#=GF ID Lsm_C
#=GF AC PF14894.10
#=GF DE Lsm C-terminal
#=GF AU Eberhardt R;0000-0001-6152-1369
#=GF SE Jachkhmmer:Q8ZVU2
#=GF GA 27.00 27.00;
#=GF TC 32.30 29.70;
#=GF NC 25.00 20.40;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP Domain
#=GF RN [1]
#=GF RM 12668760
#=GF RT Structure and assembly of an augmented Sm-like archaeal protein
#=GF RT 14-mer.
#=GF RA Mura C, Phillips M, Kozhukhovsky A, Eisenberg D;
#=GF RL Proc Natl Acad Sci U S A. 2003;100:4539-4544.
#=GF DR INTERPRO; IPR028277;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC This domain is found at the C-terminus of archaeal Lsm (like-Sm)
#=GF CC proteins [1].
#=GF SQ 44
#=GS A0A031LLG6_9CREN/79-141 AC A0A031LLG6.1
#=GS A0A2T9WZJ4_9CREN/83-145 AC A0A2T9WZJ4.1
#=GS A0A2H5V2H6_9ARCH/78-139 AC A0A2H5V2H6.1
#=GS K0INX4_NITGG/73-136 AC K0INX4.1
#=GS A0A2T9WQK2_9CREN/80-142 AC A0A2T9WQK2.1
#=GS W7KIU3_9CREN/79-141 AC W7KIU3.1
#=GS A0A484IBH2_9ARCH/73-136 AC A0A484IBH2.1
#=GS F9VMU2_SULTO/78-140 AC F9VMU2.1
#=GS A0A5B9D6G7_9ARCH/82-143 AC A0A5B9D6G7.1
#=GS G4RLV2_THETK/81-140 AC G4RLV2.1
#=GS A0A0V8RTF1_PYROC/84-146 AC A0A0V8RTF1.1
#=GS A0A2T9X044_9CREN/80-142 AC A0A2T9X044.1
#=GS Q980L6_SACS2/79-141 AC Q980L6.1
#=GS Q8ZVU2_PYRAE/82-140 AC Q8ZVU2.1
#=GS H2C6Q1_9CREN/79-141 AC H2C6Q1.1
#=GS A4YJ07_METS5/79-141 AC A4YJ07.1
#=GS E6N696_CALS0/78-139 AC E6N696.1
#=GS A0A2H5UYB0_9ARCH/78-139 AC A0A2H5UYB0.1
#=GS A0A650CN05_9CREN/78-140 AC A0A650CN05.1
#=GS A0A2U9IEL8_9CREN/79-141 AC A0A2U9IEL8.1
#=GS D9Q078_ACIS3/83-145 AC D9Q078.1
#=GS A0A5B2Z2B2_9ARCH/73-136 AC A0A5B2Z2B2.1
#=GS I0A234_FERFK/78-140 AC I0A234.1
#=GS A0A557SSU9_9ARCH/73-136 AC A0A557SSU9.1
#=GS E1QV44_VULDI/81-139 AC E1QV44.1
#=GS F4B811_ACIHW/83-145 AC F4B811.1
#=GS A0A348B1C8_9CREN/79-141 AC A0A348B1C8.1
#=GS E0SPS7_IGNAA/80-142 AC E0SPS7.1
#=GS A0A2R4ZPB2_9CREN/83-145 AC A0A2R4ZPB2.1
#=GS I3TD69_THEC1/82-144 AC I3TD69.1
#=GS A3DMZ9_STAMF/82-144 AC A3DMZ9.1
#=GS A2BK21_HYPBU/84-146 AC A2BK21.1
#=GS A0A510DW43_9CREN/78-140 AC A0A510DW43.1
#=GS B8D654_DESA1/82-144 AC B8D654.1
#=GS L0AD38_CALLD/83-145 AC L0AD38.1
#=GS A0A4P2VDJ3_9ARCH/72-134 AC A0A4P2VDJ3.1
#=GS D5U347_THEAM/82-144 AC D5U347.1
#=GS A0A2U0S605_9ARCH/76-138 AC A0A2U0S605.1
#=GS A0A830GWE4_9CREN/68-127 AC A0A830GWE4.1
#=GS A0A6A8FIA8_9ARCH/73-136 AC A0A6A8FIA8.1
#=GS A0A6A7LDP2_9ARCH/73-136 AC A0A6A7LDP2.1
#=GS A0A060HMY4_9ARCH/137-200 AC A0A060HMY4.1
#=GS A8M9J8_CALMQ/80-139 AC A8M9J8.1
#=GS Q4JAY5_SULAC/79-141 AC Q4JAY5.1
A0A031LLG6_9CREN/79-141 ..v-REFASLLEKSLNLRT.GDIKLYEEAGFITI.LDNIKVSENGV.EGRGPLAQRINDIFDDYIAKKK....
