#=GF ID Packaging_FI
#=GF AC PF14000.7
#=GF DE DNA packaging protein FI
#=GF AU Bateman A;0000-0002-6982-4660
#=GF SE Jackhmmer:B2PPD2
#=GF GA 27.00 27.00;
#=GF TC 31.90 37.80;
#=GF NC 25.60 25.90;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Family
#=GF RN [1]
#=GF RM 8468297
#=GF RT Sites and gene products involved in lambdoid phage DNA
#=GF RT packaging.
#=GF RA Smith MP, Feiss M;
#=GF RL J Bacteriol. 1993;175:2393-2399.
#=GF DR INTERPRO; IPR025147;
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF CC This family includes the lambda phage DNA-packaging protein FI.
#=GF CC Proteins in this family are typically between 124 and 140 amino
#=GF CC acids in length. There is a conserved EEE sequence motif.
#=GF SQ 35
#=GS A0A0L0AS55_9ENTR/2-128 AC A0A0L0AS55.1
#=GS A0A0H2VTS0_SHIFL/3-125 AC A0A0H2VTS0.1
#=GS J9JUN9_ACYPI/332-421 AC J9JUN9.2
#=GS A0A346FJ27_9CAUD/15-142 AC A0A346FJ27.1
#=GS A0A2R9YJP4_9CAUD/2-129 AC A0A2R9YJP4.1
#=GS J9KTE3_ACYPI/13-92 AC J9KTE3.2
#=GS X1WR78_ACYPI/3-57 AC X1WR78.1
#=GS A0A0H3JJM1_ECO57/2-129 AC A0A0H3JJM1.1
#=GS FI_LAMBD/2-129 AC P03709.1
#=GS FI_LAMBD/2-129 DR PDB; 2LSM A; 72-129;
#=GS A0A0J5KR44_PLUGE/2-125 AC A0A0J5KR44.1
#=GS K7P7M3_9CAUD/3-135 AC K7P7M3.1
#=GS M9NZD6_BPPH8/15-147 AC M9NZD6.1
#=GS A0A3E2N3P4_9CLOT/2-129 AC A0A3E2N3P4.1
#=GS A0A0K2FIR1_9CAUD/2-129 AC A0A0K2FIR1.1
#=GS A0A1E2Z7W9_9GAMM/2-129 AC A0A1E2Z7W9.1
#=GS K7PM13_9CAUD/3-132 AC K7PM13.1
#=GS Q8ZMZ9_SALTY/3-116 AC Q8ZMZ9.1
#=GS V5AZG1_9GAMM/2-129 AC V5AZG1.1
#=GS A0A085AFP1_9ENTR/3-128 AC A0A085AFP1.1
#=GS X1WK63_ACYPI/80-190 AC X1WK63.1
#=GS A0A083ZYT0_9GAMM/2-129 AC A0A083ZYT0.1
#=GS A0A0B8YBC3_9SPHI/15-142 AC A0A0B8YBC3.1
#=GS A0A1S1V4Q7_9FIRM/2-129 AC A0A1S1V4Q7.1
#=GS X1XJK9_ACYPI/10-95 AC X1XJK9.1
#=GS A0A2G1VM43_9FLAO/2-129 AC A0A2G1VM43.1
#=GS K7PHB8_9CAUD/2-129 AC K7PHB8.1
#=GS O64323_BPN15/3-141 AC O64323.1
#=GS A0A2X3DXI6_KLUCR/3-131 AC A0A2X3DXI6.1
#=GS A0A066UJV0_9GAMM/2-129 AC A0A066UJV0.1
#=GS A0A1I9KF86_9CAUD/3-97 AC A0A1I9KF86.1
#=GS K7P7S8_9CAUD/2-129 AC K7P7S8.1
#=GS A0A2S4MXD1_SHIFL/3-130 AC A0A2S4MXD1.1
#=GS A0A2G8DRY2_9GAMM/2-112 AC A0A2G8DRY2.1
#=GS R8AR53_PLESH/3-60 AC R8AR53.1
#=GS A0A417YE14_9BACI/2-129 AC A0A417YE14.1
A0A0L0AS55_9ENTR/2-128 .........TKDELIARLKALGAQLGRDVSLAGSKEELAMRVAELEEELE....DDG..DGGSGDVTT.ATTD..ASVLPG.PGT----...AATLA...TSERSPVALKKVVARATLHID.AIAEDDDIPVPIATLGTVIRISSQYVTGLVNAGLV............................................
