GenomeNet

Database: Pfam
Entry: DUF5874
LinkDB: DUF5874
Original site: DUF5874 
#=GF ID   DUF5874
#=GF AC   PF19202.1
#=GF DE   Family of unknown function (DUF5874)
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Moenttinen H;0000-0003-2461-0690
#=GF SE   Manual
#=GF GA   27.10 27.10;
#=GF TC   31.10 27.10;
#=GF NC   26.70 26.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a family of uncharacterised proteins of unknown function
#=GF CC   predominantly found in Phycodnaviridae. This entry includes
#=GF CC   proteins that are also found in Fungi.   
#=GF SQ   33
#=GS A7K940_9PHYC/275-349      AC A7K940.1
#=GS A7IXT1_PBCVN/371-418      AC A7IXT1.1
#=GS A7RBS8_PBCVA/284-357      AC A7RBS8.1
#=GS A0A1J0F9M8_9PHYC/284-369  AC A0A1J0F9M8.1
#=GS Q98430_PBCV1/138-186      AC Q98430.2
#=GS A7IXT4_PBCVN/392-464      AC A7IXT4.1
#=GS Q98442_PBCV1/280-353      AC Q98442.2
#=GS A7K9C7_9PHYC/403-465      AC A7K9C7.1
#=GS A7RCD8_PBCVA/439-481      AC A7RCD8.1
#=GS A7J7U7_PBCVF/299-367      AC A7J7U7.1
#=GS A7IXT1_PBCVN/324-397      AC A7IXT1.1
#=GS A7IX49_PBCVN/132-179      AC A7IX49.1
#=GS A0A1J0FA05_9PHYC/392-467  AC A0A1J0FA05.1
#=GS O41047_PBCV1/433-472      AC O41047.2
#=GS A7RCD4_PBCVA/324-397      AC A7RCD4.1
#=GS A0A1J0F9P3_9PHYC/201-241  AC A0A1J0F9P3.1
#=GS A7RCD4_PBCVA/371-419      AC A7RCD4.1
#=GS O41043_PBCV1/323-396      AC O41043.1
#=GS A7RCD8_PBCVA/392-463      AC A7RCD8.1
#=GS A7K9C1_9PHYC/329-384      AC A7K9C1.1
#=GS A7IXT4_PBCVN/439-478      AC A7IXT4.1
#=GS A7IX58_PBCVN/269-342      AC A7IX58.1
#=GS A7RBR9_PBCVA/212-258      AC A7RBR9.1
#=GS A7IUX1_PBCVM/300-370      AC A7IUX1.1
#=GS A0A1J0F9Z0_9PHYC/331-406  AC A0A1J0F9Z0.1
#=GS O41047_PBCV1/386-456      AC O41047.2
#=GS A7RBR9_PBCVA/136-183      AC A7RBR9.1
#=GS A0A1J0F9P3_9PHYC/139-184  AC A0A1J0F9P3.1
#=GS A0A1J0FA05_9PHYC/440-482  AC A0A1J0FA05.1
#=GS O41043_PBCV1/370-409      AC O41043.1
#=GS A0A1J0F9Z0_9PHYC/394-419  AC A0A1J0F9Z0.1
#=GS Q98430_PBCV1/215-260      AC Q98430.2
#=GS A7IX49_PBCVN/208-254      AC A7IX49.1
A7K940_9PHYC/275-349                 ...n-NKCVCDA..AKGAVAK..DGACVC--ADGYVWN..G..T..TCVKTQCPD-GQVMVGDKCACPLGQVLGSD..GK-CVC------apgyradgfgc..
A7IXT1_PBCVN/371-418                 ....KGQCVCDP..RQGVTWD..GKSCVCDMKNGWNWD..G..K..KCVKSS------------------------..------------ggsggntsgt...
A7RBS8_PBCVA/284-357                 ....NGKCICDP..AKGVVLK..DNDCVCDYDNGWSWD..G..S..KCVKSLACQPNQILLEGKCICDVNKGFVSN..GKDCVCDTKNNW.............
A0A1J0F9M8_9PHYC/284-369             ....NGKCICDP..AKGVISK..DGDCVCDYDNGWSWD..G..S..KCVKSTTCSKNQILSGNKCICDASKGYVMS..GKDCVCDTAKGWvsdgfgcmkktv.
Q98430_PBCV1/138-186                 ....NGNCVCDT..KSGKTWN..GSKCVCDKSRGLKWD..S..KtkRC----------------------------..------------rnkqdgrtastpv
A7IXT4_PBCVN/392-464                 ....KGQCVCDP..RQGVTWD..GKGCVCDMKNGWNWD..G..K..KCVKGACPQFQTRDSKGQCVCDPRQGVTWD..GKSCVCDMKNG-.............
Q98442_PBCV1/280-353                 ....NGKCVCDP..AKGVVLK..DNDCVCDYDGGWSWD..G..S..KCVKSLSCQPNQILSGSKCVCDASKGFVSD..GKDCVCDTKNNW.............
A7K9C7_9PHYC/403-465                 ....NGKCICDPnpANGVTWD..GKNCVCDYNAGFTWN..E..KtrKCVKSAAPKPSPSPSGGGC-----------..------------psggwkda.....
A7RCD8_PBCVA/439-481                 ....KGQCVCDP..RQGVTWD..GKGCVCDMKNGWNWD..G..K..KCVKS-------------------------..------------gggggg.......
