GenomeNet

Database: Pfam
Entry: Herpes_US9
LinkDB: Herpes_US9
Original site: Herpes_US9 
#=GF ID   Herpes_US9
#=GF AC   PF06072.12
#=GF DE   Alphaherpesvirus tegument protein US9
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_7164 (release 9.0)
#=GF GA   23.70 23.70;
#=GF TC   23.70 34.20;
#=GF NC   22.90 23.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   11907224
#=GF RT   Bovine herpesvirus 5 (BHV-5) Us9 is essential for BHV-5
#=GF RT   neuropathogenesis. 
#=GF RA   Chowdhury SI, Onderci M, Bhattacharjee PS, Al-Mubarak A, Weiss
#=GF RA   ML, Zhou Y; 
#=GF RL   J Virol 2002;76:3839-3851.
#=GF DR   INTERPRO; IPR009278;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of several US9 and related proteins from
#=GF CC   the Alphaherpesviruses. The function of the US9 protein is
#=GF CC   unknown although in Bovine herpesvirus 5 Us9 is essential for
#=GF CC   the anterograde spread of the virus from the olfactory mucosa to
#=GF CC   the bulb [1].
#=GF SQ   19
#=GS A2SUF1_FHV1/87-145       AC A2SUF1.1
#=GS A0A077B7Q0_9ALPH/66-124  AC A0A077B7Q0.1
#=GS US9_VZVD/43-101          AC P09312.1
#=GS A0A0U2SSZ6_9ALPH/82-140  AC A0A0U2SSZ6.1
#=GS J9QVE5_9ALPH/21-79       AC J9QVE5.1
#=GS A0A060Q1X7_9ALPH/37-95   AC A0A060Q1X7.1
#=GS Q77JF8_HHV3/43-101       AC Q77JF8.1
#=GS A0A288CFY0_EHV4/161-218  AC A0A288CFY0.1
#=GS Q8V720_CHV1/30-88        AC Q8V720.1
#=GS O41527_9ALPH/57-112      AC O41527.1
#=GS Q5PP80_9ALPH/40-98       AC Q5PP80.1
#=GS US9_HHV11/31-89          AC P06481.1
#=GS A0A077B7N8_9ALPH/58-116  AC A0A077B7N8.1
#=GS US9_HHV2H/30-88          AC P89477.1
#=GS A0A1R3TB17_9ALPH/60-118  AC A0A1R3TB17.1
#=GS I1V8J0_9ALPH/160-218     AC I1V8J0.1
#=GS US9_EHV1B/160-218        AC P28930.1
#=GS US9_CHV9D/39-76          AC Q04546.1
#=GS E2IUI1_SHV1/45-103       AC E2IUI1.1
A2SUF1_FHV1/87-145                  .CYYSESDNETATLFINRIGKRETAKRR..RRR-....-RCLVA.LA.VsgVATLCVLSGLL--GALLWRL-m..........
A0A077B7Q0_9ALPH/66-124             .CYYSESDNETAGMFIRRVGRRQTSRRR..RRQ-....--CALT.VAgV..ALVVALCAISGVAGAFLARL-l..........
US9_VZVD/43-101                     .CYYSDSENETADEFLRRIGKYQHKIYH..RKK-....-FCYIT.LI.I..VFVFAMTGAAFALGYITSQFV...........
A0A0U2SSZ6_9ALPH/82-140             .CYYSESDSETAGEFLIRMGRQQRR-RH..RRR-....-RCMIAaAL.T..CIGLGACAAAAAAGAVL----alev.......
J9QVE5_9ALPH/21-79                  .CYYSESDDESAEQFFSRAVQQRRREAR..SVAR....RKAVIV.AA.V..LLALSTISAGT--GALIAWLL...........
A0A060Q1X7_9ALPH/37-95              i-FYSESEDEAASEFLLRVNRQQTDACR..RRRR....ARLLGI.LG.A..GLALSLSSAGL--GVLIFWA-l..........
Q77JF8_HHV3/43-101                  .CYYSDSENETADEFLRRIGKYQHKIYH..RKK-....-FCYIT.LI.I..VFVFAMTGAAFALGYITSQFV...........
A0A288CFY0_EHV4/161-218             .CYYSESDNETASLFIQRVGRRQARRHR..RRR-....--VALT.VA.G..VVLVAVLCAI-----------sgivgaflarv
Q8V720_CHV1/30-88                   .AYYTESDDETAADFLVRMGRQQTALRR..RRRQ....TRAVGC.VA.A..FVLVALISGGL--GALVCWLV...........
O41527_9ALPH/57-112                 .CYYSERDNETATLFLKRVG-YRETSKK..RKR-....-ICGFI.VL.A..IFMVIILC-------------flsiilgvfia
Q5PP80_9ALPH/40-98                  .CYYSESDNETPSEFLRRVGRRQAARRR..RRRC....LMGVAI.SA.A..ALVICSLSALI--GG------iiarhv.....
US9_HHV11/31-89                     .AYYSESEDEAANDFLVRMGRQQSVLRR..RRRR....TRCVGM.VI.A..CLLVAVLSGGF--GALLMWLL...........
A0A077B7N8_9ALPH/58-116             .CYYSESDNETAGMFIRRVGRRQTSRRR..RRQ-....--CALT.VAgV..ALVVALCAISGVAGAFLARL-l..........
US9_HHV2H/30-88                     .AYYSESEDEAANDFLVRMGRQQSVLRR..RRRR....TRCVGL.VI.A..CLVVALLSGGF--GALLVWLL...........
A0A1R3TB17_9ALPH/60-118             .CSYSESEDGSADLFLYKVGKRQTIIRR..RRRIrkiiIFCILS.II.A..CTSSAVAGATIA---------ini........
I1V8J0_9ALPH/160-218                .CYYSESDNETASMFIRRVGRRQARRHK..RRRV....ALTVAG.VI.L..VVVLCAISGIV--GAFL----arvf.......
US9_EHV1B/160-218                   .CYYSESDNETASMFIRRVGRRQARRHR..RRRV....ALTVAG.VI.L..VVVLCAISGIV--GAFL----arvf.......
US9_CHV9D/39-76                     .CYYSDSDNEKATEFLRRIGKHQHKKKNsvKKR-....------.--.-..---------------------vtflvy.....
E2IUI1_SHV1/45-103                  .CYYSESDDEAAGEFLLRVSRQHAAVRR..RRRR....WRCVAI.AL.G..VTAGCVFSAGL--GVLVFWV-m..........
#=GC seq_cons                       .CYYSESDsETAs.FLpRlGRpQsph+R..RRR......hsshs.lh.s..slsluhhuush..Gshl....h..........
//
DBGET integrated database retrieval system