GenomeNet

Database: Pfam
Entry: LPD26
LinkDB: LPD26
Original site: LPD26 
#=GF ID   LPD26
#=GF AC   PF18842.1
#=GF DE   Large polyvalent protein associated domain 26
#=GF AU   Mistry J;0000-0003-2479-5322
#=GF AU   El-Gebali S;0000-0003-1378-5495
#=GF AU   Iyer LM;0000-0002-4844-2022
#=GF AU   Aravind L;0000-0003-0771-253X
#=GF AU   Burroughs AM;0000-0002-2229-8771
#=GF SE   Iyer LM
#=GF GA   27.00 27.00;
#=GF TC   69.70 69.70;
#=GF NC   25.00 24.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 45638612 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   28559295
#=GF RT   Polyvalent Proteins, a Pervasive Theme in the Intergenomic
#=GF RT   Biological Conflicts of Bacteriophages and Conjugative Elements.
#=GF RA   Iyer LM, Burroughs AM, Anand S, de Souza RF, Aravind L;
#=GF RL   J Bacteriol. 2017; [Epub ahead of print]
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This is a small alpha-helical domain with two acidic residues
#=GF CC   conserved in a predicted loop between two of its helices [1].
#=GF CC   The domain is mainly found in polyvalent proteins of conjugative
#=GF CC   elements [1].
#=GF SQ   37
#=GS R9IJC1_9FIRM/10-66        AC R9IJC1.1
#=GS U2CH59_9CLOT/10-66        AC U2CH59.1
#=GS A0A1C0ADS7_9FIRM/890-951  AC A0A1C0ADS7.1
#=GS N1Z9H3_9CLOT/10-66        AC N1Z9H3.1
#=GS H1BN19_9FIRM/796-858      AC H1BN19.1
#=GS S2LAH6_9FIRM/793-855      AC S2LAH6.1
#=GS A0A0S2W770_9FIRM/890-951  AC A0A0S2W770.1
#=GS A0A1Y4LDF5_9FIRM/906-967  AC A0A1Y4LDF5.1
#=GS A0A143Y2M1_9FIRM/890-951  AC A0A143Y2M1.1
#=GS C0EFU8_9FIRM/10-66        AC C0EFU8.1
#=GS E7GQ73_CLOSY/890-951      AC E7GQ73.1
#=GS R9JCC7_9FIRM/15-71        AC R9JCC7.1
#=GS A0A1Y3Y256_9FIRM/890-951  AC A0A1Y3Y256.1
#=GS B9YBX0_9FIRM/561-623      AC B9YBX0.1
#=GS A0A1Y4NQA5_9FIRM/891-952  AC A0A1Y4NQA5.1
#=GS C4ZEQ4_AGARV/10-66        AC C4ZEQ4.1
#=GS A0A1Y4EV43_9FIRM/805-867  AC A0A1Y4EV43.1
#=GS A0A1Y4RL54_9FIRM/890-951  AC A0A1Y4RL54.1
#=GS E2ZM36_9FIRM/10-66        AC E2ZM36.1
#=GS G9RVI4_9FIRM/554-616      AC G9RVI4.1
#=GS U2R1K1_9FIRM/891-952      AC U2R1K1.1
#=GS V2YEN2_9FIRM/10-66        AC V2YEN2.1
#=GS U2AJW9_9CLOT/907-968      AC U2AJW9.1
#=GS A0A143X366_9FIRM/891-952  AC A0A143X366.1
#=GS R9LCU2_9FIRM/90-152       AC R9LCU2.1
#=GS C0EI13_9FIRM/11-67        AC C0EI13.1
#=GS A0A1Y4TJP8_9FIRM/728-790  AC A0A1Y4TJP8.1
#=GS D6DKQ7_CLOSC/890-951      AC D6DKQ7.1
#=GS R9N325_9FIRM/15-71        AC R9N325.1
#=GS C0D7C8_9FIRM/591-647      AC C0D7C8.1
#=GS R9LJM8_9FIRM/10-66        AC R9LJM8.1
#=GS C0CYA6_9FIRM/906-967      AC C0CYA6.1
#=GS E7GMB8_CLOSY/10-66        AC E7GMB8.1
#=GS F0Z1Z3_9CLOT/771-833      AC F0Z1Z3.1
#=GS R9M5G5_9FIRM/210-271      AC R9M5G5.1
#=GS E7GU87_CLOSY/802-864      AC E7GU87.1
#=GS A0A1I5VY04_9FIRM/554-616  AC A0A1I5VY04.1
R9IJC1_9FIRM/10-66                   e-GEMRRAWGGKLPEEFTQ.....QDMLAFMADTDLLLGGTVSAETLSAIHAAGYDY.MGGAVI.
