GenomeNet

Database: Pfam
Entry: Ebola_NP
LinkDB: Ebola_NP
Original site: Ebola_NP 
#=GF ID   Ebola_NP
#=GF AC   PF05505.13
#=GF DE   Ebola nucleoprotein
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_8475 (release 8.0)
#=GF GA   25.00 25.00;
#=GF TC   27.90 27.90;
#=GF NC   22.40 22.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   9657001
#=GF RT   DNA vaccines expressing either the GP or NP genes of Ebola virus
#=GF RT   protect mice from lethal challenge. 
#=GF RA   Vanderzanden L, Bray M, Fuller D, Roberts T, Custer D, Spik K,
#=GF RA   Jahrling P, Huggins J, Schmaljohn A, Schmaljohn C; 
#=GF RL   Virology 1998;246:134-144.
#=GF DR   INTERPRO; IPR008609;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of Ebola and Marburg virus nucleoproteins.
#=GF CC   These proteins are responsible for encapsidation of genomic RNA.
#=GF CC   It has been found that nucleoprotein DNA vaccines can offer
#=GF CC   protection from the virus [1].
#=GF SQ   13
#=GS B8XCM7_9MONO/19-734      AC B8XCM7.1
#=GS B8XCM7_9MONO/19-734      DR PDB; 5DSD A; 641-734;
#=GS B8XCM7_9MONO/19-734      DR PDB; 5VKD A; 641-734;
#=GS A0A2P1GML8_9MONO/9-471   AC A0A2P1GML8.1
#=GS A0A068J945_9MONO/19-734  AC A0A068J945.1
#=GS A0A091CLL8_FUKDA/1-109   AC A0A091CLL8.1
#=GS NCAP_MABVM/1-691         AC P27588.3
#=GS NCAP_MABVM/1-691         DR PDB; 4W2O H; 632-691;
#=GS NCAP_MABVM/1-691         DR PDB; 4W2Q D; 633-691;
#=GS NCAP_MABVM/1-691         DR PDB; 4W2Q B; 632-691;
#=GS NCAP_MABVM/1-691         DR PDB; 4W2O F; 632-691;
#=GS NCAP_MABVM/1-691         DR PDB; 6APP B; 632-691;
#=GS NCAP_MABVM/1-691         DR PDB; 4W2O B; 632-691;
#=GS NCAP_MABVM/1-691         DR PDB; 4W2Q H; 633-691;
#=GS NCAP_MABVM/1-691         DR PDB; 4W2Q F; 632-691;
#=GS NCAP_MABVM/1-691         DR PDB; 4W2O D; 632-691;
#=GS L7REU1_9MONO/19-734      AC L7REU1.1
#=GS A0A343EQE8_9MONO/19-734  AC A0A343EQE8.1
#=GS NCAP_EBOSU/19-734        AC Q5XX08.1
#=GS NCAP_MABVA/1-691         AC Q1PD53.1
#=GS NCAP_EBOZM/19-734        AC P18272.2
#=GS NCAP_EBOZM/19-734        DR PDB; 4ZTI B; 38-365;
#=GS NCAP_EBOZM/19-734        DR PDB; 4Z9P A; 36-350;
#=GS NCAP_EBOZM/19-734        DR PDB; 4YPI D; 39-385;
#=GS NCAP_EBOZM/19-734        DR PDB; 4ZTI A; 38-362;
#=GS NCAP_EBOZM/19-734        DR PDB; 6C54 A; 39-385;
#=GS NCAP_EBOZM/19-734        DR PDB; 4YPI C; 38-385;
#=GS NCAP_EBOZM/19-734        DR PDB; 4QAZ A; 645-734;
#=GS NCAP_EBOZM/19-734        DR PDB; 5T3T A; 113-125;
#=GS NCAP_EBOZM/19-734        DR PDB; 4YPI A; 39-384;
#=GS NCAP_EBOZM/19-734        DR PDB; 5Z9W A; 19-406;
#=GS NCAP_EBOZM/19-734        DR PDB; 6C54 B; 39-411;
#=GS NCAP_EBOZM/19-734        DR PDB; 4ZTG A; 36-354;
#=GS NCAP_EBOZM/19-734        DR PDB; 4YPI B; 39-385;
#=GS NCAP_EBOZM/19-734        DR PDB; 6NUT A; 20-406;
#=GS NCAP_EBOZM/19-734        DR PDB; 4QB0 A; 645-734;
#=GS NCAP_EBOZM/19-734        DR PDB; 4ZTA A; 37-361;
#=GS M4J9H3_9MONO/19-734      AC M4J9H3.1
#=GS G8EFI1_LLOVA/19-746      AC G8EFI1.1
#=GS K4MSQ7_9MONO/1-691       AC K4MSQ7.1
