GenomeNet

Database: Pfam
Entry: PAS_12
LinkDB: PAS_12
Original site: PAS_12 
#=GF ID   PAS_12
#=GF AC   PF18095.2
#=GF DE   UPF0242 C-terminal PAS-like domain
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Bateman A
#=GF GA   22.60 22.60;
#=GF TC   22.60 22.60;
#=GF NC   22.50 22.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   PAS domain
#=GF DR   INTERPRO; IPR040578;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is found at the C-terminus of proteins of the
#=GF CC   UPF0242 family. This domain is related to the PAS domain
#=GF CC   Pfam:PF13426.
#=GF SQ   13
#=GS A0A090E0C4_9BACT/251-403  AC A0A090E0C4.1
#=GS A0A0U5JAE2_9BACT/289-441  AC A0A0U5JAE2.1
#=GS Q6MEU1_PARUW/282-434      AC Q6MEU1.1
#=GS Y616_CHLTR/266-417        AC O84621.1
#=GS A0A078L755_9CHLA/230-382  AC A0A078L755.1
#=GS D6YT85_WADCW/230-381      AC D6YT85.1
#=GS S7J4B1_9CHLA/243-394      AC S7J4B1.1
#=GS A0A0C1JYI3_9BACT/222-374  AC A0A0C1JYI3.1
#=GS A0A0H5DSR8_9BACT/251-402  AC A0A0H5DSR8.1
#=GS F8L247_PARAV/249-401      AC F8L247.1
#=GS A0A0E2IWR4_CHLPS/242-393  AC A0A0E2IWR4.1
#=GS A0A3S0INP5_9FLAO/65-169   AC A0A3S0INP5.1
#=GS A0A1T5KQ33_9BACT/13-118   AC A0A1T5KQ33.1
A0A090E0C4_9BACT/251-403             .......................................t-EDEAKKLLKRCLDIA.QKITV..SHHFTNE..KSRFR...DLPF...DNHGL.DLRRLCDSLRSETTG..AVLVYSQ..KENR..ILFINNQIRALLGFGPDKFV..Q.D.F.E...N..I....V..Q.GGL..N.E....W..K.SAIAKMN.T....L.YE..A...EA.SLVMK..NKAGQ..DV..LLRCQLGLI.PTGVFRNSAIGVFYN.........................................................
A0A0U5JAE2_9BACT/289-441             .......................................s-IPEATILLKKCITMA.QKLTG..ANYYSNE..ATRYR...EFSS...SNYAI.DQRRLFDGLRNEEGG..LIVVYSQ..KEHK..LLFANHQSKALLGWSPDKFT..S.D.F.S...S..I....I..Q.EGL..A.D....W..K.RGLNTLS.S....A.TE..S...QI.RLLAK..NKNGQ..EI..LLSCHLGIV.PSGLFRNYIIGVLYP.........................................................
Q6MEU1_PARUW/282-434                 .......................................t-TIEASALLKKCINMA.QKMTG..ANYYNNE..TTRYR...EFST...SNYAI.DQRRLFDNLKNEEGG..LIVVFSQ..KDQK..LLFANQQSKALLGWSADKLI..S.D.F.A...Q..I....I..Q.EGL..N.E....W..R.RGLAALT.T....A.AE..S...QI.RLLAK..NKNGQ..EV..LLSCQLGII.PSGLFRSYVIAIFYP.........................................................
Y616_CHLTR/266-417                   .......................................v-VAQLVLEFRKIVFRV.ETTEA..ADSLTAL..RYTRT...DPSA...HNYSL.ACRQLFDGLREENLG..MLFIYAP..FAQR..VLFANALFNDWTGYGLEDFL..N.R.E.S...D..V....V..L.EGF..A.Q....W..E.RDL-LTE.S....R.VE..R...SG.KIVIK..TKAFG..AT..PFYYCVVTL.DKGPFAQHILGVLYP.........................................................
A0A078L755_9CHLA/230-382             ........................................SWEDASIQLKRCMELA.QKQSS..SNQFYAN..NYLYK...ESSL...DSFAL.DLRTLFDNLRNENNA..SILFFAP..KENK..VLFANPPLRKVLGLNHEKIS..Q.H.F.F...D..C....L..D.PSL..E.K....W..N.KAIAQLT.L....K.NE..V...KT.TFEFK..TKHND..KI..YLNALVGVI.PSGIFRNQVIIIFFE.........................................................