U2CH59_9CLOT/10-66                   .DGQAHPAYFGKLPEEFTK.....EDTLRFLADTDIQLYRLLSADTHAALRAEGYEY.KNGGLI.
A0A1C0ADS7_9FIRM/890-951             .QEQQTPVFDKLPPEQQQAlsdtvQDTLQMLVDADKRIYGDVTGKTLEAIAAQGYSY.KDGQLE.
N1Z9H3_9CLOT/10-66                   e-GEMRRAWGGKLLEEFDQ.....RDMLAFMAETDLQLHGAVSAETLSAIHAAGYDY.TGGAVI.
H1BN19_9FIRM/796-858                 .QPDPDSVFSKLPPEQQQEmtasvKAMLQTLIEADLKSTGEVSQGTKEAAQAQGFTIaGDGTLE.
S2LAH6_9FIRM/793-855                 .QTNPDGVFSKLPPKQQQAmteevRATLQMLIDTDLKSTGEVSQGSKEAAQAQGFTIaGDGTLE.
A0A0S2W770_9FIRM/890-951             .QEQQTPVFDKLPPEQQQAlsdtvQDTLQMLVDADKRIYGDVTGKTLEAIAAQGYSY.KDGQLE.
A0A1Y4LDF5_9FIRM/906-967             .QAQQTPVFDKLSPEQQQAlsdtvKDTLQLLVDADKRIYGDVTGKTLEAIAAQGYSY.KDGQLE.
A0A143Y2M1_9FIRM/890-951             .QEQQTPVFDKLPPEQQQAlsdtvQDTLQMLVDADKRIYGDVTGKTLEAIAAQGYSY.KDGQLE.
C0EFU8_9FIRM/10-66                   e-GEMRRAWGGKLPEEFDQ.....RDMLAFMAETDLQLHGAVSAETLSAIHAAGYDY.EGGAVI.
E7GQ73_CLOSY/890-951                 .QEQQTPVFDKLPPEQQQAlsdtvQDTLQMLVDADKRIYGDVTGKTLEAIAAQGYSY.KDGQLE.
R9JCC7_9FIRM/15-71                   a-GQMRRTWNGKLPEEFNE.....RDMLLFAADTDLALYGRVSDETLNAARKAGYSY.ENGALM.
A0A1Y3Y256_9FIRM/890-951             .QEQQTPVFDKLPPEQQQAlsdtvQDTLQMLVDADKRIYGDVTGKTLEAIAAQGYSY.KDGQLE.
B9YBX0_9FIRM/561-623                 .QPAPDSVFSKLPPEQQQEmtdsvKAMLQTLIDADVKSTGEVTQGTLDAIQTQGFVLsGDGTLQ.
A0A1Y4NQA5_9FIRM/891-952             .QEQQTPVFDKLPPEQQQAlsdtvQDTLQMLVDADKRIYGDVTGKTLEAIAAQGYSY.KDGQLE.
C4ZEQ4_AGARV/10-66                   .DGQPNPAFYGKLPEEFSK.....ADTMRFMVETDLKLSGCVSADTLAALRAEGYDY.KDGNL-v
A0A1Y4EV43_9FIRM/805-867             .QPNQDSVFSKLPPEQQAAmteevRATLQALIDADLNATGQVSQGTKDAIQTQGFTLsDDGKLQ.
A0A1Y4RL54_9FIRM/890-951             .QEQQTPVFDKLPPEQQQAlsdtvQDTLQMLVDADKRIYGDVTGKTLEAIAAQGYSY.KDGQLE.