B8XCM7_9MONO/19-734                 ............................................a-DYHKILTAGLSVQQGIVRQRIIPVYQISNLEEVCQLIIQAFEAGVDFQDSADSFLLMLCLHHAYQGDYKQFLESNAVKYLEGHGFRF.EMKKKEGVKRLEELLPAASSGKNIKRTLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTSWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVIANSVAQARFSGLLIVKTVLDHILQKT.EHGV.RLHPLARTAKVKNEVSSFKAALASLAQHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQLQKYAESR..ELDHLGLDDQEKKILKDFHQKKNEISFQQTTAMVTLRKERLAKLTEAIT.........STSILKTGRRYDDDNDIPFPGPINDNENSGQNDDD....PTDSQDTTIPDVIIDPNDGGYNNYSDYANDAASAPDDLVLFDLeDEDD.ADnpAQNTPEKNDRPATT-KLRNGQDQDGNQ.GETA.SPRVAPN...QYR--..D.....KP.MPQ.VQDR.S....ENHDQT.L..QTQSRV..LTPISEEADPSDHNDGDNE.SIPPLESDDEGS.........TDTTAAETKP..ATAPPAPVYRSISVDDSV......PSEN.....IPAQS....NQTNNEDNVRNNA.QSEQSIAEMYQHILKTQGPFDAILYYHMMKEE......PIIFSTSDGKEYTYPDSLEDEYPPWLSEKEAMNEDNRFITMDGQQFYWPVMNHRNKFMAI..........
#=GR B8XCM7_9MONO/19-734      SS    ............................................X-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXX-XXXXXXXXXXXX.XXXX.XXXXXXX...XXX--..X.....XX.XXX.XXXX.X....XXXXXX.X..XXXXXX..XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXX.........XXXXXXXXXX..XXXXXXXXXXXXXXXXXX......XXXX.....XXXXX....XXXXXXXXXXXHH.CCHHHHHHHHHHHHHHC-HHHHHHHHHHHH-S......-EEEE-TTS-EEEETGGGSSSS-TTS-TTGGGSGGGGEEECTTCEEEGGG--HHHHHHHH..........
A0A2P1GML8_9MONO/9-471              fsdiastpsdsyvsrsklrvyaskapdllygllvaalldpelprs--------------------------------------------------TAASVFVSLFIGHFYRGDITSFSTSSIAKELTKFGHNLiYVEVDIDVASRTIISPKASRLSQYIKKAELLTD-----RTLERFITYLAAMMPKLMISIDAVHAKVVKTDAVLKSQGIPSLGDVLIHKATVTTVRAHLMDSFPGKYLLIKLTISQVSSGSVCGGQIKTLIDQARMAGLVLIKLFTDHLISGSgGKGNkSWHPILSLKDLEREAGDMVAAINGISAHGDLAPFARILGLSGVEKVEYGKFPKLAAVIVGIGQAHNSSLNLMVVGAAHKPLCEAARLFEESRKKDGEAKlgGMFPTQVTQAEKRRLADFHKDMTKATEESLKAAKAAQMRTLQAIRASVGgp.....gsAVGQPKMVTFEDERDEEHHVGNLTVRRRHREYDSDdysySIDQAEYGFDPPEEDLDDEVDDE--------------------.----.--..---------------------------.----.-------...-----..-.....--.---.----.-....------.-..------..-------------------.------------.........----------..------------------......----.....-----....-------------.--------------------------------......------------------------------------------------------------deedeevgpp
A0A068J945_9MONO/19-734             .............................................MDYHKILTAGLSVQQGIVRQRVIPVYQVNNLEEICQLIIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKYLEGHGFRF.EVKKCDGVKRLEELLPAVSSGRNIKRTLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVISNSVAQARFSGLLIVKTVLDHILQKT.ERGV.RLHPLARTAKVKNEVNSFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQLQQYAESR..ELDHLGLDDQEKKILMNFHQKKNEISFQQTNAMVTLRKERLAKLTEAIT.........AASLPKTSGHYDDDDDIPFPGPINDDDNPGHQDDD....PTDSQDTTIPDVVVDPDDGGYGEYQSYSENGMSAPDDLVLFDL.DEDD.ED..TKPVPNRSTKGGQQKNSQKGQHTEGRQ.TQST.PTQNVTG...PRRTI..H.....HA.SAP.LTDN.D....RRNEPS.G..STSPRM..LTPINEEADPLDDADDETS.SLPPLESDDEEQ.........DRDGTSNRTP..TVAPPAPVYRDHSEKKEL......PQDE.....QQDQD....HIQEARNQDSDNT.QPEHSFEEMYRHILRSQGPFDAVLYYHMMKDE......PVVFSTSDGKEYTYPDSLEEEYPPWLTEKEAMNDENRFVTLDGQQFYWPVMNHRNKFMAI..........
