GenomeNet

Database: Pfam
Entry: HTH_17
LinkDB: HTH_17
Original site: HTH_17 
#=GF ID   HTH_17
#=GF AC   PF12728.7
#=GF DE   Helix-turn-helix domain
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Jackhmmer:Q18A58_CLOD6
#=GF GA   27.00 27.00;
#=GF TC   27.00 27.00;
#=GF NC   26.90 26.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 45638612 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Helix-turn-helix
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is a DNA-binding helix-turn-helix domain.
#=GF SQ   19684
#=GS A0A1H4X602_9ACTN/6-58      AC A0A1H4X602.1
#=GS X7E8J9_9GAMM/5-55          AC X7E8J9.1
#=GS A0A101JGC5_9ACTN/5-55      AC A0A101JGC5.1
#=GS A0A1I7FZZ8_9FLAO/34-79     AC A0A1I7FZZ8.1
#=GS A0A1H8YGA9_9PSEU/13-64     AC A0A1H8YGA9.1
#=GS A0A1I7MST6_9MICC/17-67     AC A0A1I7MST6.1
#=GS A0A1X2LRF8_9MYCO/8-57      AC A0A1X2LRF8.1
#=GS A0A0L0BGT7_9MICC/10-59     AC A0A0L0BGT7.1
#=GS R5FYX5_9PORP/64-114        AC R5FYX5.1
#=GS A0A1R3VZB0_9MICO/3-43      AC A0A1R3VZB0.1
#=GS A0A0F0KIL2_9MICO/9-58      AC A0A0F0KIL2.1
#=GS A0A257I209_9BACT/48-97     AC A0A257I209.1
#=GS A0A090VMA6_9FLAO/38-88     AC A0A090VMA6.1
#=GS A0A1G8UEX2_9RHOB/6-55      AC A0A1G8UEX2.1
#=GS F0FA32_9BACT/38-88         AC F0FA32.1
#=GS R9LVA1_9FIRM/4-46          AC R9LVA1.1
#=GS A0A0P0EKE2_9MICO/17-68     AC A0A0P0EKE2.1
#=GS F6FTF7_ISOV2/10-61         AC F6FTF7.1
#=GS A0A0N1NIG7_9ACTN/23-74     AC A0A0N1NIG7.1
#=GS U2IPP3_9PORP/50-100        AC U2IPP3.1
#=GS X7YYF8_MYCKA/10-61         AC X7YYF8.1
#=GS A0A1F9ZX46_9BACT/1-50      AC A0A1F9ZX46.1
#=GS A0A239QVW9_9MICO/31-82     AC A0A239QVW9.1
#=GS A0A1H4LIS1_9ACTN/19-69     AC A0A1H4LIS1.1
#=GS A0A1B6Y9C6_9BACT/39-89     AC A0A1B6Y9C6.1
#=GS A0A1J4UCE3_9BACT/9-57      AC A0A1J4UCE3.1
#=GS R7FGY3_9FIRM/39-94         AC R7FGY3.1
#=GS A0A0F6W760_9DELT/21-71     AC A0A0F6W760.1
#=GS A0A191UWP3_9ACTN/8-61      AC A0A191UWP3.1
#=GS G8X4E1_FLACA/35-85         AC G8X4E1.1
#=GS A0A1M6H1J2_9FLAO/69-116    AC A0A1M6H1J2.1
#=GS W2CJB2_9BACT/38-87         AC W2CJB2.1
#=GS A0A1E4D6R9_9MICO/9-57      AC A0A1E4D6R9.1
#=GS A0A0M8TDS3_9ACTN/8-58      AC A0A0M8TDS3.1
#=GS A0A0F4IK00_9ACTN/3-50      AC A0A0F4IK00.1
