GenomeNet

Database: Pfam
Entry: DUF5560
LinkDB: DUF5560
Original site: DUF5560 
#=GF ID   DUF5560
#=GF AC   PF17715.2
#=GF DE   Family of unknown function (DUF5560)
#=GF AU   El-Gebali S;0000-0003-1378-5495
#=GF SE   cORF:C3orf36
#=GF GA   25.00 25.00;
#=GF TC   113.40 36.80;
#=GF NC   23.30 23.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR040620;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a family of unknown function found in primates.
#=GF SQ   15
#=GS CC036_HUMAN/1-165        AC Q3SXR2.1
#=GS A0A2K6SX03_SAIBB/1-73    AC A0A2K6SX03.1
#=GS A0A2K6AAI1_MANLE/69-142  AC A0A2K6AAI1.1
#=GS A0A2K5UZ43_MACFA/1-137   AC A0A2K5UZ43.1
#=GS A0A1D5Q893_MACMU/1-162   AC A0A1D5Q893.1
#=GS A0A2K6SX03_SAIBB/70-132  AC A0A2K6SX03.1
#=GS A0A2I3MEY1_PAPAN/1-122   AC A0A2I3MEY1.1
#=GS A0A2K5LTR6_CERAT/76-134  AC A0A2K5LTR6.1
#=GS A0A2K6BT00_MACNE/1-144   AC A0A2K6BT00.1
#=GS A0A2K5QLR9_CEBCA/23-64   AC A0A2K5QLR9.1
#=GS A0A2I3GHG8_NOMLE/1-137   AC A0A2I3GHG8.1
#=GS A0A2K6AAI1_MANLE/1-76    AC A0A2K6AAI1.1
#=GS A0A2K5LTR6_CERAT/1-85    AC A0A2K5LTR6.1
#=GS A0A2K5QLR9_CEBCA/58-113  AC A0A2K5QLR9.1
#=GS A0A2K5D7I4_AOTNA/18-131  AC A0A2K5D7I4.1
CC036_HUMAN/1-165                   ..................MQAETILEGLEAGLPQAVSSGLSLVPAPGLVLTCLSAPSGPGGMALEPPPTTLRKAFLAQSTLLEST..LEGAPEWAAPHPEEQRRS.PPACSQHTPP.LPSTPTG..PPPCSPGG.NHPLCALSGRGGGRCSIPSLSSSSTFSLFSSGCWNPRVKLRVRKSQSQGRAGQLI...................
A0A2K6SX03_SAIBB/1-73               ..................IQAETVLAGLGAGLHQAVRSGLCLVLAPGSWLICASTHSGPGGMASEPPPAGLRKAFLAQSTLLEST..LE----------------.----------.-------..--------.-------------------------------------------------------rlls...............
A0A2K6AAI1_MANLE/69-142             .........plekgrgav-------------------------------------------------------------------..------------------.----------.LPRAPSTlhPCPAYPWG.PH----LGELVATALSPPSLPSSSTFSLFSSGRWNPSVKVRVRKSQSQGRAG---...................
A0A2K5UZ43_MACFA/1-137              ..................IQAETILEGLEAGLPQAVSSGLSLVLAPGLVLTCPSAHSGPEGTASEAPPTRLRKAFLAQSTLLES-..---------PEPLE--KG.LLSASRHTPRiLPHAPST..LHPC-PG-.ELVATAL--------SPPSLPSSSTFSLFSSGRWNPSVKVRVRKA----------gql................
A0A1D5Q893_MACMU/1-162              ..................IQAETILEGLEAGLPQAVRSGLSLVLAPGLVLTCPSAHSGPEGTASEAPPTRLRKAFLAQSTLLESPepLEKGLLSASRHTPRSRGAvLPRAPSTLHP.CPAYPWG..PHLAHLGRtTHSAPAQGELVATALSPPSLPSSSTFSLFSSGRWNPSVKVRVRKA----------gql................
A0A2K6SX03_SAIBB/70-132             ................rl-------------------------------------------------------------------..------------------.----------.LSGTPTE..LPPCPPGR.NHPLCPCSGRGGGRCSTPSFPSSSTFSVFSSGV---------RKPQSQGRVGLL-i..................
A0A2I3MEY1_PAPAN/1-122              ..................IQAETILEGLEAGLPQAVSSGLSLVLAPGLVLTCPSAHSGPEGTASEAPPTRLRKAFLAHSTLLE--..-EGAPECVAPHPEEQRRS.PSACSQHTPP.LPSIPMG..PPPCPPGE.NHPLCPRSGRVGGH-----------------------------------------l..................
A0A2K5LTR6_CERAT/76-134             sgppypwgphlgelvata-------------------------------------------------------------------..------------------.----------.-------..--------.--------------LSPPSLPSSSTFSLFSSGRWNPSVKVRVRKSQSQGRAGQLI...................
A0A2K6BT00_MACNE/1-144              ..................IQAETILERLEAGLPQAVSSGLSLVLAPGLVLTCPSAHSGPEGTASEAPPTSLRKAFLAQSTLLES-..---------PEPLE--KG.LLSASRHTPRiLPRAPST..LHPC-PG-.ELVATAL--------SPPSLPSSSTFSLFSSGRWNPSVKVRVRKSQSQGRAGQLI...................
A0A2K5QLR9_CEBCA/23-64              .................w----------------------------------------PEGMASEPPPARLRKAFLAQSTRLEST..LERL-------LKEQRRS.PP--------.-------..--------.-------------------------------------------------------p..................
A0A2I3GHG8_NOMLE/1-137              ..................IQAETILEGLEAGLPQAVSTGLSLVPAPGLVLTFPSAHSGPGGMTSEPPPTRLRKAFLAQSTLLEST..VEGAPEWAAPHREEQRRS.PPACSQHTPP.LPSTPRG..PPPCPPGG.NHPLCPRSGSGGGRFR---------------------------------------ksvsrqsgaan........
A0A2K6AAI1_MANLE/1-76               ..................IQAETILEGLEAGLPQAVSSGLSLVLAPGLVLTCPSAHSGPEGTASEAPPTRLRKAFLAHSTLLES-..------------------.----------.-------..--------.-------------------------------------------------------peplekgrga.........
A0A2K5LTR6_CERAT/1-85               ..................IQAETILEGLEAGLPQAVSSGLSLVLAPGLVLTCPSAHSGPEGTASEAPPTRLRKAFLAHSTLLQS-..------------------.----------.-------..--------.-------------------------------------------------------peplqkgllsgppypwgph
A0A2K5QLR9_CEBCA/58-113             .............qrrsp-------------------------------------------------------------------..------------------.----------.------P..PPPCPPGR.NHPLCPCSGRDGGRCSTPSLPSSSTFSVFSSGCWNPSVK----------------qmg................
A0A2K5D7I4_AOTNA/18-131             ...............vrr----------------------------------------PGGMASEPPPARLKKAFLAQSTLLEST..LEETPEWAKPHTQRSRG-.--A----IPR.LPSAPTE..PPPCPPGR.NHPLCPCSGRGGGCCSTPSLPSSSTFSVFSSGCWNPSVKQRQKASVS--------r..................
#=GC seq_cons                       ..................hQAETlLttLtAGL.QAVpoGLsLV.APG.hLhh.Ss.SGPtGhASEsPPspLRKAFLApSTLLES.................................hsthP.t....Ps.PG..phshssh........S.PShsSSSTFSlFSSGh.........................................
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