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Database: Pfam
Entry: Delta_lysin
LinkDB: Delta_lysin
Original site: Delta_lysin 
#=GF ID   Delta_lysin
#=GF AC   PF05372.12
#=GF DE   Delta lysin family
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF SE   Pfam-B_45919 (release 7.8)
#=GF GA   25.00 25.00;
#=GF TC   26.20 46.80;
#=GF NC   24.90 19.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   12206677
#=GF RT   Mechanism and kinetics of delta-lysin interaction with
#=GF RT   phospholipid vesicles. 
#=GF RA   Pokorny A, Birkbeck TH, Almeida PF; 
#=GF RL   Biochemistry 2002;41:11044-11056.
#=GF DR   INTERPRO; IPR008034;
#=GF DR   SCOP; 2dtb; fa;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Delta-lysin is a 26 amino acid, hemolytic peptide toxin secreted
#=GF CC    by Staphylococcus aureus. It is thought that delta-toxin  forms
#=GF CC   an amphipathic helix upon binding to lipid bilayers [1]. The
#=GF CC   precise mode of action of delta-lysis is unclear.
#=GF SQ   6
#=GS A0A1V1YX01_9ACTN/7-31   AC A0A1V1YX01.1
#=GS A0A3F2TYA7_9RHIZ/19-43  AC A0A3F2TYA7.1
#=GS K9AV30_9STAP/1-25       AC K9AV30.1
#=GS Q5HMY6_STAEQ/1-25       AC Q5HMY6.1
#=GS HLD_STAA8/1-25          AC Q2FWM8.3
#=GS A0A1V1YX40_9ACTN/1-25   AC A0A1V1YX40.1
A0A1V1YX01_9ACTN/7-31              MTADIISTIGDFVKWILDTVKKFTK
A0A3F2TYA7_9RHIZ/19-43             MAQDIISTIGDLVKWIIDTVNKFTK
K9AV30_9STAP/1-25                  MAGDIIGTINDLIKWIADTVEKYKK
Q5HMY6_STAEQ/1-25                  MAADIISTIGDLVKWIIDTVNKFKK
HLD_STAA8/1-25                     MAQDIISTIGDLVKWIIDTVNKFTK
A0A1V1YX40_9ACTN/1-25              MAADIISTIGDLVKLIINTVKKFQK
#=GC seq_cons                      MAuDIISTIGDLVKWIIDTVpKFpK
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