GenomeNet

Database: Pfam
Entry: L-fibroin
LinkDB: L-fibroin
Original site: L-fibroin 
#=GF ID   L-fibroin
#=GF AC   PF05849.12
#=GF DE   Fibroin light chain (L-fibroin)
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_9321 (release 8.0)
#=GF GA   25.00 25.00;
#=GF TC   26.20 54.30;
#=GF NC   20.40 18.90;
#=GF BM   hmmbuild --amino HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   10366732
#=GF RT   Determination of the site of disulfide linkage between heavy and
#=GF RT   light chains of silk fibroin produced by Bombyx mori. 
#=GF RA   Tanaka K, Kajiyama N, Ishikura K, Waga S, Kikuchi A, Ohtomo K,
#=GF RA   Takagi T, Mizuno S; 
#=GF RL   Biochim Biophys Acta 1999;1432:92-103.
#=GF DR   INTERPRO; IPR008660;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of several moth fibroin light chain
#=GF CC   (L-fibroin) proteins. Fibroin of the silkworm, Bombyx mori, is
#=GF CC   secreted into the lumen of posterior silk gland (PSG) from the
#=GF CC   surrounding PSG cells as a molecular complex consisting of a
#=GF CC   heavy (H)-chain of approximately 350 kDa, a light (L)-chain of
#=GF CC   25 kDa and a P25 of about 27 kDa. The H- and L-chains are
#=GF CC   disulfide-linked but P25 is associated with the H-L complex by
#=GF CC   non-covalent force [1].
#=GF SQ   8
#=GS A0A3S2NFE9_CHISP/19-262  AC A0A3S2NFE9.1
#=GS A0A194QD94_PAPXU/18-242  AC A0A194QD94.1
#=GS FIBL_BOMMO/18-256        AC P21828.1
#=GS A0A212EQ24_DANPL/18-262  AC A0A212EQ24.1
#=GS A0A0N1PIW2_PAPMA/18-255  AC A0A0N1PIW2.1
#=GS A0A0N0P9R6_PAPXU/9-173   AC A0A0N0P9R6.1
#=GS A0A2A4JXS4_HELVI/18-261  AC A0A2A4JXS4.1
#=GS A0A0N1ICD9_PAPXU/9-108   AC A0A0N1ICD9.1
A0A3S2NFE9_CHISP/19-262             ........................vp--VTLTQYSINEIPPLNENGRfISS..ALTRnALDNV.DG.GDSNVYTLTLLEGVHDLANQQDRNSQSLAIAQTIAILGELATGVPGQSCEAAAVINAFAGSVRTGNKSGLRPAVMNYLARLANNIDLIVGLVNNPDSLRSAVGPRGNCAGGGRRYEFEAVWDAVLNSA...NintVGLLNEQYCSSKRLYSAFNIRTNNVGAAATAAAVPQVTRAVGQALNAVVPFLKVVANGGNPAGLAAGAKQA----llra..........
A0A194QD94_PAPXU/18-242             ..........................PSVTVTQYNANDIPPVPDNGK.PSS..SIEN.AFDVL.SDgGDTNIYILTIRQILNDLANQSDSKSQALAVGQAIAILGELAYGNPGDACAAAELVNAYT----SGNKAATRAALGNFIQSLVANIDSLVQLILNPNSVRYSFKLQDAVAISKRQ-------RIILV--...-...LCLYNEEYCAAKRLYNAFNIRSNNVGAAVTAASLSPVTKVVQRAYSTLANLLRAIGNNGNVIGAAAAAK------vellr.........
FIBL_BOMMO/18-256                   ..........................PSVTINQYSDNEIPRDIDDGK.ASS..VISR.AWDYV.DD.TDKSIAILNVQEILKDMASQGDYASQASAVAQTAGIIAHLSAGIPGDACAAANVINSYTDGVRSGNFAGFRQSLGPFFGHVGQNLNLINQLVINPGQLRYSVGPALGCAGGGRIYDFEAAWDAILASS...D...SSFLNEEYCIVKRLYNSRNSQSNNIAAYITAHLLPPVAQVFHQSAGSITDLLRGVGNGNDATGLVANAQRYIAQA..............
A0A212EQ24_DANPL/18-262             .......................pta---LVNFVDVNEARPVIDNGQ.LVSraLIDK.VFELI.DG.ADIPLYAQMMIQSVNDQANSGDAASQASAVVLAINAIAELANGIPGDACESAALVNAYAYAVSTGNSAGLRSALVKYVQRINANIDAIVRLVNSPDSVRYSSGPRGNCIGGGRSYQFEEAWDDILNNA...NpfqIGLLNEEYCAAKRMYNAPSVRSNNLAATVTASLSRYVNQIGQNALGPLAEFLRAAAIGGNLNVSAGNAK------aalsral.......
A0A0N1PIW2_PAPMA/18-255             ..........................PSVTVTQYNANDIPPVPDNGK.PSS..SIEN.AFSVLnDD.GDSNIYILTIRQILNDLANQADPKSRALAVGQAIALLGELVYGSPGDACIAAELINAYT----SGNKAATSAALVNFIQSLVANIDSFVQLILNPNSVRYSSGRRGNCVGGGRNYNFEGAWDSVLSEA...DpflSSLYNEEYCAAKRLYNAFNIRSNNVGAAVTAASLSPVTEVVQKAYGSLTNLLRAIGNNGNVIGAAAAAK------vellr.........
A0A0N0P9R6_PAPXU/9-173              .....................yfsdf---------------------.-SS..SIEN.AFDVL.SDgGDTNIYILTIRQILNDLANQSDSKSQALAVGQAIAILGELAYGNPGDACAAAELVNAYT----SGNKAATRAALVNFIQSLVANIDSFVQLILNPNSVRYSSGRRGNCVGGGRSYNFEAAWDSVLSEA...D...P-FLS-RYSLIQQEINFQN--------------------------------------------------------klqn..........
A0A2A4JXS4_HELVI/18-261             ..................pgvnlsir--------NVNEVVPPRHNGR.AVSafLTNQ.AFENI.DG.GDTVPYVLNFQQVVDDLANQGDKSSQALAAGQVIAILGSLSTGIPGDACAPANFIDSYVASLRNGNSV--APALGKFVGAIKQHIDQIVQYLNNPNQLKNAVGPRGNCNGGGRNYQFEAAWDAILSNAsgaS...AGLVNEQYCAAKRLYSAFGLQSSSLGAYVTAVSLPPVNRVLQDALEPVAKFVASLSSGNYAAA------------aagaknaldnalry
A0A0N1ICD9_PAPXU/9-108              itsqrmwevnnsvnaelnvksskycv---------------------.---..----.-----.--.--------------------------------------------------------------------------------------------------------------------------------...-...ISLYNEEYCAAKRLYNAFNIRSNNVGAAVTAASLSPVTKVVQRAYSTLANLLRAIGNNGNVIGAAAAAK------vellr.........
#=GC seq_cons                       .............................hls.hssN-lsPs.-NG+..SS..sIpp.AF-sl.Ds.GDoslYlLslpQllsDLANQuDtpSQALAVuQsIAILGELuhG.PGDACtAApllNAYs....oGNpAuhRsALssFltplssNIDtlVQLl.NPsSlRYSsG.RGNCsGGGRpYpFEuAWDulLspA...s...suLlNEEYCAAKRLYNAFNlRSNNlGAsVTAuuLsPVscVlQpAhuslsshLRuluNsGNshGhAAsAK......sthh+.........
//
DBGET integrated database retrieval system