A0A2T9WZJ4_9CREN/83-145 ...AKEFAEFIARFGNIDR.SQIKVFEDANVVEV.SRNIRVSKNGV.EGAGPLAQKVNTLYREYLRTK-g...
A0A2H5V2H6_9ARCH/78-139 .pd---LTSLFERINALFP.NMARYIREAGVIVV.MDRIRVTKDGViEGSGPAAERIQRIWEEW-----kret
K0INX4_NITGG/73-136 .pf--DFKALAERLSRVFP.GLVKIREDVGAIIV.MDKIKVTQSGVeEGSGLAADRVRSIYDEFMRE--tt..
A0A2T9WQK2_9CREN/80-142 ...PREFASFLEKTLGLRS.TDIKVYDEAGVVVV.LDKIKVTENGV.EGSGPMAQKVYDVFNDYVKRKK....
W7KIU3_9CREN/79-141 ..v-KEFADLVEKSLNLRP.GDVKVYEEAGVVTV.LEKIKVTEAGV.EGSGPLAQRVFDIYNEYVSKKR....
A0A484IBH2_9ARCH/73-136 .pf--DLKALSERLSRVFP.GLVKIREDVGAIIV.MDKIKVTESGIeEGSGLAATRVKAIYDEFLRES-k...
F9VMU2_SULTO/78-140 ...PKEFADLVTKELNLRA.GDAKVYEEAGVVVI.LDRIKVSENGV.EGSGPLAQRIYDLYNDYINKKK....
A0A5B9D6G7_9ARCH/82-143 pmd-----KLVERLRKILPdESIELHDDGGSIKLlGGKIIITESGV.EGRGPTHDRIKRLFDNFCA---em..
G4RLV2_THETK/81-140 ..l-RSFAKYAEKYF---P.GMVKYIEESNIVLI.GDKVRVSEIGI.EGSGPLAERVRQIYEEFVKKR-g...
A0A0V8RTF1_PYROC/84-146 ...PREFANYVARRLGLRP.DAIKVFQDAGVVVI.YNSIRVTANGV.EGAGPLAAKVSYVLREYIEAKK....
A0A2T9X044_9CREN/80-142 ...PREFASFLEKTLGLRS.TDIKVYDEAGVVVV.LDKIKVTENGV.EGSGPMAQKVYDVFNDYVKRKK....
Q980L6_SACS2/79-141 ...PREFAELVEKSLNLRP.ADIKVYDETSVVTI.LEKIKVSQNGV.EGSGPMAQRIYDLYNDYINKKK....
Q8ZVU2_PYRAE/82-140 ...MREFAKQAEKIF---P.GMVKYIEETNVVLI.GDKVRVSEIGV.EGVGPVAERAKRLFEEFLK---ry..
H2C6Q1_9CREN/79-141 ...AREFAEILQRNLSLRP.GDIKLYDDVGVITV.MEKIRVTESGV.EGTGPMAQRIYDLYNDYISKRK....
A4YJ07_METS5/79-141 ...AREFADVVQKNLGLRP.GDVKVYEEVGIITV.MERIKVSESGV.EGSGPMAQRIYDLYNEYIAKKK....
E6N696_CALS0/78-139 .pd---MSALVERLNRLFP.NLVVYHKESDTIVV.MDRIRVSREGV.FGEGPAAERVRKVYEEFMREQK....
A0A2H5UYB0_9ARCH/78-139 ..p--DLSQLVERLNRLFP.NLVTYLKESDTIVV.MDRIRVSREGV.VGEGPVAERVRKVYEDFMKE--mq..
A0A650CN05_9CREN/78-140 ...PREFAELVAKELNIRT.ADIKVYEEAGIVTI.LDKIKVSENGV.EGSGPLAQKVYDIYNSYVEKKK....
A0A2U9IEL8_9CREN/79-141 ..v-KEFADIIEHSLNLRP.GDVKVYEEAGVITV.LERIKVTEGGV.EGNGPLAQRIYDMYNDYMSKKR....
D9Q078_ACIS3/83-145 ...AKEFMEFLLRFGNIDR.SQVKVYEDANVVEV.SRTIRVSKNGV.EGSGPLAQKVNTLFREYLRTK-g...
A0A5B2Z2B2_9ARCH/73-136 pfn---LKALAERLSRVFP.GLVKIREDVGAIIV.MDKIKVTESGIeEGSGLSATRVKAIYDEFLRES-k...
I0A234_FERFK/78-140 ...PDEFARLIVSKLNIRE.ADIKTYPEAGVLVI.LNNIRVSDKGV.EGSGPLAHKIYGLYTEYIENKK....