D6YT85_WADCW/230-381                 .......................................s-PEEASVLLGRCINIA.QKITT..SNRF-NS..NSRFH...HMPL...DSSAL.DFRRLYDSLRSETSS..GIIVYSL..KENR..LIFANDQIEMIMGWNSETFT..R.N.F.S...E..I....I..R.EGY..E.E....W..N.AALGQLS.P....H.TE..S...KA.RMLFK..TKNGQ..NI..LINCHLKII.PTGIFRHYVIGTLYP.........................................................
S7J4B1_9CHLA/243-394                 .....................................nss---QLLLELKKIAFKV.ENAGA..TTSLTAS..RYLHT...DTGI...QNYSL.ECRQLFENLREENLG..MIFIYSK..KSRR..HVFANSLFKTWTGHSVEDFL..N.T.N.E...G..V....V..V.SGI..E.Q....W..E.TDL-YLH.G....R.QE..S...LG.KVVVN..TRLYG..HI..PFHYCLTTL.NKGPLHNHVLGVLYP.........................................................
A0A0C1JYI3_9BACT/222-374             ......................................ns--MQANIQLKRCIDIA.QKITG..ASHYYNT..SSRFK...DLAV...DNYTL.DLRRLFDSLRAENAS..AIIFYSQ..KENK..ILFVNNQSRSLLGWSPDKFV..Q.S.F.N...E..I....V..E.PSK..D.I....W..R.QGIASLA.I....K.ND..N...HI.SLKMK..SKAGA..QV..EVHALLGII.PTGIFRYHVLGILY-s........................................................
A0A0H5DSR8_9BACT/251-402             ......................................nl--EDAKKQLRRCLDIA.QKITG..SHYIRGQ..AARFR...DMA-...DHYAL.DLRRLCDSLRSENGA..AVIVYSP..RENR..LLFINNHVKTILGYSPEKFV..Q.D.F.E...S..I....V..Q.EGM..G.D....W..K.KVVGQLS.T....L.HE..A...KT.SLVMK..NKNNE..DV..VVQCLLGMI.PTGVFKSHVMGVLY-h........................................................
F8L247_PARAV/249-401                 .......................................h-AEGASHQLKQCIEIV.QNITG..VNHFSSQ..SSLFR...DLPV...NSNAL.DLRRLGDSLGSENMA..ALAVYSK..KEHK..LLYANHQIRHLLGWSSDKFL..Q.D.F.P...E..I....V..Q.DGL..A.E....W..K.TQIQGLS.S....S.HE..A...KI.RLVMK..TKFGE..NL..LLNCHLGLI.PSGIFCNHVIAVFYP.........................................................
A0A0E2IWR4_CHLPS/242-393             ......................................lp--KQLLSELKKIAFKM.ENIEV..ASSLTAS..RYIRS...ESSV...HNYSL.ECRQLFDSLREENLG..MLFVYTP..QSQR..AVFANSLFKTWTGYGVEDFL..K.M.D.E...D..V....V..V.SGL..P.Q....W..E.ADL-RLY.D....R.KE..R...SG.KIIIK..TKNHG..QI..PFYYCLTVL.NKGPLHNHVLGVLYP.........................................................
A0A3S0INP5_9FLAO/65-169              ...........................dnifaltdqmvfi----------------.-----..-------..-----...----...-----.---------------..-----LN..RSYR..ILQTNNSVKRFLQFKQRDIL..H.NeF.E...Q..L....L.sA.DSL..K.N....W..R.ETVEKLE.E....Q.QE..Q...EA.RLRLS..FKTEK..GL..LLPADCKLI.---------------ffrgngvlqdkilv...........................................
A0A1T5KQ33_9BACT/13-118              ................................digdisvd----------------.-----..-------..-----...----...-----.---------------..GIFVYSL..HENK..VTYCNHMLSEIFGTTMENII..D.R.P.I...E..V....L..K.EAL..N.YdsnyL..E.EILQQLQ.S....K.YT..L...SN.VQMLI..NAAGK..SK..YLTADIYYIeDSGV-----------vmsiikdi.................................................
#=GC seq_cons                        .......................................s...pAph.LK+Clphs.Qphou..usphpsp..p.ha+...-huh...ssauL.DhRpLaDuLRsEshu..hlhVYS...KEp+..lLFANsph+slLGaus-cFl..p.c.F.p...p..l....l..p.-GL..s.p....W..c.psltpLs.s....p.pE..s...ps.+llhK..sKssp..pl..hlpspLslI.PoGlF+saVlGlhYs.........................................................
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