GenomeNet

Database: Pfam
Entry: OrfB_Zn_ribbon
LinkDB: OrfB_Zn_ribbon
Original site: OrfB_Zn_ribbon 
#=GF ID   OrfB_Zn_ribbon
#=GF AC   PF07282.12
#=GF DE   Putative transposase DNA-binding domain
#=GF PI   Transposase_35;
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Pfam-B_4755 (release 10.0)
#=GF GA   26.30 26.30;
#=GF TC   26.30 26.30;
#=GF NC   26.20 26.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR010095;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This putative domain is found at the C-terminus of a large
#=GF CC   number of transposase proteins.  This domain contains four
#=GF CC   conserved cysteines suggestive of a zinc binding domain.  Given
#=GF CC   the need for transposases to bind DNA as well as the large
#=GF CC   number of DNA-binding zinc fingers we hypothesise this domain is
#=GF CC   DNA-binding.
#=GF SQ   9778
#=GS D6U3G7_9CHLR/351-421        AC D6U3G7.1
#=GS A0A077LRL5_9PSED/31-100     AC A0A077LRL5.1
#=GS A0A1H8HU42_9ACTN/299-368    AC A0A1H8HU42.1
#=GS L9W0M1_9EURY/317-386        AC L9W0M1.1
#=GS A0A345E2F9_9EURY/276-342    AC A0A345E2F9.1
#=GS R9LVC7_9FIRM/306-376        AC R9LVC7.1
#=GS H2C8Z6_9CREN/136-202        AC H2C8Z6.1
#=GS L0ALB2_NATGS/316-380        AC L0ALB2.1
#=GS A0A031LKN4_9CREN/1-43       AC A0A031LKN4.1
#=GS D7CSR8_TRURR/291-360        AC D7CSR8.1
#=GS A0A2P8B4T3_9ACTN/159-228    AC A0A2P8B4T3.1
#=GS A0A218NMJ1_9ARCH/302-374    AC A0A218NMJ1.1
#=GS A0A2B7GXI3_9EURY/306-376    AC A0A2B7GXI3.1
#=GS A0A127ANU3_9DELT/302-371    AC A0A127ANU3.1
#=GS A0A143YPL5_9LACT/344-416    AC A0A143YPL5.1
#=GS D3D7U4_9ACTN/324-394        AC D3D7U4.1
#=GS D3D1W4_9ACTN/324-394        AC D3D1W4.1
#=GS N0AR87_9BACI/1-66           AC N0AR87.1
#=GS A0A238Z264_9ACTN/293-362    AC A0A238Z264.1
#=GS A0A0V7ZZI3_9CYAN/303-371    AC A0A0V7ZZI3.1
#=GS A0A1V4C560_9EURY/294-363    AC A0A1V4C560.1
#=GS R9N6R4_9FIRM/364-429        AC R9N6R4.1
#=GS D7E972_METEZ/299-373        AC D7E972.1
#=GS A0A0C2QJD9_9CYAN/288-358    AC A0A0C2QJD9.1
#=GS B1ZBC1_METPB/333-402        AC B1ZBC1.1
#=GS F9EMX9_FUSNU/5-86           AC F9EMX9.1
#=GS A0A1H6WWH1_9EURY/1-57       AC A0A1H6WWH1.1
#=GS A0A2T1C3K8_9CYAN/285-355    AC A0A2T1C3K8.1
#=GS D7EA58_METEZ/277-346        AC D7EA58.1
#=GS A0A089JVY7_9BACL/288-359    AC A0A089JVY7.1
#=GS C9ZDG1_STRSW/8-77           AC C9ZDG1.1
#=GS A0A1M4X2R7_9BURK/267-341    AC A0A1M4X2R7.1
#=GS Q8YV13_NOSS1/290-359        AC Q8YV13.1
#=GS B7K4E3_RIPO1/291-361        AC B7K4E3.1
#=GS Q899Z7_CLOTE/304-369        AC Q899Z7.1
#=GS A0A410PRK2_9CLOT/311-381    AC A0A410PRK2.1