#=GS B4V7K7_9ACTN/3-54          AC B4V7K7.1
#=GS A0A1E3S0P1_9MYCO/5-55      AC A0A1E3S0P1.1
#=GS A0A286REJ1_9PLAN/7-58      AC A0A286REJ1.1
#=GS K0KAE2_SACES/28-79         AC K0KAE2.1
#=GS A0A2A9EN58_9MICO/11-61     AC A0A2A9EN58.1
#=GS A0A0N0AQ85_9ACTN/11-61     AC A0A0N0AQ85.1
#=GS A0A136ML56_9BACT/60-111    AC A0A136ML56.1
#=GS A0A1F8BIW2_9BACT/6-49      AC A0A1F8BIW2.1
#=GS A0A1T1BE19_9DEIO/11-61     AC A0A1T1BE19.1
#=GS I6XX87_PSEPQ/3-53          AC I6XX87.1
#=GS A8USZ9_9AQUI/3-52          AC A8USZ9.1
#=GS A0A264YC34_9BACT/85-134    AC A0A264YC34.1
#=GS A0A1H9D3E7_9BACT/49-98     AC A0A1H9D3E7.1
#=GS A0A1D3DRQ8_9ACTN/22-71     AC A0A1D3DRQ8.1
#=GS D4IQK3_9BACT/45-95         AC D4IQK3.1
#=GS A0A2G2D478_9SPHN/19-69     AC A0A2G2D478.1
#=GS A0A0G0J9M0_9BACT/5-53      AC A0A0G0J9M0.1
#=GS A0A1G9GCH2_9ACTN/8-58      AC A0A1G9GCH2.1
#=GS A0A1F6NK29_9BACT/8-56      AC A0A1F6NK29.1
#=GS A0A0H5CGC1_9PSEU/10-59     AC A0A0H5CGC1.1
#=GS A0A1E7JF62_9ACTN/24-74     AC A0A1E7JF62.1
#=GS E6MLF3_9BACT/46-96         AC E6MLF3.1
#=GS U5L9U5_9BACI/46-103        AC U5L9U5.1
#=GS A0A1E7KNV6_9ACTN/11-62     AC A0A1E7KNV6.1
#=GS A0A078KQ30_9FIRM/10-52     AC A0A078KQ30.1
#=GS R9KMX6_9FIRM/8-57          AC R9KMX6.1
#=GS A0A0C2LZQ6_9CYAN/125-174   AC A0A0C2LZQ6.1
#=GS R7H2V9_9BACT/40-90         AC R7H2V9.1
#=GS K1KHE7_9BURK/6-56          AC K1KHE7.1
#=GS W2CKY3_9BACT/3-45          AC W2CKY3.1
#=GS YZ38_AQUAE/250-301         AC O66426.1
#=GS D9R979_CLOSW/4-53          AC D9R979.1
#=GS S7XEZ3_9MICO/13-65         AC S7XEZ3.1
#=GS A0A1Y3ZW10_9BACE/42-94     AC A0A1Y3ZW10.1
#=GS A0A101N230_9ACTN/14-66     AC A0A101N230.1
#=GS A0A1B8SJI5_9MYCO/4-53      AC A0A1B8SJI5.1
#=GS A0A285EJV3_9ACTN/4-55      AC A0A285EJV3.1
#=GS M3V7D5_9ACTN/10-59         AC M3V7D5.1
#=GS B2GHM7_KOCRD/151-196       AC B2GHM7.1
#=GS R5E0S4_9FIRM/17-66         AC R5E0S4.1
#=GS X5E2S0_9BACT/44-93         AC X5E2S0.1
#=GS A0A157SRK4_9BORD/22-73     AC A0A157SRK4.1
#=GS A0A222X7Q6_9CELL/17-67     AC A0A222X7Q6.1
#=GS A0A286HLY2_9RHIZ/4-56      AC A0A286HLY2.1
#=GS A0A1K1R4D3_9PSEU/10-61     AC A0A1K1R4D3.1
#=GS A0A1S2R7L4_9BACI/6-56      AC A0A1S2R7L4.1
#=GS A1U8W6_MYCSK/4-54          AC A1U8W6.1
#=GS E6SDX3_INTC7/10-58         AC E6SDX3.1