A7J7U7_PBCVF/299-367                 ....DGKCVCDE..SKGAVSN..NGMCVC--GEGFVWD..G..S..KCVKSQMCPPNQTNVNGKCECAPGYERNSK..GV-CVC--KVGY.............
A7IXT1_PBCVN/324-397                 ....KGQCVCDP..RQGVTWD..GKGCVCDMKNGWNWD..G..K..KCVKGACPQFQTRDSKGQCVCDPRQGVTWD..GKSCVCDMKNGW.............
A7IX49_PBCVN/132-179                 ....NGNCVCDT..KSGKTWN..GSKCVCDKSRGLKWD..S..KtkRC----------------------------..------------rnkqdgrtastp.
A0A1J0FA05_9PHYC/392-467             ....QGVCRCDP..KQGVTWD..GKSCVCDTANGWNWN..G..K..RCVKGACPKFRTYDSKGQCVCDPRQGVTWDpvKKDCVCDEKNGW.............
O41047_PBCV1/433-472                 ....KGQCVCDP..RQGVTWD..GKGCVCDMKNGWNWD..G..K..KCVKS-------------------------..------------ggg..........
A7RCD4_PBCVA/324-397                 ....KGQCVCDP..RQGVTWD..GKSCVCDMKNGWNWD..G..K..KCVKGACPQFQTRDSKGQCVCDPRQGVTWD..GKSCVCDMKNGW.............
A0A1J0F9P3_9PHYC/201-241             wrgd--RCQCDY..DNGLWWD..GKACICDTGKGWVWD..G..NkgKCVR--------------------------..------------k............
A7RCD4_PBCVA/371-419                 ....KGQCVCDP..RQGVTWD..GKSCVCDMKNGWNWD..G..K..KCVKSS------------------------..------------gggggggntsg..
O41043_PBCV1/323-396                 ....KGQCVCDP..RQGVTWD..GKSCVCDMKNGWNWD..G..K..KCVKGACPQFQTRDSKGQCVCDPKQGVTWD..GKGCVCDMKNGW.............
A7RCD8_PBCVA/392-463                 ....KGQCVCDP..RQGVTWD..GKSCVCDMKNGWNWD..G..K..KCVKGACPQFQTRDSKGQCVCDPRQGVTWD..GKGCVCDMKN--.............
A7K9C1_9PHYC/329-384                 ....NGQCVCDE..KNGLVWD..GKNCVCDYNRGFEWDerS..R..KCVKSKTPAP--------------------..------------spspppsggqit.
A7IXT4_PBCVN/439-478                 ....KGQCVCDP..RQGVTWD..GKSCVCDMKNGWNWD..G..K..KCVKS-------------------------..------------ggg..........
A7IX58_PBCVN/269-342                 ....NGKCICDP..SQGVISK..DGDCVCNYDDGWSWD..G..S..KCVKSLACQPNQILLEGTCICDVNKGFVSN..GKDCVCDTKNNW.............
A7RBR9_PBCVA/212-258                 wngs--KCECDY..ANGLWWN..GKDCVCDTGKGWEWN..G..T..KCVNK-------------------------..------------ynswdrkk.....
A7IUX1_PBCVM/300-370                 ....DGKCVCDE..SKGAVSN..NGVCVC--GEGFVWD..G..S..KCIKSQMCPPNQTNVNGKCECAPGYERNSK..GV-CVC--KG--gyrf.........
A0A1J0F9Z0_9PHYC/331-406             ....QGVCRCDP..KQGVKWD..GKSCVCDTANGWNWN..G..K..RCVKGACPKFRTYDSKGQCVCDPRQGVTWDpvKKDCVCDEKNGW.............
O41047_PBCV1/386-456                 ....KGQCVCDP..RQGVTWD..GKSCVCDMKNGWNWD..G..K..KCVKGACPQFQTRDSKGQCVCDPRQGVTWD..GKGCVCDMK---.............
A7RBR9_PBCVA/136-183                 ....NGNCVCDT..KSGKTWN..GSKCVCDKSRGLKWD..S..KtkRC----------------------------..------------rnkqdgrtastp.
A0A1J0F9P3_9PHYC/139-184             ....DGNCVCDG..NQGKTWN..GSKCVCDKSRGLKWD..S..KtkRC----------------------------..------------rnkhdgrtas...
A0A1J0FA05_9PHYC/440-482             ....-GQCVCDP..RQGVTWDpvKKDCVCDEKNGWNWD..SknK..RCVKSS------------------------..------------gg...........
O41043_PBCV1/370-409                 ....KGQCVCDP..KQGVTWD..GKGCVCDMKNGWNWD..G..K..KCVKS-------------------------..------------ggg..........
A0A1J0F9Z0_9PHYC/394-419             ...v--------..-------..KKDCVCDEKNGWNWD..G..K..KCVKSS------------------------..------------gg...........
Q98430_PBCV1/215-260                 .ngs--KCECDY..SQGVAWN..GKDCVCDTSKGFEWN..G..T..KCVNK-------------------------..------------wnswdrkk.....
A7IX49_PBCVN/208-254                 wngs--KCECDY..ANGLWWN..GKDCVCDTGKGWEWN..G..T..KCVNK-------------------------..------------ynswdrkk.....
#=GC seq_cons                        ....pGpCVCDP..cpGVsWc..GKsCVCDhpsGWsWD..G..K..KCVKu....................................................
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