPIIFVLNESIYKSREVLEKETNEFFDNFKEKK--.-KSSKKVLIEHEDGFFEY....
Q8STM8_ENCCU/4-129                 ..LEVEFPFRIGKAHPKLKMDVAMERKEDLVSFSMKYDMDLVVDDAE-----LKSKEEVRG...EFVY..VYRFVDLDTAIEFMESRCARAVVGERLLDVEKVEKEMDLFMEKYEAGERR.LKKKKKTIVVGEDGFMKY....
R0ML98_NOSB1/4-130                 ..LVLNFPFKINKIKTQHIYKTKIERKENLISFALNWRYPITIEGAT-----CLSISNEND...LFLY..VFKFEDINKAIDFMENTSVDVQRILEFTDVKKLVDKTNKLMIEYEKNEKGfKRNKKKKLIEDNDGFMRY....
A0A059F5F0_9MICR/1-71              .s----------------------------------------------------------K...NFLY..VFTFEELIHAKEFMDDPIIFVLNESIYKSREVLEKETNEFFDNFKEKK--.-KSSKKVLIEHEDGFFEY....
L2GKE0_VITCO/11-132                ..LNLKFPFTVGGAERISKIQIKTERSMAVVSFSLPFNIQMNIQNAQ-----QVSLEKRGD...KFIY..VFEFESVDDAVEWVGSKNATVQQKSRSDDVKALQREMNEFMIAYESKE--.-KKKRKKLV-DEDGFEYY....
#=GC seq_cons                      ..lplpFPFclsshppptphpsthpRKEsllSFuLPaph.lplsssp.....hhphpKpsc...talY..VhcFcsIscAl-FhcssplcVhptsthp-hccl-c-hschh-cYEpsct...Kpp+Kphl.DEDGahca....
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