#=GS A0A1I5S6X7_9ACTN/12-59     AC A0A1I5S6X7.1
#=GS A0A150UBZ9_9BRAD/3-52      AC A0A150UBZ9.1
#=GS A0A101B883_9MYCO/14-58     AC A0A101B883.1
#=GS A0A1L6L5X0_9DELT/17-68     AC A0A1L6L5X0.1
#=GS A0A1B2AG66_9SPHN/12-61     AC A0A1B2AG66.1
#=GS W4PUU9_9BACE/38-88         AC W4PUU9.1
#=GS A0A136JS69_9BACT/33-85     AC A0A136JS69.1
#=GS Q5P854_AROAE/28-79         AC Q5P854.1
#=GS A0A0M8MI47_9MICO/9-58      AC A0A0M8MI47.1
#=GS A0A1W9Z691_9MYCO/3-54      AC A0A1W9Z691.1
#=GS A0A1G1N609_9BACT/119-169   AC A0A1G1N609.1
#=GS D1VXC4_9BACT/50-100        AC D1VXC4.1
#=GS B5U591_9CAUD/6-59          AC B5U591.1
#=GS A0A0W7X9V0_9ACTN/9-61      AC A0A0W7X9V0.1
#=GS A0A180FUL7_9BACT/42-94     AC A0A180FUL7.1
#=GS A0A1I0X166_9RHIZ/12-60     AC A0A1I0X166.1
#=GS A0A1C3NAA3_9ACTN/5-56      AC A0A1C3NAA3.1
#=GS A0A077FN25_9RICK/13-65     AC A0A077FN25.1
#=GS A0A1G6P1Q1_9PSEU/8-58      AC A0A1G6P1Q1.1
#=GS U2TIU8_9ACTN/117-166       AC U2TIU8.1
#=GS A0A0S8II13_9BACT/1-49      AC A0A0S8II13.1
#=GS A0A1J5H2C9_9BACT/7-57      AC A0A1J5H2C9.1
#=GS R6XRJ1_9BACT/7-56          AC R6XRJ1.1
#=GS A0A062UK24_9RHOB/13-64     AC A0A062UK24.1
#=GS A0A238YD59_9FLAO/37-87     AC A0A238YD59.1
#=GS A0A0X3VBB6_9ACTN/11-62     AC A0A0X3VBB6.1
#=GS A0A1H8EPX4_9ACTN/4-54      AC A0A1H8EPX4.1
#=GS R5LDX0_9FIRM/7-57          AC R5LDX0.1
#=GS A0A1Q1PUQ6_9CAUD/4-59      AC A0A1Q1PUQ6.1
#=GS A0A1B3LMN1_9PROT/14-64     AC A0A1B3LMN1.1
#=GS A0A060RCK9_9BACT/57-107    AC A0A060RCK9.1
#=GS A0A1F5EVK4_9BACT/8-58      AC A0A1F5EVK4.1
#=GS A0A0M2RRI7_9ACTN/7-58      AC A0A0M2RRI7.1
#=GS A0A1G4WZ48_9MYCO/5-52      AC A0A1G4WZ48.1
#=GS Q3Z841_DEHM1/23-73         AC Q3Z841.1
#=GS A0A126UZQ5_9RHOB/15-67     AC A0A126UZQ5.1
#=GS A0A0P4R5T1_9ACTN/23-75     AC A0A0P4R5T1.1
#=GS H2C794_9CREN/4-55          AC H2C794.1
#=GS E6N659_9ARCH/10-59         AC E6N659.1
#=GS G1D338_9CAUD/15-61         AC G1D338.1
#=GS A0A1S1G6X3_9BACI/10-60     AC A0A1S1G6X3.1
#=GS D6GRQ3_FILAD/36-84         AC D6GRQ3.2
#=GS A0A1V4ADB2_9ACTN/22-75     AC A0A1V4ADB2.1
#=GS A0A0G1JSV1_9BACT/4-54      AC A0A0G1JSV1.1
#=GS A0A1H8FYR8_STIAU/18-64     AC A0A1H8FYR8.1
#=GS A0A222E2H6_9RHOB/7-56      AC A0A222E2H6.1
#=GS A0A1I1FJZ1_9FIRM/1-43      AC A0A1I1FJZ1.1
