GenomeNet

Database: Pfam
Entry: HTH_20
LinkDB: HTH_20
Original site: HTH_20 
#=GF ID   HTH_20
#=GF AC   PF12840.7
#=GF DE   Helix-turn-helix domain
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Jackhmmer:Q182F8
#=GF GA   27.00 27.00;
#=GF TC   27.00 27.00;
#=GF NC   26.90 26.90;
#=GF BM   hmmbuild --amino HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 45638612 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Helix-turn-helix
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain represents a DNA-binding Helix-turn-helix domain
#=GF CC   found in transcriptional regulatory proteins.
#=GF SQ   25765
#=GS A0A1F5D3J8_9ARCH/125-185  AC A0A1F5D3J8.1
#=GS A0A1R1F1V1_9BACL/3-61     AC A0A1R1F1V1.1
#=GS A0A062VB69_9RHOB/5-65     AC A0A062VB69.1
#=GS A0A1I3VVM8_9BRAD/1-60     AC A0A1I3VVM8.1
#=GS A0A0Q8CDV1_9MICO/12-71    AC A0A0Q8CDV1.1
#=GS A0A101S5W2_9ACTN/8-67     AC A0A101S5W2.1
#=GS D3SQN7_NATMM/13-68        AC D3SQN7.1
#=GS C0Z5S8_BREBN/14-74        AC C0Z5S8.1
#=GS A0A1G8M2G5_9ACTN/14-74    AC A0A1G8M2G5.1
#=GS A0A1C4T272_9ACTN/19-73    AC A0A1C4T272.1
#=GS A0A1C0S9E6_9RHIZ/6-66     AC A0A1C0S9E6.1
#=GS A0A1C5H4P8_9ACTN/13-72    AC A0A1C5H4P8.1
#=GS A0A0L6CKZ7_9MICO/6-64     AC A0A0L6CKZ7.1
#=GS A0A0X8QZF9_9SPHN/7-69     AC A0A0X8QZF9.1
#=GS A0A101N6A7_9ACTN/22-80    AC A0A101N6A7.1
#=GS A0A0Q9A179_9ACTN/13-73    AC A0A0Q9A179.1
#=GS A0A1G5DZ64_9ACTN/11-69    AC A0A1G5DZ64.1
#=GS A0A0C2USE6_9BACL/7-66     AC A0A0C2USE6.1
#=GS A0A1Q5N119_9ACTN/13-70    AC A0A1Q5N119.1
#=GS A0A0Q8B076_9PSED/17-76    AC A0A0Q8B076.1
#=GS D4XE23_9BURK/22-95        AC D4XE23.1
#=GS C1B651_RHOOB/12-72        AC C1B651.1
#=GS A0A1G9IUW1_9ACTN/8-65     AC A0A1G9IUW1.1
#=GS A0A1N6WD51_9FIRM/24-83    AC A0A1N6WD51.1
#=GS A0A1K2HZD7_9RHIZ/2-64     AC A0A1K2HZD7.1
#=GS F8B6A8_FRADG/22-82        AC F8B6A8.1
#=GS A0A1V2QF27_9PSEU/15-73    AC A0A1V2QF27.1
#=GS A0A1G7SJ58_9ACTN/256-314  AC A0A1G7SJ58.1
#=GS A0A1M6FLP6_9ACTN/9-68     AC A0A1M6FLP6.1
#=GS H5TVW9_9ACTN/8-67         AC H5TVW9.1
#=GS B1W0N0_STRGG/12-71        AC B1W0N0.1
#=GS A0A132PRH8_9MYCO/12-71    AC A0A132PRH8.1
#=GS A0A1H7VGJ1_9ACTN/265-313  AC A0A1H7VGJ1.1
#=GS A0A0Q9YUD9_9COXI/12-74    AC A0A0Q9YUD9.1
#=GS A0A151DL49_9ACTN/24-83    AC A0A151DL49.1
#=GS F2NI59_DESAR/10-70        AC F2NI59.1
#=GS A0A229T057_9PSEU/12-72    AC A0A229T057.1
#=GS C0Z6G9_BREBN/219-277      AC C0Z6G9.1