A0A091CLL8_FUKDA/1-109              ..........................................mlc----------------------------------------------------------------------------------------.----------------------------------------------------------------------------------------------------------------------------------------------NVLTYIVVNS.NSGT.QIHPTAQGSAIQGEPTQPEHRCRSLQKHVVYASL----YVSLGYQLEHG---QL--LPWGVSSVYPSTLVGANTDACSLALREAANSAELKLQEL----..-------------------------------------------------.........-----------------------------------....-------------------------------------------.----.--..---------------------------.----.-------...-----..-.....--.---.----.-....------.-..------..-------------------.------------.........----------..------------------......----.....-----....-------------.--------------------------------......------------------------------------------------------------kfkkye....
NCAP_MABVM/1-691                    .............................................MDLHSLLELGTKPTAPHVRNKKVILFDTNHQVSICNQIIDAINSGIDLGDLLEGGLLTLCVEHYYNSDKDKFNTSPVAKYLRDAGYEF.DVIKNADATRFLDVSPNEPHYSPLILALKTLESTESQRGRIGLFLSFCSLFLPKLVVGDRASIEKALRQVTVHQEQGIVTYPNHWLTTGHMKVIFGILRSSFILKFVLIHQGVNLVTGHDAYDSIISNSVGQTRFSGLLIVKTVLEFILQKT.DSGV.TLHPLVRTSKVKNEVASFKQALSNLARHGEYAPFARVLNLSGINNLEHGLYPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAAHDAEVKLQRRHEHQ..EIQAIAEDDEERKILEQFHLQKTEITHSQTLAVLSQKREKLARLAAEIEnnivedqgfKQSQNRVSQSFLND---PTPVEVTVQARPM-----....---NRPTALPPPVDDKIEHESTEDSSSSSSFVDLNDPFALLNE.DEDTlDD..SVMIPG---------------------.TTSR.EFQGIPE...PPR--..-.....-Q.SQD.LNNS.Q....GKQE--.-..------..----DESTNRIKKQFLRYQ.ELPPVQEDDESEyttdsqesiDQPGSDNEQG..VDLPPPPLYAQEKRQDPIqhpaanPQDPfgsigDVNGD....ILEPIRSPSSPSApQEDTRMREAYE------------LSPDFTNDEdnqqnwPQRVVTKKGRTFLYPNDLLQTNPPESLITALVEEYQNPVSAKELQADWPDMSFDER-RHV..........
#=GR NCAP_MABVM/1-691         SS    .............................................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXX-----....---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXX..XXXXXX---------------------.XXXX.XXXXXXX...XXX--..-.....-X.XXX.XXXX.X....XXXX--.-..------..----XXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX..XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXSSEEEE-TTS-EEEETGGGSSSS--HHHHHHHHHTSS-HHHHHHHHHHGGGS-HHHH-HHH..........