#=GS A0A2G5HNA8_9ACTN/184-253    AC A0A2G5HNA8.1
#=GS G4E611_9GAMM/291-361        AC G4E611.1
#=GS A0A1B1ME59_STRLN/345-416    AC A0A1B1ME59.1
#=GS L9XE59_9EURY/315-384        AC L9XE59.1
#=GS A0A1M6XSS8_9BACL/300-370    AC A0A1M6XSS8.1
#=GS A1VNB5_POLNA/277-346        AC A1VNB5.1
#=GS G7WR94_METH6/277-346        AC G7WR94.1
#=GS A0A1H8D5D5_9BACI/183-247    AC A0A1H8D5D5.1
#=GS A0A031LUU1_9CREN/318-385    AC A0A031LUU1.1
#=GS Q5NXE4_AROAE/1-25           AC Q5NXE4.1
#=GS U1PXJ0_9EURY/19-88          AC U1PXJ0.1
#=GS A0A1D8TA97_9NOCA/331-400    AC A0A1D8TA97.1
#=GS A0A0Q3TMY2_9BACI/299-369    AC A0A0Q3TMY2.1
#=GS K9YV07_DACSA/285-355        AC K9YV07.1
#=GS A0A1N6HG09_9PROT/309-378    AC A0A1N6HG09.1
#=GS A0A1M4V136_9CLOT/403-472    AC A0A1M4V136.1
#=GS Q2JJU4_SYNJB/293-365        AC Q2JJU4.1
#=GS A0A1M5Y3T5_9CLOT/12-82      AC A0A1M5Y3T5.1
#=GS A0A0X3BJX4_9EURY/290-360    AC A0A0X3BJX4.1
#=GS G0QDJ2_NANSJ/302-370        AC G0QDJ2.1
#=GS A0A1H3B508_9PSEU/350-414    AC A0A1H3B508.1
#=GS T0NV45_PHOTE/245-314        AC T0NV45.1
#=GS G2SQB0_LACRR/210-276        AC G2SQB0.1
#=GS A0A109QJ76_9BACL/267-332    AC A0A109QJ76.1
#=GS K9YQ59_DACSA/287-357        AC K9YQ59.1
#=GS A0A397JN54_9GLOM/462-529    AC A0A397JN54.1
#=GS A0A1V4C9F8_9EURY/299-368    AC A0A1V4C9F8.1
#=GS B4EVM6_PROMH/304-373        AC B4EVM6.1
#=GS A0A2P4UQ12_9ACTN/302-367    AC A0A2P4UQ12.1
#=GS A0A1X2GF82_9FUNG/54-123     AC A0A1X2GF82.1
#=GS K4MBD8_9EURY/277-322        AC K4MBD8.1
#=GS K9UUF2_9CYAN/291-361        AC K9UUF2.1
#=GS A0A0J1G525_9FIRM/141-211    AC A0A0J1G525.1
#=GS A4F7N9_SACEN/289-359        AC A4F7N9.1
#=GS H2C980_9CREN/299-365        AC H2C980.1
#=GS U1MYR4_9EURY/295-362        AC U1MYR4.1
#=GS A0A1M5B364_9THEO/127-199    AC A0A1M5B364.1
#=GS F6ERC1_HOYSD/360-435        AC F6ERC1.1
#=GS A0A2T5R4S3_9DELT/304-372    AC A0A2T5R4S3.1
#=GS D7AZZ4_NOCDD/316-385        AC D7AZZ4.1
#=GS M9LMC1_PAEPP/1-35           AC M9LMC1.1
#=GS A0A1Y2GM47_9FUNG/326-395    AC A0A1Y2GM47.1
#=GS A0A1H4APQ5_9GAMM/292-364    AC A0A1H4APQ5.1
#=GS A0YXC0_LYNSP/25-91          AC A0YXC0.1
#=GS A0A0M8UUV6_9ACTN/335-406    AC A0A0M8UUV6.1
#=GS I0INY8_LEPFC/125-194        AC I0INY8.1
#=GS A0A1X1QQW4_9GAMM/65-126     AC A0A1X1QQW4.1
#=GS U1PCI4_9EURY/1-45           AC U1PCI4.1
#=GS A0A1H6QUK7_9GAMM/194-264    AC A0A1H6QUK7.1
#=GS A0A094WH11_BACAO/140-210    AC A0A094WH11.1
#=GS Q97XP1_SACS2/300-369        AC Q97XP1.1
#=GS F4B5R6_ACIHW/298-364        AC F4B5R6.1
#=GS A0A401G1N7_9DELT/314-381    AC A0A401G1N7.1
#=GS A0A1V2RKJ3_9ACTN/316-385    AC A0A1V2RKJ3.1
#=GS A0A1M5DJI6_9BURK/138-201    AC A0A1M5DJI6.1