A0A557SSU9_9ARCH/73-136 .pf--DLKALSERLSRVFP.GLVKIREDVGAIIV.MDKIKVTESGIeEGSGLSASRVKAIYDEFLRES-k...
E1QV44_VULDI/81-139 ..l-REFARYIDKYF---P.GMVKYIEEANVVQV.GN-VKVTTAGV.EGSGPLAKRVKELFDEFMSKRR....
F4B811_ACIHW/83-145 ..v-KEFASLIEKSLNLRP.GDIKVYEEAGVITV.LEKIKVTENGV.EGSGPLAQRIYDLFNEYVEKKK....
A0A348B1C8_9CREN/79-141 ..v-REFADMLEKNLSLRP.GDIKVYEGAQVVTV.MDKIKVSEAGV.EGNGPLAQRISDVFKDYMNKK-q...
E0SPS7_IGNAA/80-142 ...AEEFASLVISKLGLRP.DVVKVLSDTNSVII.YDRIKVTEAGV.EGTGSFAQRIYEIYTEYIESKK....
A0A2R4ZPB2_9CREN/83-145 ...PEEFFNLVVQRLNINP.ANVKVYKESGSVVI.LDRYRVSENGV.EGSGALANKIFDIWQEYMEGKK....
I3TD69_THEC1/82-144 ...PEEFKNIIIKEMKLPE.HLVKIIPEARVVEV.QGRYRVSERGV.EGTGPIAETLYRLLEQYLETRR....
A3DMZ9_STAMF/82-144 ...PNDFREYIIREMRLPE.HLVKIIPEARVVIV.QGRYKVSEKGV.EGTGPLAQTLYEFFQRYIEERK....
A2BK21_HYPBU/84-146 ...AREFADYIVRKLGLRP.DAVRVYEDAGVVVV.YNSIRVTANGV.EGAGTLAAKISYLLKEYLEAKR....
A0A510DW43_9CREN/78-140 ..v-KEFGQKLEKDLNLRP.GDVKIYEDVGILTV.MDRIKVSEVGV.EGTGPLAQRVYEIYNDYISKRK....
B8D654_DESA1/82-144 ...PEEFKEWVLREMKIPE.HMVKVIPEARVVEV.QGRYRVGEDGV.LGSGPIAETLHSIYKKYIEYRR....
L0AD38_CALLD/83-145 ...AKEFSEFLSRFGNIEK.HLIKVYDDINVVEV.GKSIKVSKDGV.EGSGPLAQKIYSIYREYLRTK-g...
A0A4P2VDJ3_9ARCH/72-134 .fd---LKELADRLSKSFP.GNVTFRDDIGAIFV.MNRIKVTTAGVvEGSGIAADKVRKIYEDYVRE--mr..
D5U347_THEAM/82-144 ...PEEFKDFLLHEMKIAE.HLVRVIPEARIVEV.QGRYRVSEKGV.EGVGPMAETLYSLWKKYIAVK-e...
A0A2U0S605_9ARCH/76-138 .pf--DLKALSERLEKVFP.TMVKLYEEQGFIWV.MEKIKVTEKGVtEGSGPIAERVQRVHSLFT----kea.
A0A830GWE4_9CREN/68-127 ..l-ADFAKELEKYF---P.GMIKYVEEANLIQV.GESVRVTQNGV.EGSGLTAKRVKELFDNYLKRR-q...
A0A6A8FIA8_9ARCH/73-136 .pf--DFKALSDRIARVFP.GLVKIREDVGAIIV.MDKIKVTQAGIeEGSGLAADRVKAIYEEFIRE--ik..
A0A6A7LDP2_9ARCH/73-136 .pf--DFKALSERLSKVFP.GLVRIREDVGAIIV.MDKIKVTETGIeEGSGLAADRVRVIYDEFMREN-r...
A0A060HMY4_9ARCH/137-200 .pf--DFKALAERLERAFP.GLVKIREDVGAIIV.MDKIKVTQSGVeEGTGLSADRVRSIFDAFMKETK....
A8M9J8_CALMQ/80-139 ..l-RELAKILEKYF---P.GMVKYIEETNTIIV.SENVTVTEEGV.KGTGLVARRVKEIYDEYVQSRK....
Q4JAY5_SULAC/79-141 ...PREFADVITKELNLRT.TDIKVYEEAGVVTI.LDRVKVTENGV.EGSGPLAQKVYDIFNSYIDKKK....
#=GC seq_cons ....cEFupll-+hhplhP.u.VKlh--uGllhV.h-+I+VoEsGV.EGoGPhApRlhclac-Ylcc+.....
//