GenomeNet

Database: Pfam
Entry: FrpC
LinkDB: FrpC
Original site: FrpC 
#=GF ID   FrpC
#=GF AC   PF06901.16
#=GF DE   RTX iron-regulated protein FrpC
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_14005 (release 10.0)
#=GF GA   25.00 25.00;
#=GF TC   26.40 26.10;
#=GF NC   23.70 21.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   12654851
#=GF RT   Neisseria meningitidis RTX proteins are not required for
#=GF RT   virulence in infant rats. 
#=GF RA   Forman S, Linhartova I, Osicka R, Nassif X, Sebo P, Pelicic V; 
#=GF RL   Infect Immun 2003;71:2253-2257.
#=GF DR   INTERPRO; IPR010692;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of several RTX iron-regulated FrpC proteins
#=GF CC   which appear to be found exclusively in Neisseria meningitidis.
#=GF CC   FrpC has been shown to be related to the RTX family of bacterial
#=GF CC   cytotoxins. FrpC is found in the meningococcal outer membrane.
#=GF CC   The function of this family is unknown although it is thought to
#=GF CC   be a virulence factor [1].
#=GF SQ   5
#=GS A0A3S9MYT8_9FLAO/2-150  AC A0A3S9MYT8.1
#=GS Q9K129_NEIMB/1-257      AC Q9K129.1
#=GS Q9JYV6_NEIMB/1-257      AC Q9JYV6.1
#=GS Q9JYV7_NEIMB/1-269      AC Q9JYV7.1
#=GS Q9K0L0_NEIMB/1-271      AC Q9K0L0.1
A0A3S9MYT8_9FLAO/2-150             kkvg----------LFILFVSSVLI-ISCDDKNkrDKADQEFIEVQDVENSTKKENKERYEEKIGRLEDQLQGTWTRIDYPYSTFIFKENSAKLISEGLAEEpEFKTYTLSYSCNGKTNAQGYSYLWYEDTQYCETIKVQNDTL--------------------------------------------------------------------------------------------------------------------------------------iqsnpdfdylikyiqk
Q9K129_NEIMB/1-257                 ....MRPYATTIYQLFILFIGSVFTMTSCEPVN..--------------EQTSFNNPEPMTGFEHTVTFDFQGTKMVIPYGYLARYTQNNATKWLSDTPGQD.AYSINLIEISVYYKKTDQGWVLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERLLTYGVKKMPSAYPEYEAYEDKRHIPENPYFHEFYYIKKGENPAIITHRNNRINQTEEDSYSTSVGSCINGFTVRYYPFIREKQQLTQQELVGYHQQVEQLVQSFVNNSSKK................
Q9JYV6_NEIMB/1-257                 ....MRPYATTIYQLFILFIGSVFTMTSCEPVN..--------------EQTSFNNPEPMTGFEHTVTFDFQGTKMVIPYGYLARYTQDNATKWLSDTPGQD.AYSINLIEISVYYKKTDQGWVLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERLLTYGVKKMPSAYPEYEAYEDKRHIPENPYFHEFYYIKKGENPAIITHWNNRVNQAEEDNYSTSVGSCINGFTVQYYPFIREKQQLTQQELVGYHQQVEQLVQSFVNNSSKK................
Q9JYV7_NEIMB/1-269                 ....MRPYATTIYQLFILFIGSVFTMTSCEPVN..EKTDQKAVSAQQAKEQTSFNNPEPMTGFEHTVTFDFQGTKMVIPYGYLARYTQDNATKWLSDTPGQD.AYSINLIEISVYYKKTDQGWVLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERLLTYGVKKMPSAYPEYEAYEDKRHIPENPYFHEFYYIKKGENPAIITHRN--YHRYGENDYSTSVGSCINGFTVRYYPFIREKQQLTQQELVGYHQQVEQLVQSFVNNPSKK................
Q9K0L0_NEIMB/1-271                 ....MRPYATTIYQLFILFIGSVFTMTSCEPVN..EKTDQKAVSAQQAKEQTSFNNPEPMTGFEHTVTFDFQGTKMVIPYGYLARYTQDNATKWLSDTPGQD.AYSINLIEISVYYKKTDQGWVLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERLLTYGVKKMPSAYPEYEAYEDKRHIPENPYFHEFYYIKKGENPAIITHWNNRVNQAEEDNYSTSVGSCINGFTVQYYPFIREKQQLTQQELVGYHQQVEQLVQSFVNNSSKK................
#=GC seq_cons                      ....MRPYATTIYQLFILFIGSVFTMTSCEPVN..-KsDQchlpsQpscEQTSFNNPEPMTGFEHTVTFDFQGTKMVIPYGYLARYTQDNATKWLSDTPGQD.AYSINLIEISVYYKKTDQGWVLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERLLTYGVKKMPSAYPEYEAYEDKRHIPENPYFHEFYYIKKGENPAIITHhNNRlNQsEEDsYSTSVGSCINGFTVpYYPFIREKQQLTQQELVGYHQQVEQLVQSFVNNSSKK................
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