GenomeNet

Database: Pfam
Entry: PBP_N
LinkDB: PBP_N
Original site: PBP_N 
#=GF ID   PBP_N
#=GF AC   PF17093.6
#=GF DE   Penicillin-binding protein N-terminus
#=GF AU   Eberhardt R;0000-0001-6152-1369
#=GF SE   Jackhmmer:Q9A3C7
#=GF GA   30.00 30.00;
#=GF TC   38.80 38.80;
#=GF NC   27.40 26.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR031375;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This domain occurs at the N-terminus of some penicillin-binding
#=GF CC   proteins in Caulobacter species.
#=GF SQ   9
#=GS B0SW02_CAUSK/1-115      AC B0SW02.1
#=GS A0A2R7LFA2_9CAUL/5-121  AC A0A2R7LFA2.1
#=GS A0A0V2FFR3_CAUVI/1-118  AC A0A0V2FFR3.1
#=GS Q9A3C7_CAUVC/1-138      AC Q9A3C7.1
#=GS A0A0H3CES2_CAUVN/1-138  AC A0A0H3CES2.1
#=GS A0A426GE49_9CAUL/1-141  AC A0A426GE49.1
#=GS A0A257J7E7_9PROT/2-122  AC A0A257J7E7.1
#=GS A0A2D2AVU7_9CAUL/4-131  AC A0A2D2AVU7.1
#=GS A0A2R7RQ79_9PSED/1-104  AC A0A2R7RQ79.1
B0SW02_CAUSK/1-115                 ...MNDWTLPPYRFDDKATGSAPARP-P--EFGSAP-------.-P..PP-------..-PPEPPRKP....EPEEPFRADLKHARARR----GRWIWWTLAV...VVLLGLATAASGAGYVWWKYLRDTPALPSREALFAVNRAPGVRFEDR
A0A2R7LFA2_9CAUL/5-121             ...VNDWTLPPYRFDDEPQPA--PRP--QTAFGAPP-------.-P..PP-------..EDPRPPE--....EPREPFRADLAHQKARKRARRSGWILGLVLG...GLLLGIIAAGSTAGYVWWKYLRDTPQLPSRESLFAVNRAPGIRFEDK
A0A0V2FFR3_CAUVI/1-118             ...MNDWTLPPYKFDDP-----PARPKP-PAGGG-----FAPV.PP..PP------P..EPPKGPPDR....PPEEPFRADLKTPRKRG---GWGWVWITLLV...SALVGFLAVGGAGAYVWFKYLKDTPELPSREALFAVNRAPGVRFEDR
Q9A3C7_CAUVC/1-138                 ...MNDWTLPPYKFDDGKSPGEPPKPGPASASDGVSQDPWAPQ.GP..DPFRLSSDA..ATPPPPPEP....PPEEPFRADLKHAAAKKKARKWGWVWGTLLV...GFLLAVLSVAGGGAYVWFKYLKDTPALPSREALFAVNRAPGIRFEDR
A0A0H3CES2_CAUVN/1-138             ...MNDWTLPPYKFDDGKSPGEPPKPGPASASDGVSQDPWAPQ.GP..DPFRLSSDA..ATPPPPPEP....PPEEPFRADLKHAAAKKKARKWGWVWGTLLV...GFLLAVLSVAGGGAYVWFKYLKDTPALPSREALFAVNRAPGIRFEDR
A0A426GE49_9CAUL/1-141             ...MNDWTLPPYKFDDKDPSKRRPEP-AVGAPPEPPHDPWAQP.EPlrDPFQLSPPPppSHQPPPPPP....PPEEPFRADLQHRAAKKKARKWGWIWGVLLV...SFLVGVLAAGGGAAYVWQKYLKDTPPLPSRSALFAVNRAPGIRFEDR
A0A257J7E7_9PROT/2-122             ted----------------PDQPPKRST-DASQGSGEGAADGQvGP..AE-TYRADL..PKPGRPRRP....RP--PPRK---PGEPRP-RPRWGWKFWLISIvlgVFLAGLSALFSGYAFVQEHYLQDVPETPAKEQLDVINRAPAIRFFDR
A0A2D2AVU7_9CAUL/4-131             ..s-DNWSLPPYRFEPEQEPAPEAAPNPDSEPKAEFARGTGRK.PP..KP------P..KPPKPPREP....--GGGFRWTSLFSWAGS--PKLRWVWLSLLI...LILAGMVAVMAGLVYIDRKYLTDLPALPARDALFAVNRAPGIRFEDR
A0A2R7RQ79_9PSED/1-104             epq----------------------------------------.-P..APRPQTAFG..APPPPPEDPrppeEPREPFRADLAHQKARKRARRSGWILGLVLG...GLLLGIIAAGSTAGYVWWKYLRDTPQLPSRESLFAVNRAPGIRFEDK
#=GC seq_cons                      ...hNDWTLPPY+FDDt..ss..s+P.s.sAssuss...hs....P..sP......s..tsP.PP.cP.....PcEPFRADLtHstA++.t.+hGWlWhsLLl...uhLlGllAsuuGuuYVWaKYL+DTPtLPSREALFAVNRAPGIRFEDR
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