#=GS A0A1F3T571_9PROT/22-78     AC A0A1F3T571.1
#=GS A0A1H6L278_9MYCO/25-75     AC A0A1H6L278.1
#=GS A0A0N1NRU7_9ACTN/5-60      AC A0A0N1NRU7.1
#=GS A0A1G7QWK0_9FLAO/41-91     AC A0A1G7QWK0.1
#=GS A0A1H9VIS1_9PSEU/59-107    AC A0A1H9VIS1.1
#=GS A0A1N7NJL8_9RHOB/4-54      AC A0A1N7NJL8.1
#=GS A0A1Q7A1D8_9CHLR/8-57      AC A0A1Q7A1D8.1
#=GS A0A0A0BUN0_9CELL/10-61     AC A0A0A0BUN0.1
#=GS G8NUR1_GRAMM/11-63         AC G8NUR1.1
#=GS C7XW58_9LACO/4-54          AC C7XW58.1
#=GS S0GI53_9BACT/67-114        AC S0GI53.1
#=GS F7UYY0_EEGSY/24-74         AC F7UYY0.1
#=GS D7BM88_ARCHD/11-61         AC D7BM88.1
#=GS Q0A502_ALKEH/12-62         AC Q0A502.1
#=GS A0A1D3DT47_9ACTN/4-54      AC A0A1D3DT47.1
#=GS A0A0A7PCS9_9SPHN/5-54      AC A0A0A7PCS9.1
#=GS A0A2G0CHF9_9BACT/44-93     AC A0A2G0CHF9.1
#=GS A0A1J5AGN9_9CHLR/22-71     AC A0A1J5AGN9.1
#=GS A0A0F7N8P0_9ACTN/11-61     AC A0A0F7N8P0.1
#=GS A0A165EL06_9NEIS/12-64     AC A0A165EL06.1
#=GS A0A0U1KRD9_9FIRM/8-58      AC A0A0U1KRD9.1
#=GS A0A095C1Q7_9SPHN/84-133    AC A0A095C1Q7.1
#=GS A0A1W7CZ78_9ACTN/13-64     AC A0A1W7CZ78.1
#=GS A0A1Y4CB62_9FIRM/3-45      AC A0A1Y4CB62.1
#=GS A0A1C5IAT5_9ACTN/5-58      AC A0A1C5IAT5.1
#=GS F2I9V4_FLUTR/55-106        AC F2I9V4.1
#=GS A0A0D0JN98_9FLAO/69-116    AC A0A0D0JN98.1
#=GS A0A1C4U6L2_MICVI/11-62     AC A0A1C4U6L2.1
#=GS A0A2A6AY96_9ALTE/7-60      AC A0A2A6AY96.1
#=GS I3XBB1_RHIFR/9-58          AC I3XBB1.1
#=GS A0A0H2KM29_9MICO/4-54      AC A0A0H2KM29.1
#=GS A0A1P8WHB2_9PLAN/2-55      AC A0A1P8WHB2.1
#=GS A0A1G2CEA2_9BACT/5-53      AC A0A1G2CEA2.1
#=GS A0A075P2Y8_9ALTE/3-55      AC A0A075P2Y8.1
#=GS C2W3G2_BACCE/39-89         AC C2W3G2.1
#=GS A0A1Y4U0I9_9FIRM/1-42      AC A0A1Y4U0I9.1
#=GS A0A1H7D3K6_9FIRM/8-58      AC A0A1H7D3K6.1
#=GS A0A1Q2CQ94_9ACTN/73-123    AC A0A1Q2CQ94.1
#=GS A0A085ZU52_9FLAO/210-256   AC A0A085ZU52.1
#=GS E6K5C7_9BACT/22-73         AC E6K5C7.1
#=GS R9MNG4_9FIRM/4-45          AC R9MNG4.1
#=GS H6RRY8_BLASD/27-78         AC H6RRY8.1
#=GS A0A170ZN83_9ACTN/9-60      AC A0A170ZN83.1
#=GS A0A1H7JWG6_9ACTN/11-61     AC A0A1H7JWG6.1
#=GS A0A1H8IP44_9BACI/2-52      AC A0A1H8IP44.1
#=GS A0A1I2H4A0_9MICO/11-62     AC A0A1I2H4A0.1