#=GS A0A1H7VKJ6_STIAU/7-66     AC A0A1H7VKJ6.1
#=GS D0LUP5_HALO1/7-66         AC D0LUP5.1
#=GS A0A1H1RTU1_9ACTN/11-70    AC A0A1H1RTU1.1
#=GS H5XC60_9PSEU/2-75         AC H5XC60.1
#=GS Q1LQT8_CUPMC/7-67         AC Q1LQT8.1
#=GS A0A0B4CZN4_9MICC/3-62     AC A0A0B4CZN4.1
#=GS A0A1Y5X155_KIBAR/208-266  AC A0A1Y5X155.1
#=GS A0A0Q9N783_9MICC/8-67     AC A0A0Q9N783.1
#=GS A0A0M8Z0L4_9ACTN/244-302  AC A0A0M8Z0L4.1
#=GS A0A1W1VS71_DESTI/14-74    AC A0A1W1VS71.1
#=GS A0A1R1DCJ6_9BACL/8-67     AC A0A1R1DCJ6.1
#=GS A0A0M2HNV1_9MICO/2-68     AC A0A0M2HNV1.1
#=GS A0A1M3PVL8_9PROT/7-69     AC A0A1M3PVL8.1
#=GS A0A1A2B9N6_9MYCO/10-69    AC A0A1A2B9N6.1
#=GS A0A1G5QZS7_9GAMM/43-102   AC A0A1G5QZS7.1
#=GS C5C0D2_BEUC1/12-71        AC C5C0D2.1
#=GS A3V7T2_9RHOB/8-70         AC A3V7T2.1
#=GS A0A073IUT6_9RHOB/6-68     AC A0A073IUT6.1
#=GS E8NDR6_MICTS/6-65         AC E8NDR6.1
#=GS A0A2G1WGG9_9EURY/6-64     AC A0A2G1WGG9.1
#=GS A0A1S1SZD3_9RHIZ/10-69    AC A0A1S1SZD3.1
#=GS W0K0V3_9EURY/14-65        AC W0K0V3.1
#=GS A0A1M7GCN4_9GAMM/7-69     AC A0A1M7GCN4.1
#=GS A0A239BMV7_9ACTN/10-69    AC A0A239BMV7.1
#=GS A0A1I7E1M5_9RHIZ/8-68     AC A0A1I7E1M5.1
#=GS H8N1K7_CORCM/3-61         AC H8N1K7.1
#=GS F8C1F4_OLICO/7-69         AC F8C1F4.1
#=GS V5XQR9_ENTMU/11-68        AC V5XQR9.1
#=GS A0A221W2V8_9PSEU/32-93    AC A0A221W2V8.1
#=GS D0WLB9_9ACTO/17-75        AC D0WLB9.1
#=GS A9HXG5_BORPD/4-75         AC A9HXG5.1
#=GS A0A0L0KKH1_9ACTN/12-73    AC A0A0L0KKH1.1
#=GS A0A1I6L6D6_9MICO/20-79    AC A0A1I6L6D6.1
#=GS A0A2A5GE98_9GAMM/3-77     AC A0A2A5GE98.1
#=GS D2RYA4_HALTV/13-68        AC D2RYA4.1
#=GS A0A089J6Z5_9BACL/12-65    AC A0A089J6Z5.1
#=GS D0SFP8_ACIJO/6-79         AC D0SFP8.1
#=GS A0A1X4NME8_9RHOB/6-65     AC A0A1X4NME8.1
#=GS Q93J86_STRCO/18-78        AC Q93J86.1
#=GS A0A0Q8BBW1_9PSED/8-68     AC A0A0Q8BBW1.1
#=GS A0A1E4P7Q4_9PSEU/2-64     AC A0A1E4P7Q4.1
#=GS A0A1B9SG16_9RHIZ/9-68     AC A0A1B9SG16.1
#=GS A0A062VJ34_9RHOB/7-65     AC A0A062VJ34.1
#=GS A0A1A2CWX0_9MYCO/3-62     AC A0A1A2CWX0.1
#=GS A0A263DTV8_9PSEU/1-58     AC A0A263DTV8.1
#=GS Z9JWL1_9MICO/11-71        AC Z9JWL1.1
#=GS A0A1E3LQS6_9SPHN/6-65     AC A0A1E3LQS6.1
#=GS A0A0T1Q5M6_9ACTN/2-62     AC A0A0T1Q5M6.1
#=GS E0TCU6_PARBH/7-70         AC E0TCU6.1
#=GS A0A0H3C4L0_CAUVN/9-68     AC A0A0H3C4L0.1
#=GS E8W211_STRFA/13-72        AC E8W211.1
#=GS A0A1N7F028_9RHOB/6-65     AC A0A1N7F028.1