L7REU1_9MONO/19-734                 .............................................LDYHKILTAGLTVQQGIVRQKIISVYLVDNLEAMCQLVIQAFEAGIDFQENADSFLLMLCLHHAYQGDYKLFLESNAVQYLEGHGFKF.ELRKRDGVNRLEELLPAATSGKNIRRTLAALPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKYLLIHQGMHMVAGHDANDAVIANSVAQARFSGLLIVKTVLDHILQKT.DQGV.RLHPLARTAKVRNEVNAFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLYPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQLQQYAESR..ELDSLGLDDQERRILMNFHQKKNEISFQQTNAMVTLRKERLAKLTEAIT.........LASRPNLGSRQDDDNEIPFPGPISNNPDQDHLEDD....PIDSRDTIIPNSAIDPEDGDFENYNGYHDDEVGTAGDLVLFDL.DDHE.DD..NKAFEPQDSS------PQSQRGIERER.LIHP.PLGNNKD...DNRASdnN.....QQ.SAD.SEEQ.EdrynRHRGPE.R..TTANRR..LSPVYEEDTLIDQGDDDPS.GPPPLESDDDDA.........SSSQQDPDYT..AVAPPAPVYRSAEAHEPP......HKSS.....NEPAE....TSQLNEDPDIGQS.KSMQKLEETYHHLLRTQGPFEAINYYHMMKDE......PVIFSTDDGKEYTYPDSLEEAYPPWLTEKERLDNENRYIYINNQQFFWPVMSPRDKFLAI..........
A0A343EQE8_9MONO/19-734             .............................................VDYHSILTAGLSMPQSIVRQRVIPVFQISNLEDICQMIIQAFEAGVDFQDSADSFLLMLCLHHAYQGDYKLFLESGAVKYLEGHGFRF.EPRKKDGVKRLEELLPAVTNGKNIRRTLAAMPEGETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTSWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMIAGHDANDAVIANSVAQARFSGLLIVKTVLDHILQKT.DRGV.RLHPLARTAKVRNEVHSFKAALNSLAQHGEYAPFARLLNLSGVNNLEHGLYPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQLQQYAETR..ELDHLGLDTKEKEILMNFHQRKNEISFQQTNAMVSLRKERLAKLTEAIA.........AASAQRERGYYDDDNEIPFPGPINDNDDQDQHVDD....PTDTQDTTIPDIVVDPDDGGYRGYQIRQDDDMDAPDDLVLFDL.DDNE.QG..PPSENARPGFTVERGPRSSGQQKSTEQ.HQPP.PSSDLQA...PTYNH..H.....SR.EHH.ADQG.T....RSHELR.S..VQESDL..LASIPEEHHPADHTDDKASlSLPPDSESDG-E.........SSPDTDEADR..TTAPPAPVYKNHKDAGPA......TVGE....tNEETD....FDDNI-NNQSESP.LNDHGIERMYRHILETQGPFDAILYYHMMKDE......PVTFSTSDGKEYIYPDSLENEYPPWLSEKEATQSESRFINIDGQQFYWPVMNYRDKFMAI..........
NCAP_EBOSU/19-734                   .............................................LDYHKILTAGLSVQQGIVRQRVIPVYVVSDLEGICQHIIQAFEAGVDFQDNADSFLLLLCLHHAYQGDHRLFLKSDAVQYLEGHGFRF.EVREKENVHRLDELLPNVTGGKNLRRTLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTSWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDTVISNSVAQARFSGLLIVKTVLDHILQKT.DLGV.RLHPLARTAKVKNEVSSFKAALGSLAKHGEYAPFARLLNLSGVNNLEHGLYPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQLQQYAETR..ELDNLGLDEQEKKILMSFHQKKNEISFQQTNAMVTLRKERLAKLTEAIT.........TASKIKVGDRYPDDNDIPFPGPIYDETHPNPSDDN....PDDSRDTTIPGGVVDPYDDESNNYPDYEDSAEGTTGDLDLFNL.DDDD.DD..SQPGPP---DRGQSKERAARTHGLQD-.PTLD.GAKKVPE...LTPGS..HqpgnlHI.TKP.GSNT.-....--NQPQ.GnmSSTLQS..MTPIQEESEPDDQKDDDDE.SLTSLDSEGDED.........VESVSGENNP..TVAPPAPVYKDTGVDTNQ......QNGP.....SNAVD....-GQGSESEALPINpEKGSALEETYYHLLKTQGPFEAINYYHLMSDE......PIAFSTESGKEYIFPDSLEEAYPPWLSEKEALEKENRYLVIDGQQFLWPVMSLQDKFLAV..........