E2ZM36_9FIRM/10-66                   .DGQPHPAFYGKLPEEFSK.....ADTMRFMVETDLKLSGCVSADTLAALRAEGYDY.KDGNL-v
G9RVI4_9FIRM/554-616                 .QPDPDSVFSKLSPEQQQEmtasvKAMLQTLIDADLKSTGEVSQGTKEAAQAQGFTIvGDGTLE.
U2R1K1_9FIRM/891-952                 .QEQQTPVFDKLPPEQQQAlsdtvQDTLQMLVDADKRIYGDVTGKTLEAIAAQGYSY.KDGQLE.
V2YEN2_9FIRM/10-66                   .DGEMRRTWGGKLPEEFTR.....QDVLAFMADTDLLLSGNVSKETLAAIHAAGYDY.KGGAV-l
U2AJW9_9CLOT/907-968                 .QAQQTPVFDKLSPEQQQAlsdtvKDTLQLLVDADKRIYGDVTGKTLEAIAAQGYSY.KGGQLE.
A0A143X366_9FIRM/891-952             .QEQQTPVFDKLPPEQQQAlsdtvQDTLQMLVDADKRIYGDVTGKTLEAIAAQGYSY.KDGQLE.
R9LCU2_9FIRM/90-152                  .QPDPDSVFSKLPPEQQQEmtasvKAMLQTLIDADLKSTGEVSQGTKEAAQAQGFTIaGDGTLE.
C0EI13_9FIRM/11-67                   .DGSVQRLWNGKLVEDFTE.....ADTLRFMADTDIQLHGKVSADILAAIKKAGYRY.EGGEV-l
A0A1Y4TJP8_9FIRM/728-790             .QPAPDSVFSKLPPEQQQEmtdsvKSMLQTLIDADVKSTGEVTQGTLEAIQTQGFVLsGDGTLQ.
D6DKQ7_CLOSC/890-951                 .QEQQTPVFDKLPPEQQQAlsdtvQDTLQMLVDADKRIYGDVTGKTLEAIAAQGYSY.KDGQLE.
R9N325_9FIRM/15-71                   a-GQMRRTWNGKLPEEFNE.....RDMLLFAADTDLALYGRVSDETLNAARKAGYSY.ENGALM.
C0D7C8_9FIRM/591-647                 p-RQDGFLVGGKATGPMTE.....QDALLLMANLDKRLFGMVTMETLEAAEKAGCRF.TDGALS.
R9LJM8_9FIRM/10-66                   e-GEMRRAWGGKLPEEFTQ.....RDMLAFMAETDLQLQGTVSAETLSAIHAAGYDY.MGGAVI.
C0CYA6_9FIRM/906-967                 .QAQQTPVFDKLSPEQQQAlsdtvKDTLQLLVDADKRIYGDVTGKTLEAIAAQGYSY.KDGQLE.
E7GMB8_CLOSY/10-66                   .DGQPHPAFYGKLPEEFSK.....ADTMRFMVETDLKLSGCVSADTLAALRAEGYDY.KDGNL-v
F0Z1Z3_9CLOT/771-833                 .QTNPDGVFSKLPPKQQQAmteevRATLQMLIDTDLKSTGEVSQGSKEAAQAQGFTIaGDGTLE.
R9M5G5_9FIRM/210-271                 g-KEAAVLRYFAAPEQRQAisaevQATLQMLVDTDLKLYGEVTGDTLEAIQTQGFLL.RDGALI.
E7GU87_CLOSY/802-864                 .QPNPDGVFSKLPPEQQQAmtdevRAMLQMLIDTDLKITGEVSQGTKEAIQTQGFTLsKDGTLE.
A0A1I5VY04_9FIRM/554-616             .QPDPDSVFSKLSPEQQQEmtasvKAMLQTLIDADLKSTGEVSQGTKEAAQAQGFTIvGDGTLE.
#=GC seq_cons                        .Qsp.ssVFsKLsPEQQQthotpVpDsLQhLlDsDl+lhG-VoucTLEAIpAQGYoY.cDGpLp.
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