#=GS A0A117R239_9ACTN/15-74    AC A0A117R239.1
#=GS A0A099F3W0_9RHOB/7-69     AC A0A099F3W0.1
#=GS A0A1B2HM79_9PSEU/15-73    AC A0A1B2HM79.1
#=GS A0A1Q3L527_9MICO/4-64     AC A0A1Q3L527.1
#=GS A0A0B4DG07_9MICC/2-62     AC A0A0B4DG07.1
#=GS D2SFA7_GEOOG/4-62         AC D2SFA7.1
#=GS A0A1H9SXW5_9PSEU/10-71    AC A0A1H9SXW5.1
#=GS A0A062VDM5_9EURY/131-191  AC A0A062VDM5.1
#=GS A0A1W6MX66_9RHIZ/9-68     AC A0A1W6MX66.1
#=GS A0A1W9Z4P9_9MYCO/4-67     AC A0A1W9Z4P9.1
#=GS A0A263DCF0_9PSEU/18-77    AC A0A263DCF0.1
#=GS A0A1Q5DVB4_9ACTN/289-348  AC A0A1Q5DVB4.1
#=GS A0A243S3F5_9ACTN/86-146   AC A0A243S3F5.1
#=GS A0A254QXN5_9RHOB/5-65     AC A0A254QXN5.1
#=GS A0A1I6IJQ5_9EURY/75-135   AC A0A1I6IJQ5.1
#=GS A0A1V9EUY2_9BACT/6-66     AC A0A1V9EUY2.1
#=GS T0R050_9PROT/10-69        AC T0R050.1
#=GS A0A1I2E2S0_9RHOB/7-67     AC A0A1I2E2S0.1
#=GS A0A1N6XPC3_9BRAD/7-69     AC A0A1N6XPC3.1
#=GS A0A132NAM1_HYDSH/6-66     AC A0A132NAM1.1
#=GS A0A077M1W4_9MICO/8-67     AC A0A077M1W4.1
#=GS G5ZZG5_9PROT/15-76        AC G5ZZG5.1
#=GS A0A0D0Q8Y3_9RHOB/4-63     AC A0A0D0Q8Y3.1
#=GS A0A0K1Q5T5_9DELT/26-85    AC A0A0K1Q5T5.1
#=GS A0A0N9I131_9PSEU/20-81    AC A0A0N9I131.1
#=GS A0A163X5D4_9RHOB/12-72    AC A0A163X5D4.1
#=GS A0A239K0N6_9ACTN/5-64     AC A0A239K0N6.1
#=GS A4FA78_SACEN/71-132       AC A4FA78.1
#=GS Q73WD5_MYCPA/19-71        AC Q73WD5.1
#=GS A0A0W1SSZ5_9EURY/13-69    AC A0A0W1SSZ5.1
#=GS G2NGW1_STREK/19-77        AC G2NGW1.1
#=GS A0A1G5Z9V7_9BACT/17-76    AC A0A1G5Z9V7.1
#=GS A0A1H5PDB1_9ACTN/10-69    AC A0A1H5PDB1.1
#=GS A0A2A6FAU3_9RHIZ/7-69     AC A0A2A6FAU3.1
#=GS A0A0R3DGK6_9BRAD/7-69     AC A0A0R3DGK6.1
#=GS S5T613_9CORY/2-62         AC S5T613.1
#=GS A0A1F7TAB0_9BACT/6-65     AC A0A1F7TAB0.1
#=GS A0A0X3W578_9ACTN/17-77    AC A0A0X3W578.1
#=GS W1SDV3_9BACI/5-66         AC W1SDV3.1
#=GS A0A1Y1RL42_9BACT/12-72    AC A0A1Y1RL42.1
#=GS A0A264W020_9BACL/264-327  AC A0A264W020.1
#=GS A0A191UWF6_9ACTN/12-72    AC A0A191UWF6.1
#=GS A0A1W1US78_9DEIO/12-71    AC A0A1W1US78.1
#=GS A0A1H9RAM1_9CORY/87-143   AC A0A1H9RAM1.1
#=GS V6KB43_STRNV/250-306      AC V6KB43.1
#=GS A0A1H8TWN1_9ACTN/49-107   AC A0A1H8TWN1.1
#=GS C6VUC3_DYAFD/5-64         AC C6VUC3.1
#=GS A0A1H3MQU1_9EURY/47-108   AC A0A1H3MQU1.1
#=GS A0A109YMU4_9SPHN/8-68     AC A0A109YMU4.1
#=GS A0A1B6Z7J7_9SPHN/2-62     AC A0A1B6Z7J7.1
#=GS A0A1Q3TPX4_9SPHI/5-64     AC A0A1Q3TPX4.1
#=GS A0A1G2SYU9_9BACT/7-66     AC A0A1G2SYU9.1
