GenomeNet

Database: Pfam
Entry: MSP1b
LinkDB: MSP1b
Original site: MSP1b 
#=GF ID   MSP1b
#=GF AC   PF03429.14
#=GF DE   Major surface protein 1B
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF SE   Pfam-B_4414 (release 6.6)
#=GF GA   25.00 25.00;
#=GF TC   32.70 62.20;
#=GF NC   24.50 23.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   11239934
#=GF RT   Differential adhesion of major surface proteins 1a and 1b of the
#=GF RT   ehrlichial cattle pathogen Anaplasma marginale to bovine
#=GF RT   erythrocytes and tick cells. 
#=GF RA   de la Fuente J, Garcia-Garcia JC, Blouin EF, Kocan KM; 
#=GF RL   Int J Parasitol 2001;31:145-153.
#=GF DR   INTERPRO; IPR005091;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   The major surface protein (MSP1) of the cattle pathogen
#=GF CC   Anaplasma is a heterodimer comprised of MSP1a and MSP1b.  This
#=GF CC   family is the MSP1b chain.  There MSP1 proteins are putative
#=GF CC   adhesins for bovine erythrocytes. 
#=GF SQ   8
#=GS B9KHR3_ANAMF/87-133   AC B9KHR3.1
#=GS B9KHR1_ANAMF/1-756    AC B9KHR1.1
#=GS B9KHR3_ANAMF/1-89     AC B9KHR3.1
#=GS B9KHL5_ANAMF/1-721    AC B9KHL5.1
#=GS B9KHL6_ANAMF/7-68     AC B9KHL6.1
#=GS B9KHM4_ANAMF/1-619    AC B9KHM4.1
#=GS B9KHL6_ANAMF/65-124   AC B9KHL6.1
#=GS B9KHL6_ANAMF/120-390  AC B9KHL6.1
B9KHR3_ANAMF/87-133              .....--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.-------AADYLHSNVEQATKDLMASEFAMMTFGGIMTCALLYIMSL--------------------------------------------------------------.....--------------------------------------------------------------------------------------------------------------------------------------------------------------.-----...----------------------------------------------------------------------------------------------------------------------------...----------gvlgaqq.....
B9KHR1_ANAMF/1-756               .....MTEDDKQQQQNQSDVVQAISAVFQRKSAELQRLNDFIKGADGTLKNVHPHMKSLEALSKQLSEKIAAEAAAKADAKYESVGLRAKAAAALGNLGRLVARGKLKSSDAPKDLDQSIDALPFMDEAPDTGEKIEVPAGEEQEFGKAAAWGLAGFKRTVDESLEMLDRGMHMLAEGQAQISQGIDAKDTALVREGLETSRLGAGLCRNGLVEASYGVGYANETMGKYAGKGLDKCKNKLDNACHKWSKALEEIESLRTAIDAKAEQQVEGEAWSPEGVSANTFYKGLHKIGTAIAVAAQATWEGLAMTGKFMGAVAKLAGAVSMCVAAYTAAIVGMAAATPATLLLTAMDNQS.VNNAVVKVSEYLHSNVEQATKDLMASEFAMMTFGGIMTCAKLMKGSFAAINQKFEEINATLTREATDIAQGVKETYQSIGDAFGNAFKSVGDAFKSIGDAFKSANDGIA.....KWTAALAGYASVEQLEEAKEADRVQAEQRAEAQAMTERVAGERAATVAAGTETIKTIVSDMRNELAKGHEQLQLVITDMCNELAQIGAFSQAERDALVKSFTPKPPARTTKELISHMHSGLESVMFRMARSLGIMSKASIEANSQDNSVEVAEISPET.QNMSD...AIPVEEAQIVETALLAAVNDTSKDDQAIVTDLINATIEVCTEQTNTLAGHTAEVQAGLEAAGIRFDDAQGLQEATPEAKGVEGINQEELEQAAEGLAAAVNEASADGKMQSLNQQETQIAQGEQ...QQQQSSGWSR............
B9KHR3_ANAMF/1-89                .....MAEDDKQQQQNQSNVVQAISAVFQRKSAELQRLNDFIKGADGTLKNVHPHMKSLEALSKQLSEKIAAEAAAKADAKYESVGLRAKAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.-------------------------------------------------------------------------------------------------------------.....--------------------------------------------------------------------------------------------------------------------------------------------------------------.-----...----------------------------------------------------------------------------------------------------------------------------...----------d...........