#=GS A0A1F6WB89_9BACT/22-72     AC A0A1F6WB89.1
#=GS A0A1H5DAT7_9PSEU/10-60     AC A0A1H5DAT7.1
#=GS Q5SJ52_THET8/66-116        AC Q5SJ52.1
#=GS A0A178MBG3_9PROT/76-125    AC A0A178MBG3.1
#=GS A0A1I1VKJ0_9BACT/43-93     AC A0A1I1VKJ0.1
#=GS B2TKJ8_CLOBB/5-54          AC B2TKJ8.1
#=GS A4BC01_9GAMM/6-53          AC A4BC01.1
#=GS A0A257FZF7_9BURK/18-69     AC A0A257FZF7.1
#=GS A0A1G1LRJ7_9BACT/4-54      AC A0A1G1LRJ7.1
#=GS A0A1F6E6P6_9BACT/10-56     AC A0A1F6E6P6.1
#=GS E5X3A5_9BACE/53-101        AC E5X3A5.1
#=GS A0A1G9XM88_9ACTN/6-55      AC A0A1G9XM88.1
#=GS A8MD21_CALMQ/5-55          AC A8MD21.1
#=GS C9RBP4_AMMDK/9-58          AC C9RBP4.1
#=GS A0A1S2P571_9ACTN/13-63     AC A0A1S2P571.1
#=GS A0A1Q5MFE7_9ACTN/3-50      AC A0A1Q5MFE7.1
#=GS A0A1L6R6T0_9FLAO/27-70     AC A0A1L6R6T0.1
#=GS A0A1E5L2A3_9BACL/12-62     AC A0A1E5L2A3.1
#=GS A0A0Q0ZFB7_9SPHI/37-87     AC A0A0Q0ZFB7.1
#=GS R8VTU3_9CLOT/4-53          AC R8VTU3.1
#=GS A0A099D2X3_9ACTN/81-131    AC A0A099D2X3.1
#=GS B2JDW6_PARP8/9-58          AC B2JDW6.1
#=GS W9AI86_9MYCO/3-47          AC W9AI86.1
#=GS A0A1M7JED4_9BACT/58-106    AC A0A1M7JED4.1
#=GS A0A1W9ZVR5_9MYCO/31-81     AC A0A1W9ZVR5.1
#=GS Q5LA99_BACFN/41-91         AC Q5LA99.1
#=GS V6K9Q7_STRNV/11-61         AC V6K9Q7.1
#=GS A0A192IJG5_9RHIZ/8-57      AC A0A192IJG5.1
#=GS F6B6P0_DESCC/5-55          AC F6B6P0.1
#=GS A0A1H3M4I1_9PSEU/5-56      AC A0A1H3M4I1.1
#=GS C1ASE5_RHOOB/76-126        AC C1ASE5.1
#=GS A0A0W0GJE8_9CHLR/1-42      AC A0A0W0GJE8.1
#=GS A0A1Q9U2D4_9ACTN/11-60     AC A0A1Q9U2D4.1
#=GS A0A0D8HD52_9ACTN/72-122    AC A0A0D8HD52.1
#=GS A0A1R4L0S9_9SPHI/43-93     AC A0A1R4L0S9.1
#=GS A0A147EFK9_9SPHN/5-55      AC A0A147EFK9.1
#=GS D6THE5_9CHLR/134-185       AC D6THE5.1
#=GS A0A0Q7LL43_9BURK/25-76     AC A0A0Q7LL43.1
#=GS D4H3L5_DENA2/5-56          AC D4H3L5.1
#=GS A0A1S2L1A0_9BACI/3-45      AC A0A1S2L1A0.1
#=GS A0A221P427_9ACTN/5-60      AC A0A221P427.1
#=GS Q13JG2_PARXL/616-668       AC Q13JG2.1
#=GS A0A1G8GDT7_9FLAO/26-77     AC A0A1G8GDT7.1
#=GS A0A1Q5PBE0_9BACT/1-42      AC A0A1Q5PBE0.1
#=GS A0A0M5IUU4_SPHS1/12-63     AC A0A0M5IUU4.1
#=GS N0E2V5_9MICO/5-57          AC N0E2V5.1
#=GS A0A1M5ZXC3_9FLAO/36-86     AC A0A1M5ZXC3.1
#=GS A0A1I7B0S3_9ACTN/12-64     AC A0A1I7B0S3.1