NCAP_MABVA/1-691                    .............................................MDLHSLLELGTKPTAPHVRNKKVILFDTNHQVSICNQIIDAINSGIDLGDLLEGGLLTLCVEHYYNSDKDKFNTSPIAKYLRDAGYEF.DVIKNADATRFLDVIPNEPHYSPLILALKTLESTESQRGRIGLFLSFCSLFLPKLVVGDRASIEKALRQVTVHQEQGIVTYPNHWLTTGHMKVIFGILRSSFILKFVLIHQGVNLVTGHDAYDSIISNSVGQTRFSGLLIVKTVLEFILQKT.DSGV.TLHPLVRTSKVKNEVASFKQALSNLARHGEYAPFARVLNLSGINNLEHGLYPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAAHDAEVKLQRRHEHQ..EIQAIAEDDEERKILEQFHLQKTEITHSQTLAVLSQKREKLARLAAEIEnnivedqgfKQSQNRVSQSFLND---PTPVEVTVQARPI-----....---NRPTALPPPVDSKIEHESTEDSSSSSSFVDLNDPFALLNE.DEDTlDD..SVMIPS---------------------.TTSR.EFQGIPE...PPR--..-.....-Q.SQD.IDNS.Q....GKQE--.-..------..----DESTNLIKKPFLRYQ.ELPPVQEDDESEyttdsqesiDQPGSDNEQG..VDLPPPPLYAQEKRQDPIqhpavsSQDPfgsigDVNGD....ILEPIRSPSSPSApQEDTRAREAYE------------LSPDFTNYEdnqqnwPQRVVTKKGRTFLYPNDLLQTNPPESLITALVEEYQNPVSAKELQADWPDMSFDER-RHV..........
NCAP_EBOZM/19-734                   .............................................MDYHKILTAGLSVQQGIVRQRVIPVYQVNNLEEICQLIIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKYLEGHGFRF.EVKKRDGVKRLEELLPAVSSGKNIKRTLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVISNSVAQARFSGLLIVKTVLDHILQKT.ERGV.RLHPLARTAKVKNEVNSFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQLQQYAESR..ELDHLGLDDQEKKILMNFHQKKNEISFQQTNAMVTLRKERLAKLTEAIT.........AASLPKTSGHYDDDDDIPFPGPINDDDNPGHQDDD....PTDSQDTTIPDVVVDPDDGSYGEYQSYSENGMNAPDDLVLFDL.DEDD.ED..TKPVPNRSTKGGQQKNSQKGQHIEGRQ.TQSR.PIQNVPG...PHRTI..H.....HA.SAP.LTDN.D....RRNEPS.G..STSPRM..LTPINEEADPLDDADDETS.SLPPLESDDEEQ.........DRDGTSNRTP..TVAPPAPVYRDHSEKKEL......PQDE.....QQDQD....HTQEARNQDSDNT.QSEHSFEEMYRHILRSQGPFDAVLYYHMMKDE......PVVFSTSDGKEYTYPDSLEEEYPPWLTEKEAMNEENRFVTLDGQQFYWPVMNHKNKFMAI..........
#=GR NCAP_EBOZM/19-734        SS    .............................................XXSTHHHHTTTSXXXXXXS-EEEEEEE-S-HHHHHHHHHHHHHHT---SSGHHHHHHHHHHHHHSTT-HHHHHHSHHHHHHHCTTEEE.EEEE-TSTSSGGGCSSSCTTHHHHHHHHHHS-SS---S--HHHHHHHHHTTTTTTTT-HHHHHHHHHHHHHHHHHTTS----TTTCSHHHHHHHHHHHHH-HHHHHHHHHHHHTS-SSSSHHHHHHHHHHHHTTTTTTHHHHHHHHHHEEEE.TTEE.EE-GGGGSGGGHHHHHHHHHHHHHHHGGGGGGGGHHHHT-TTGGGG-GGGSHHHHHHHHHHHHHTTTTGTT--CHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXX.XX..XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXX.XXXXXXX...XXXXX..X.....XX.XXX.XXXX.X....XXXXXX.X..XXXXXX..XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXX.........XXXXXXXXXX..XXXXXXXXXSXXXXXXXX......XXXX.....XXXXX....XXXXXXXXXXXXX.XXXHHHHHHHHHHHHHCXHHHHHHHHHHHHXS......XEEEEXTTSXEEEETGGGSSSSXTTSXCCHHHSGGGGEEEETTEEEEGGGXXHHHHHHHH..........