#=GS A0A1H2DDJ0_9ACTN/74-134   AC A0A1H2DDJ0.1
#=GS W8I3L5_ENSAD/8-68         AC W8I3L5.1
#=GS F8D7F7_HALXS/47-108       AC F8D7F7.1
#=GS A0A285QTR6_9ACTN/7-66     AC A0A285QTR6.1
#=GS A0A0G3HFX9_9CORY/20-81    AC A0A0G3HFX9.1
#=GS A0A1R1S4U4_9ACTN/17-78    AC A0A1R1S4U4.1
#=GS A0A1H5C9Q8_9ACTN/251-309  AC A0A1H5C9Q8.1
#=GS A0A0W8IHA7_9MICO/4-64     AC A0A0W8IHA7.1
#=GS A0A1U6H3X3_9MICC/12-71    AC A0A1U6H3X3.1
#=GS A0A291GU00_9MICO/7-66     AC A0A291GU00.1
#=GS A0A1H2JRM8_9ACTN/7-66     AC A0A1H2JRM8.1
#=GS G8NWP8_GRAMM/7-66         AC G8NWP8.1
#=GS A0A1M4XJG9_9FLAO/17-77    AC A0A1M4XJG9.1
#=GS W4BD29_9BACL/220-278      AC W4BD29.1
#=GS A0A1H2QKZ3_9BACI/8-85     AC A0A1H2QKZ3.1
#=GS A0A0Q5D2F8_9RHIZ/9-68     AC A0A0Q5D2F8.1
#=GS B9K1N7_AGRVS/2-60         AC B9K1N7.1
#=GS S4MPZ4_9ACTN/294-352      AC S4MPZ4.1
#=GS B9K599_AGRVS/15-73        AC B9K599.1
#=GS A0A0H1A1U1_9RHIZ/10-69    AC A0A0H1A1U1.1
#=GS A0A1B2HPK0_9PSEU/20-81    AC A0A1B2HPK0.1
#=GS A0A0F7PL43_9RHIZ/16-76    AC A0A0F7PL43.1
#=GS K0K0E4_SACES/229-285      AC K0K0E4.1
#=GS A0A0R1PEW4_9LACO/11-72    AC A0A0R1PEW4.1
#=GS N8QGR7_9GAMM/4-78         AC N8QGR7.1
#=GS A0A1G2EVU8_9BACT/12-72    AC A0A1G2EVU8.1
#=GS A0A231R577_9BACL/9-66     AC A0A231R577.1
#=GS A0A1X4N7C9_9PROT/4-78     AC A0A1X4N7C9.1
#=GS A0A0X3V297_9ACTN/7-67     AC A0A0X3V297.1
#=GS A9ISN7_BORPD/37-97        AC A9ISN7.1
#=GS A0A126Z3I5_9MICO/18-78    AC A0A126Z3I5.1
#=GS A0A0T6LM95_9ACTN/14-74    AC A0A0T6LM95.1
#=GS Q3IZ10_RHOS4/9-68         AC Q3IZ10.1
#=GS A0A1A7BFI1_9SPHN/8-67     AC A0A1A7BFI1.1
#=GS K0PNV4_9RHIZ/15-78        AC K0PNV4.1
#=GS A0A1I3S465_9RHOB/8-69     AC A0A1I3S465.1
#=GS A0A1Q9RTQ6_9PSEU/10-68    AC A0A1Q9RTQ6.1
#=GS A0A0Q7NEQ0_9NOCA/2-60     AC A0A0Q7NEQ0.1
#=GS A0A1I2JCM5_9BACT/18-78    AC A0A1I2JCM5.1
#=GS M4S2D1_9SPHN/4-66         AC M4S2D1.1
#=GS A0A1V3NFT2_9GAMM/3-69     AC A0A1V3NFT2.1
#=GS A0A109YNB8_9SPHN/7-69     AC A0A109YNB8.1
#=GS A0A1H7N8J9_9BURK/14-74    AC A0A1H7N8J9.1
#=GS A0A0C2Q8M3_9BACL/8-68     AC A0A0C2Q8M3.1
#=GS A0A1G5Y5B3_9RHIZ/9-68     AC A0A1G5Y5B3.1
#=GS A6L7W8_BACV8/14-72        AC A6L7W8.1
#=GS A0A159Z6U2_9RHOB/7-69     AC A0A159Z6U2.1
#=GS B5H9L7_STRE2/11-72        AC B5H9L7.2
#=GS A0A239PV26_9RHOB/6-66     AC A0A239PV26.1
#=GS B9LWW2_HALLT/47-108       AC B9LWW2.1
#=GS U4UVR4_9RHOB/8-67         AC U4UVR4.1
#=GS C3PG54_CORA7/12-66        AC C3PG54.1