#=GS A0A1V6MVG0_9ACTN/14-66     AC A0A1V6MVG0.1
#=GS D4XAE2_9BURK/17-69         AC D4XAE2.1
#=GS A0A1I0CGY7_9ACTN/7-60      AC A0A1I0CGY7.1
#=GS A0A1G8WF90_9BACI/19-58     AC A0A1G8WF90.1
#=GS A0A2A3I1Y3_9ACTN/14-69     AC A0A2A3I1Y3.1
#=GS A0A099D998_9ACTN/9-60      AC A0A099D998.1
#=GS F5XFN0_MICPN/4-53          AC F5XFN0.1
#=GS A0A1H2END3_9FLAO/37-87     AC A0A1H2END3.1
#=GS A0A1V4DX43_9ACTN/11-61     AC A0A1V4DX43.1
#=GS A0A142Y922_9PLAN/15-66     AC A0A142Y922.1
#=GS C7N1H7_SLAHD/7-56          AC C7N1H7.1
#=GS A0A1C3PH33_9ACTN/22-72     AC A0A1C3PH33.1
#=GS A0A126QLR7_9DELT/7-57      AC A0A126QLR7.1
#=GS A0A223V3D8_9FLAO/33-85     AC A0A223V3D8.1
#=GS A0A1D8ST60_9ACTN/6-58      AC A0A1D8ST60.1
#=GS A0A1G8WSC7_9ACTN/16-67     AC A0A1G8WSC7.1
#=GS A0A136N408_9BACT/69-119    AC A0A136N408.1
#=GS A0A0J6DMA2_9CELL/7-36      AC A0A0J6DMA2.1
#=GS A0A1C4ZR37_MICVI/56-107    AC A0A1C4ZR37.1
#=GS A0A1G7EZP7_9FLAO/44-94     AC A0A1G7EZP7.1
#=GS H6RTD1_BLASD/5-49          AC H6RTD1.1
#=GS A0A1G7ZHA5_9RHIZ/15-63     AC A0A1G7ZHA5.1
#=GS A0A1F5NW02_9BACT/57-107    AC A0A1F5NW02.1
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#=GS A0A1U7CNP6_9BACT/17-68     AC A0A1U7CNP6.1
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#=GS A0A0N7HY02_9FLAO/26-77     AC A0A0N7HY02.1
#=GS A0A0A7KB33_9FLAO/69-117    AC A0A0A7KB33.1
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#=GS A0A0Q1BMB0_9FLAO/5-54      AC A0A0Q1BMB0.1
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#=GS R6GCT6_9BACE/44-92         AC R6GCT6.1
#=GS E6SWU7_BACT6/62-112        AC E6SWU7.1
#=GS A0A1M5I9S1_9BACT/38-88     AC A0A1M5I9S1.1
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#=GS A0A1C3N803_9ACTN/11-62     AC A0A1C3N803.1
#=GS A0A1Y3ZUR1_9BACE/40-88     AC A0A1Y3ZUR1.1
#=GS S2KPH1_HALAF/1-44          AC S2KPH1.1
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#=GS A0A2D5ZEW2_9BACT/57-107    AC A0A2D5ZEW2.1
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#=GS A0A0Q4M025_9SPHN/81-130    AC A0A0Q4M025.1
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#=GS R6IG65_9FIRM/6-57          AC R6IG65.1
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