B9KHL5_ANAMF/1-721               .....MAEDDKQQQQNQSNVVQAISAVFQRKSAELARLNAFVEGTDGTLKNIHPQMKSLEALSQQLSEKIAAEAAAKADAKYESVGLRAKAAAALGSLGRLFRSGS-KGGYTPQD----IDALPFMDEAPDTGEKIEVPAGEEQEFGKAAAWGLAGFKRTVDESLEMLDRGMHMLAEGQAQISQGIADKSTALVREGLETSRLGAGLCRNGLVEASYGVSYANKTMGKYAGKGLEKCKNKLDDACHKWHDALNEIESLRTAIDAKAEQQVEGEAWSPEGVSANTFYRGLHKIGAAIAVAAQATWEGLAMTGKFMGAVAKLAGAVSMCVAAYTAAIAGV--ILPAGIPLAFMGPESkLAEYVDRAASYLHSNVEQATKDLMASEFAMMTFGGIMTCAKLMKGSFAAVNQKFEEINATLAREGTDIAQGIKETY------------------KSIGDAFKSVNTGIAkwttdKWTAALAGYASVEQLEEAKEADRAQAEQRAEAQAMTERVAQERAATVAAGTETIKTIVS------------------DMCNELAQICGLSQAERDALVQSFIPQPP-RTTKEIVSQMCNSVKSAFGSISHITNVIRQAGKDAQKIDPQVKVAEISPETiYAMSEalyALNMQESAAINNALLEAVNDSSKDDQAIVTDLINATIEVCTEQTNTLAGHTAEVQAGLEAAGIKLDDAH----TTPEAKGVEGINPEELAQAAEGLATAVNEASAEGKIQSLNQQESQIAQGGQhaaQQQSSSGWSR............
B9KHL6_ANAMF/7-68                lnrsl--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.-------------------------------------------------------------------------------------------------------------.....--------------------------------------------------------------------------------------------------------------------------------------------------------------.---SD..iTHESAETQIVETALLEAVNDSSKDDQAIVTDLINATIEVCTEQTNTLAGHTAEV----------------------------------------------------------------------...----------............
B9KHM4_ANAMF/1-619               .....------------------------------------------------------------------------------------------------------------------------MDEAPDTGEKIEVPAGEEQEFGKAAAWGLAGFKRTVDESLEMLDRGMHMLAEGQAQISQGIDAKDTALVREGLETSRLGAGLCRNGLVEASYGVGYANETMGKYAGKGLDKCKNKLDNACHKWSKALEEIESLRTAIDAKAEQQVEGEAWSPEGVSANTFYKGLHKIGTAIAVAAQATWEGLAMTGKFMGAVAKLAGAVSMCVAAYTAAIVGMAAATPATLLLTAMDNQS.VNNAVVKVSEYLHSNVEQATKDLMASEFAMMTFGGIMTCAKLMKGSFAAVNQKFEEINATLAREGTDIAQGIKETY-----------KSIGDAFKSIGDAFKSVNTGIAkwttdKWTAALAGYASVEQLEEAKEADRVQAEQRAEAQAMTERVAGERAATVAAGTETIKTIVSDMRNELAKGHEQLQLVITDMCNELAQIGAFSQAERDALVKSFTPKPPARTTKELISHMHSGLESVMFRMARSLGIMSKASIEANSQDNSVEVAEISPET.QNMSD...AIPVEEAQIVETALLAAVNDTSKDDQAIVTDLINATIEVCTEQTNTLAGHTAEVQAGLEAAGIKLDDAH----TTPEAKGVEGINQEELEQAAEGLAAAVNEASADGKMQFLKRE---------...----------adlrreshqgkv
B9KHL6_ANAMF/65-124              .....--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.-------------------------------------------------------------------------------------------------------------.....--------------------------------------------------------------------------------------------------------------------------------------------------------------.-----...-----------------------------------TAEVCTKQTNTLAEHTAEVQAGLEAAGIRFDDAQGLQEATPEAKGVEGINPEELEQAAQ------------------------------...----------a...........
B9KHL6_ANAMF/120-390             ....q-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAQATWEGLAMTGKFMGAVAKLAGAVSMCVAAYTAAIVGMAAATPATLLLTAMDNQS.VNNAVVKVSEYLHSNVEQATKDLMASEFAMMTFGGIMTCAKLMKGSFAAINQKFEEINATLTREATDIAQGVKETYQSIGDAFGNAFKSVGDAFKSIGDAFKSANDGIA.....KWTAALAGYASVEQLEEAKEADRVQAEQRAEAQAMTERVAGERAATVAAGTETIKTIVSDMRNELAKGHEQLQLVITDMCNELAQIGAFSQAAYTA--------------------------------------------------------------.-----...----------------------------------------------------------------------------------------------------------------------------...----------alvglwct....
#=GC seq_cons                    ...........................................................................................................................................................................................................................................................................................................................................................................supYLHSNVEQATKDLMASEFAMMTFGGIMTCAhLhhhSh.............................................................................................................................................................................................................................................................................ThEVCTcQTNTLAtHTAEV...................................................................................s...........
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