#=GS A0A1V4ELZ5_9ACTN/1-54     AC A0A1V4ELZ5.1
#=GS A0A0Q7WH25_9RHIZ/7-69     AC A0A0Q7WH25.1
#=GS A0A1G6XQ80_9MICO/12-71    AC A0A1G6XQ80.1
#=GS C9CTS7_9RHOB/7-67         AC C9CTS7.1
#=GS I0V7M2_9PSEU/16-77        AC I0V7M2.1
#=GS F2LL40_BURGS/6-80         AC F2LL40.1
#=GS B9M8S7_GEODF/7-75         AC B9M8S7.1
#=GS A0A1K2HKB4_9BURK/8-69     AC A0A1K2HKB4.1
#=GS A0A0U5CZ94_9EURY/75-135   AC A0A0U5CZ94.1
#=GS A0A1H4L3L8_9MICC/15-74    AC A0A1H4L3L8.1
#=GS H0TGF6_9BRAD/1-60         AC H0TGF6.1
#=GS A0A0X3SIU0_9ACTN/10-69    AC A0A0X3SIU0.1
#=GS A0A1L3SY35_9RHIZ/9-68     AC A0A1L3SY35.1
#=GS F4LTD6_TEPAE/12-72        AC F4LTD6.1
#=GS A0A1I0PA43_9EURY/13-68    AC A0A1I0PA43.1
#=GS A0A1H0B0R8_9BACL/12-70    AC A0A1H0B0R8.1
#=GS A0A090ETM0_9RHIZ/6-66     AC A0A090ETM0.1
#=GS A0A1U7JCT2_9RHOB/5-69     AC A0A1U7JCT2.1
#=GS G2MLS6_9EURY/33-92        AC G2MLS6.1
#=GS L1MES5_9CORY/18-77        AC L1MES5.1
#=GS A0A1G7K9U7_9PSEU/3-54     AC A0A1G7K9U7.1
#=GS A5PAW1_9SPHN/4-63         AC A5PAW1.1
#=GS A0A1H0RHZ0_9ACTN/255-312  AC A0A1H0RHZ0.1
#=GS A0A1X1YQM5_9MYCO/6-66     AC A0A1X1YQM5.1
#=GS E1TDC1_BURSG/11-83        AC E1TDC1.1
#=GS V6UBK5_9ACTN/279-346      AC V6UBK5.1
#=GS A0A1H3FKA7_9ACTN/8-69     AC A0A1H3FKA7.1
#=GS U2T7S9_LEIAQ/9-68         AC U2T7S9.1
#=GS Q7CRC7_AGRFC/14-73        AC Q7CRC7.1
#=GS E3J5P2_FRAIE/15-74        AC E3J5P2.1
#=GS D4YY25_SPHJU/35-96        AC D4YY25.1
#=GS I0RHI3_MYCXE/11-70        AC I0RHI3.1
#=GS A0A126V5Q2_9RHOB/6-68     AC A0A126V5Q2.1
#=GS A0A0U3Q3Q1_9ACTN/257-309  AC A0A0U3Q3Q1.1
#=GS A0A1B2HXI0_9PSEU/13-70    AC A0A1B2HXI0.1
#=GS A0A1H2RK67_9RHOB/5-64     AC A0A1H2RK67.1
#=GS A0A1V2IIR8_9ACTN/10-68    AC A0A1V2IIR8.1
#=GS V4J2G8_9ACTN/16-76        AC V4J2G8.1
#=GS A0A1V5EMV1_9BRAD/2-64     AC A0A1V5EMV1.1
#=GS A0A0B9A4S1_9SPHN/10-69    AC A0A0B9A4S1.1
#=GS S6AIB8_PSERE/8-80         AC S6AIB8.1
#=GS A0A1W9ZKR9_9MYCO/5-60     AC A0A1W9ZKR9.1
#=GS C1B9N5_RHOOB/8-67         AC C1B9N5.1
#=GS I3TKN5_TISMK/12-71        AC I3TKN5.1
#=GS A0A1V0KXV3_9GAMM/14-73    AC A0A1V0KXV3.1
#=GS A0A176EWF2_9RHOB/6-65     AC A0A176EWF2.1
#=GS E6WM01_PANSA/21-81        AC E6WM01.1
#=GS A0A1H9JC17_9SPHN/7-67     AC A0A1H9JC17.1
#=GS A0A1H1EJZ1_9ACTN/13-73    AC A0A1H1EJZ1.1
#=GS A0A178HLW4_9RHIZ/14-73    AC A0A178HLW4.1
#=GS A0A0U3XWQ2_9MICO/10-70    AC A0A0U3XWQ2.1
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