#=GS D6TFH8_9CHLR/317-387        AC D6TFH8.1
#=GS F8KQN5_HELBC/283-348        AC F8KQN5.1
#=GS S6CZ37_9EURY/294-364        AC S6CZ37.1
#=GS A0A081NIV1_9GAMM/13-83      AC A0A081NIV1.1
#=GS A0A3Q9HP75_9FIRM/289-355    AC A0A3Q9HP75.1
#=GS A0A3A9FVF1_9BACT/371-446    AC A0A3A9FVF1.1
#=GS H2C4Z0_9CREN/233-298        AC H2C4Z0.1
#=GS A0A235GAZ4_9NOCA/295-364    AC A0A235GAZ4.1
#=GS A0A3R5U4C5_9CLOT/307-377    AC A0A3R5U4C5.1
#=GS A0A1Y3W8U4_9FIRM/290-361    AC A0A1Y3W8U4.1
#=GS A0A447FTI3_9LACO/310-379    AC A0A447FTI3.1
#=GS A0A2Z2NIM9_9GAMM/306-375    AC A0A2Z2NIM9.1
#=GS C6HUC1_9BACT/26-95          AC C6HUC1.1
#=GS A0A368U6V2_9GAMM/84-152     AC A0A368U6V2.1
#=GS A0A3D8JYH1_9BURK/305-374    AC A0A3D8JYH1.1
#=GS K9T8N8_9CYAN/273-342        AC K9T8N8.1
#=GS A9B2W9_HERA2/290-359        AC A9B2W9.1
#=GS A0A1V9A828_9PSEU/314-383    AC A0A1V9A828.1
#=GS A0A1Q1FPH7_9EURY/302-371    AC A0A1Q1FPH7.1
#=GS A0A433RRP2_9BACL/302-372    AC A0A433RRP2.1
#=GS A0A0N1G2Q1_9ACTN/308-377    AC A0A0N1G2Q1.1
#=GS A0YT00_LYNSP/16-80          AC A0YT00.1
#=GS B0JFH0_MICAN/16-86          AC B0JFH0.1
#=GS Q5JD72_THEKO/314-383        AC Q5JD72.1
#=GS A0A0E4HDU6_9BACL/286-357    AC A0A0E4HDU6.1
#=GS A0A1G9JNK4_9ACTN/16-85      AC A0A1G9JNK4.1
#=GS A0A140LDX2_9THEO/298-367    AC A0A140LDX2.1
#=GS A0A218NMP0_9ARCH/296-368    AC A0A218NMP0.1
#=GS A0A1H0E4U1_9BACI/289-360    AC A0A1H0E4U1.1
#=GS A0A143Y2B8_9LACT/344-416    AC A0A143Y2B8.1
#=GS D5BXG9_NITHN/280-353        AC D5BXG9.1
#=GS A0A346A628_9CAUD/545-618    AC A0A346A628.1
#=GS A0A2N0ILT0_9ACTN/296-365    AC A0A2N0ILT0.1
#=GS A0A367FR85_9ACTN/279-348    AC A0A367FR85.1
#=GS A0A2D0HCB2_9NOSO/292-359    AC A0A2D0HCB2.1
#=GS A0A1X7DBY1_9ACTN/309-378    AC A0A1X7DBY1.1
#=GS A0A1E7JXS5_9ACTN/292-362    AC A0A1E7JXS5.1
#=GS Q250D2_DESHY/317-382        AC Q250D2.1
#=GS A8ZLD5_ACAM1/188-258        AC A8ZLD5.1
#=GS A0A127ASI0_9DELT/325-394    AC A0A127ASI0.1
#=GS A0A143YXY0_9LACT/294-362    AC A0A143YXY0.1
#=GS A0A0C1TVH4_9CLOT/303-372    AC A0A0C1TVH4.1
#=GS A0A2T1FX59_9CYAN/306-374    AC A0A2T1FX59.1
#=GS A0A0D6XQ03_9STAP/15-85      AC A0A0D6XQ03.1
#=GS S3BF66_9BURK/340-411        AC S3BF66.1
#=GS D3SR30_NATMM/306-376        AC D3SR30.1
#=GS A0A0A1N7H9_RHIZD/493-562    AC A0A0A1N7H9.1
#=GS A0A317JTU8_9ACTN/354-417    AC A0A317JTU8.1
#=GS C9RCM8_AMMDK/329-398        AC C9RCM8.1
#=GS A0YWS5_LYNSP/218-289        AC A0YWS5.1
#=GS B0JV64_MICAN/290-342        AC B0JV64.1
#=GS A0A418LV39_9FIRM/1-46       AC A0A418LV39.1
#=GS A0A0F0H361_NOCAE/11-80      AC A0A0F0H361.1
#=GS A1RR41_PYRIL/333-393        AC A1RR41.1