M4J9H3_9MONO/19-734                 .............................................LDYHKILTAGLSVQQGIVRQRVIPVYVVNDLEGICQHIIQAFEAGVDFQDNADSFLLLLCLHHAYQGDHRLFLKSDAVQYLEGHGFRF.EVREKENVHRLDELLPNVTGGKNLRRTLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTSWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDTVISNSVAQARFSGLLIVKTVLDHILQKT.DLGV.RLHPLARTAKVKNEVSSFKAALGSLAKHGEYAPFARLLNLSGVNNLEHGLYPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQLQQYAETR..ELDNLGLDEQEKKILMSFHQKKNEISFQQTNAMVTLRKERLAKLTEAIT.........TASKIKVGDRYPDDNDIPFPGPIYDDTHPNPSDDN....PDDSRDTTIPGGVVDPYDDESNNYPDYEDSAEGTTGDLDLFNL.DDDD.DD..SRPGPP---DRGQNKE--RAARTYGLQdPTLD.GAKKVPE...LTPGS..H.....QPgNLQ.ITKSgS....NTNQPQ.G..NMSSTLhsMTPIQEESEPDDQKDNDDE.SLTSLDSEGDED.........GESISEENTP..TVAPPAPVYKDTGVDTNQ......QNGP.....SSTVD....SQGSESEALPINS.KKSSALEETYYHLLKTQGPFEAINYYYLMSDE......PIAFSTESGKEYIFPDSLEEAYPPWLSEKEALEKENRYLVIDGQQFLWPVMSLQDKFLAV..........
G8EFI1_LLOVA/19-746                 ............................................s-ELHGILSLGLNVDHTIVRKKSIPLFEIGNSDQVCNWIIQIIEAGVDLQDVADSFLTMLCVNHAYQGDPNLFLESPAAHYLKGHGIHF.EIQHRDNVDHITDLLGVGSRDKSLRKTLSALEFEPDGSTTAGMFLSFASLFLPKLVVGERACLEKVQRQIQIHAEQGLIQYPTQWQSVGHMMVVFRLIRVNFVLKFLLVHQGMHMMAGHDANDAIIANSISQTRFSGLLIVKTVLEHILQKT.EAGV.QLHPLARTSKVKGELLAFKSALEALASHREYAPFARLLNLSGVNNLEHGLYPQLSAIALGVATAHGSTLAGVNVSEQYQQLREAATEAEKQLQQHSEMR..ELETLGLDEQERKILATFHSRKNEINIQQTSSILAIRKERLRKLTEALNee.....knKNALDD-EDESEEDDWSPENRGIRSNKGSTKESSS....YTASRTEEDRNNYNSKDDHLSGKEQMSTQQE-SGADDLDLFDL.DDDG.DT..NSQDPN---NRQKQSDTQQTQESSDRS.DYSRrPAYDWPPgdrPHTTQ..A....tDE.HTDlLNKD.H....RRNQVKpGrrGNDPRT..LPLISFDDNEG-EILDDKS.DLPAPDTH-SDP.........DTEESEEEHPdeELLPPAPKYNTKTSEQE-......PGDW.....KQPTSplstIPEEEGGHEANNDnSESDLIDQMYQHIFETEGAYAAINYYYKTTGR......PVTFTSNNNHDYTFPQDIEGLFPPWEGKENQKVAEILTNSLHETGQEWADMSAKERY---lfl.......
K4MSQ7_9MONO/1-691                  .............................................MDLHSLLELGTKPTAPHVRNKKVILFDTNHQVSICNQIIDAINSGIDLGDLLEGGLLTLCVEHYYNSDKDKFNTSPIAKYLRDAGYEF.DVIKNADATRFLDVIPNEPHYSPLILALKTLESTESQRGRIGLFLSFCSLFLPKLVVGDRASIEKALRQVTVHQEQGIVTYPNHWLTTGHMKVIFGILRSSFILKFVLIHQGVNLVTGHDAYDSIISNSVGQTRFSGLLIVKTVLEFILQKT.DSGV.TLHPLVRTSKVKNEVASFKQALSNLARHGEYAPFARVLNLSGINNLEHGLYPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAAHDAEVKLQRRHEHQ..EIQAIAEDDEERKILEQFHLQKTEITHSQTLAVLSQKREKLARLAAEIEnnivedqgfKQSQNRVSQSFLND---PTPVEVTVQARPV-----....---NRPTALPPPVDDKIEHESTGDSSSSSSFVDLNDPFALLNE.DEDTlDD..SVMIPS---------------------.TTSR.EFQGIPE...SPG--..-.....-Q.SQD.LDNS.Q....GKQE--.-..------..----DESTNPIKKQFLRYQ.ELPPVQEDDESEyttdsqesiDQPGSDNEQG..VDLPPPPLYTQEKRQDPIqhpaasSQDPfgsigDVNGD....ILEPIRSPSSPSApQEDTRAREAYE------------LSPDFTNYEdnqqnwPQRVVTKKGRTFLYPNDLLQTSPPESLVTALVEEYQNPVSAKELQADWPDMSFDER-RHV..........
#=GC SS_cons                        .............................................XXSTHHHHTTTSXXXXXXS-EEEEEEE-S-HHHHHHHHHHHHHHT---SSGHHHHHHHHHHHHHSTT-HHHHHHSHHHHHHHCTTEEE.EEEE-TSTSSGGGCSSSCTTHHHHHHHHHHS-SS---S--HHHHHHHHHTTTTTTTT-HHHHHHHHHHHHHHHHHTTS----TTTCSHHHHHHHHHHHHH-HHHHHHHHHHHHTS-SSSSHHHHHHHHHHHHTTTTTTHHHHHHHHHHEEEE.TTEE.EE-GGGGSGGGHHHHHHHHHHHHHHHGGGGGGGGHHHHT-TTGGGG-GGGSHHHHHHHHHHHHHTTTTGTT--CHHHHHHHHHHHHHHHHHHHHHHHHH..HHHHSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXX.XX..XXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXX.XXXXXXX...XXXXX..X.....XX.XXX.XXXX.X....XXXXXX.X..XXXXXX..XXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXX.........XXXXXXXXXX..XXXXXXXXXSXXXXXXXX......XXXX.....XXXXX....XXXXXXXXXXXHH.CCHHHHHHHHHHHHHHCXHHHHHHHHHHHHXS.....SSEEEEXTTSXEEEETGGGSSSSXTTSHCCHHHSGGGGEEECTTCEEEGGGSXHHHHHHHH..........
#=GC seq_cons                       .............................................hDhHpILohGLssppsIVRp+hIslaplss.-pICphIIQAhEAGlDhQDsADSFLLhLClcHAYQGDhchFLcSsAsKYLcGHGa+F.EVcKc-sVpRlp-LLPssops+sl++TLuAhs-pEoscusAGpFLSFASLFLPKLVVGE+ACLEKVQRQIQVHAEQGLIQYPTsWQSVGHMMVIFRLhRoNFllKFLLIHQGMHMVAGHDANDulIuNSVuQARFSGLLIVKTVLDHILQKT.-pGV.pLHPLARTuKVKNEVsSFKAALuSLA+HGEYAPFARLLNLSGVNNLEHGLYPQLSAIALGVATAHGSTLAGVNVGEQYQQLREAATEAEKQLQpauEsR..EL-sLGLD-pE+KILhsFHp+KNEIoaQQTsAhlolRKERLAKLTEAIs.........tsSts+suspas-Ds-.PaPGsIsspscss..sss....s.Dop-TslPssVsD..Dtt.sp.ps.pssthsssDDLsLFsL.D-Ds.-D..s..hPs............tttt..t...spsp.shpslPt...s.t....t.....pt.sts.lsps.p....tppp.p......t.p...hs.lsE-ss.hcct.sc.p.sLPPlpp-D-pp.........spssosppps..sshPPAPlYpspptpps.......sps......p.ssD....h.p..cs.sssss.ppppthcEhYpHlhcopGsatAl.YYahhp-E......PlhFoTpcG+-YhYPssLEptaPPW.sccpthpc-pphlshctpQh.WPsMshc-+ahtl..........
//
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