#=GS F4BV13_METSG/154-219        AC F4BV13.1
#=GS G0V4F7_9CLOT/27-98          AC G0V4F7.1
#=GS A0A2T0B101_9CLOT/303-373    AC A0A2T0B101.1
#=GS A0A256J7W1_9EURY/292-360    AC A0A256J7W1.1
#=GS D6TS38_9CHLR/351-421        AC D6TS38.1
#=GS K9VF21_9CYAN/292-359        AC K9VF21.1
#=GS S1QV71_9ENTE/302-372        AC S1QV71.1
#=GS A0A1Y2GBV6_9FUNG/356-425    AC A0A1Y2GBV6.1
#=GS A0A418Y5E4_9BURK/262-331    AC A0A418Y5E4.1
#=GS A0A1H2SNE3_9FIRM/300-370    AC A0A1H2SNE3.1
#=GS N9W9C1_9CLOT/1-66           AC N9W9C1.1
#=GS A0A1H0BMJ1_9EURY/294-363    AC A0A1H0BMJ1.1
#=GS A1VIC7_POLNA/134-182        AC A1VIC7.1
#=GS A0A077LPF6_9PSED/286-355    AC A0A077LPF6.1
#=GS A0A1H2BQ15_9ACTN/294-364    AC A0A1H2BQ15.1
#=GS A0A368U8N9_9GAMM/289-360    AC A0A368U8N9.1
#=GS D6TXL6_9CHLR/284-359        AC D6TXL6.1
#=GS A0A060HLM2_9ARCH/286-342    AC A0A060HLM2.1
#=GS A0A0M9YV56_9ACTN/316-385    AC A0A0M9YV56.1
#=GS G4L929_TETHN/303-372        AC G4L929.1
#=GS A0A0C2LPV5_9CYAN/305-375    AC A0A0C2LPV5.1
#=GS A0A0M8XYK7_9ACTN/317-386    AC A0A0M8XYK7.1
#=GS K9YLR7_CYASC/291-358        AC K9YLR7.1
#=GS C6HWZ0_9BACT/304-373        AC C6HWZ0.1
#=GS A0A239UF09_9STAP/293-362    AC A0A239UF09.1
#=GS A0A1M6JSN5_9CLOT/1-51       AC A0A1M6JSN5.1
#=GS W6LRJ3_9GAMM/1-39           AC W6LRJ3.1
#=GS A0A218QCA2_9CYAN/289-359    AC A0A218QCA2.1
#=GS L0JVF0_9EURY/293-361        AC L0JVF0.1
#=GS V6DY92_9EURY/147-203        AC V6DY92.1
#=GS K6E7Q3_9BACI/14-94          AC K6E7Q3.1
#=GS Q18H82_HALWD/317-386        AC Q18H82.1
#=GS A0A2G4F176_9CYAN/317-387    AC A0A2G4F176.1
#=GS A0YLI7_LYNSP/1-68           AC A0YLI7.1
#=GS M0CG41_9EURY/167-229        AC M0CG41.1
#=GS A0A317K803_9ACTN/297-366    AC A0A317K803.1
#=GS A0A1Q2KUV3_9BACL/302-372    AC A0A1Q2KUV3.1
#=GS A0A0M2JRJ6_9MYCO/341-412    AC A0A0M2JRJ6.1
#=GS A0A1E5QHB3_9CYAN/290-360    AC A0A1E5QHB3.1
#=GS B1L573_KORCO/289-355        AC B1L573.1
#=GS A0A380BDQ5_SPOPA/381-462    AC A0A380BDQ5.1
#=GS A0A1H9XVE0_9ACTN/301-350    AC A0A1H9XVE0.1
#=GS A0A261F8P7_9BIFI/167-237    AC A0A261F8P7.1
#=GS A0A3R7J7W2_9ACTN/315-384    AC A0A3R7J7W2.1
#=GS A0A1M5S373_9ACTN/300-369    AC A0A1M5S373.1
#=GS A0A1Q6DW31_9EURY/152-216    AC A0A1Q6DW31.1
#=GS W6TVZ5_9SPIR/105-162        AC W6TVZ5.1
#=GS Q751H0_ASHGO/383-451        AC Q751H0.1
#=GS A0A1I3VGN2_9BACL/291-358    AC A0A1I3VGN2.1
#=GS A0A0X1KQ79_9THEM/302-368    AC A0A0X1KQ79.1
#=GS I0JLH0_HALH3/289-360        AC I0JLH0.1
#=GS A0A143YVF5_9LACT/301-372    AC A0A143YVF5.1
#=GS A0A3N1AXC1_9ACTN/300-369    AC A0A3N1AXC1.1
#=GS A0A1Q1FPQ2_9EURY/297-366    AC A0A1Q1FPQ2.1
#=GS G6FQA0_9CYAN/219-287        AC G6FQA0.1
#=GS A0A2P8AP45_9ACTN/288-358    AC A0A2P8AP45.1
#=GS A0A0C4WNV0_9GAMM/288-358    AC A0A0C4WNV0.1
#=GS Q46GK6_METBF/290-360        AC Q46GK6.1
#=GS K4LFZ7_THEPS/50-119         AC K4LFZ7.1
#=GS A0A0R2AD68_9LACO/316-386    AC A0A0R2AD68.1
#=GS A0A2N5N208_9BACL/289-360    AC A0A2N5N208.1
#=GS A0A498G135_9EURY/298-366    AC A0A498G135.1
#=GS A0A2T1CDT7_9CYAN/305-373    AC A0A2T1CDT7.1
#=GS V5AAT9_9ARCH/309-378        AC V5AAT9.1
#=GS K7A413_9ALTE/87-156         AC K7A413.1
#=GS M0L7Y7_9EURY/198-266        AC M0L7Y7.1
#=GS H2C0E5_9CREN/206-257        AC H2C0E5.1
#=GS F4XQP7_9CYAN/310-378        AC F4XQP7.1
#=GS A0A077LJX0_9PSED/286-355    AC A0A077LJX0.1
#=GS K9WYE8_9NOST/291-361        AC K9WYE8.1
#=GS A0A418Y566_9BURK/262-336    AC A0A418Y566.1
#=GS Q5KZF5_GEOKA/278-345        AC Q5KZF5.1
#=GS A0A261TM38_9BORD/291-361    AC A0A261TM38.1
#=GS A0A368N328_9EURY/309-378    AC A0A368N328.1
#=GS A0A370B498_9ACTN/325-394    AC A0A370B498.1
#=GS L0JUJ5_NATP1/312-379        AC L0JUJ5.1
#=GS A0A0C2QN30_9CYAN/309-378    AC A0A0C2QN30.1
#=GS A0A1C6T0N4_9ACTN/346-416    AC A0A1C6T0N4.1
#=GS A0A1U7P456_9DEIO/228-299    AC A0A1U7P456.1
#=GS A0A1Q4RK60_9CYAN/153-221    AC A0A1Q4RK60.1
#=GS C6HV42_9BACT/40-109         AC C6HV42.1
#=GS A0A0G3AB29_9ACTN/296-365    AC A0A0G3AB29.1
#=GS A0A2G4EZT4_9CYAN/285-355    AC A0A2G4EZT4.1
#=GS A0A386HQX4_9BACT/294-363    AC A0A386HQX4.1
#=GS D2RKC6_ACIFV/292-363        AC D2RKC6.1
#=GS A0A1Y2H1H4_9FUNG/47-116     AC A0A1Y2H1H4.1
#=GS A0A1Z4NM78_9CYAN/290-360    AC A0A1Z4NM78.1
#=GS A0A2T1LTJ0_9CHRO/290-351    AC A0A2T1LTJ0.1
#=GS A0A089L700_9BACL/284-355    AC A0A089L700.1
#=GS A0YYY0_LYNSP/547-621        AC A0YYY0.1
#=GS K9XSG4_STAC7/289-358        AC K9XSG4.1
#=GS A0A2S4YRN7_9ACTN/311-382    AC A0A2S4YRN7.1
#=GS J0L2J7_9HELI/288-353        AC J0L2J7.1
#=GS B7JU91_RIPO1/306-375        AC B7JU91.1
#=GS A0A1I7H6K5_9CLOT/1-48       AC A0A1I7H6K5.1
#=GS Q9HM87_HALSA/324-393        AC Q9HM87.1
#=GS A0A3N6LUF5_9EURY/95-165     AC A0A3N6LUF5.1
#=GS A0A1Y4C281_9FIRM/301-370    AC A0A1Y4C281.1
#=GS K0I8V4_NITGG/274-338        AC K0I8V4.1
#=GS A0A0X1KSF4_9THEM/302-368    AC A0A0X1KSF4.1
#=GS A0A1Q5GIY6_9ACTN/296-366    AC A0A1Q5GIY6.1
#=GS K2PQQ6_9FLAO/45-92          AC K2PQQ6.1
#=GS A0A197JXL7_9FUNG/87-154     AC A0A197JXL7.1
#=GS K9XSS8_STAC7/289-358        AC K9XSS8.1
#=GS A0A367QL85_9NOSO/285-354    AC A0A367QL85.1
#=GS A0A031LSH9_9CREN/1-64       AC A0A031LSH9.1
#=GS D5E8L0_METMS/294-362        AC D5E8L0.1
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