A0A0H2VTS0_SHIFL/3-125 .........TKEENLKRLCELAERLGREPDVSGSAADIAQRVAELEEELG....DAG..EVAEPDTYSpSKDD.pTAHKG-.-ESVPEQ...PGIVT...---GDETGQVTVVALATLHTK.-----CNGSVIFVSPGTSFRVSAEVAASMAAGGLA............................................
J9JUN9_ACYPI/332-421 .........EKEKLIARLNDLGTQLNGKVSTNGTIQELTMRIDELEKELDgdacSID..VSNS-----.----..------.-------...-----...---------------------.-----------------------------------nnpftdinlpcnpilgdtlsidsinladndfenvlfss......
A0A346FJ27_9CAUD/15-142 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
A0A2R9YJP4_9CAUD/2-129 .........TKDELIARLQVLGEQLNRDVSLTGTKEELALRVAELEEELD....DTD..DAAGQDTSL.SPENvlTGHENE.VVSAQPD...TVIHD...-----TAELVTVVALVTLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
J9KTE3_ACYPI/13-92 nnthydldg--------------------------------------DAI....SID.gENGEKNAPD.STDS..TDSTDSdVD----G...TEKVK...TDAVTTDDRVSVETLVTLHIN.ALHATRND---------------------------lfipida.....................................
X1WR78_ACYPI/3-57 .........KKENLIARLNDLGTHLSREVSSSGFIQELTMRIAELEKELD....-GD..---------.----..------.-------...-----...---------------------.-----------------------------------assidapifagv................................
A0A0H3JJM1_ECO57/2-129 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELEEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHVTRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
FI_LAMBD/2-129 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
#=GR FI_LAMBD/2-129 SS .........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXX..XXXXXXXXX.XXXXXXXXXXXX.XXXXX--...-----...------S--EEEEESS-B---.EE-SSSS-EES-B-TT-EEEE-HHHHHHHHHTTSE............................................
A0A0J5KR44_PLUGE/2-125 .........TKEELIARLKALAEQLGRDVNLTGSKEDLAMRVAELEEEIG....--D..EGDGESDAG.DNEQ..AGGETT.AQA----...TGSVP...KGNV-QDSLIRIKTLFSLHVE.AWHELSDEPMSLVEPGVVVRVSPADAQELFTRKLA............................................
K7P7M3_9CAUD/3-135 .........EKEKLVARLNELGTQLNREVSSSGTIQELTMRIAELEEELDgdaiSVD.gKNGVQNASD.STDS..TDST--.-DSNVAN...VAKVK...TESATTGDLVSVETLATLHID.ALHATRNEPVSIVEPGVIIRVSEQDADDLIAKGLA............................................
M9NZD6_BPPH8/15-147 .........EKEKLIARLNDLGTQLNREVSTSGTIQELTMRIAELEEELDgdasSID.gENGEKNAPD.STDS..TDSTDSdVD----G...TEKVK...TEAVTTDDRVSVETLVTLHIN.ALHATRNESVSIVEPGVVIRVTDVEANDLISRALA............................................
A0A3E2N3P4_9CLOT/2-129 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
A0A0K2FIR1_9CAUD/2-129 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
A0A1E2Z7W9_9GAMM/2-129 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
K7PM13_9CAUD/3-132 .........EKEKLVARLNELGTQLNREVSTSGTIQELTMRIAELEEELDgnagSVD.gENGVQNASD.STDS..TDN--N.VAN----...VAKVK...TESATTGDLVSVETLATLHID.ALHATRNEPVSIVEPGVIIRVSEQDADDLIAKGLA............................................
Q8ZMZ9_SALTY/3-116 .........TKEENIQRLRELATRLGRDPDVSGSAAELSQRVMEWEEEAE....---..---------.----..AEHLPA.VEN-DSD...ESIVP...PGIGQRSERVLIRALRTLHIC.AIDPDSNRELDMVMAGNPARISQHDVDELIAAGLI............................................
V5AZG1_9GAMM/2-129 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
A0A085AFP1_9ENTR/3-128 .........TKAENIVTLVALAEKLGRQVDTTGTAAEVAQRVAEWQEEAD....GLD..GTGTEPVDD.GEPV.gT----D.SESAQQP...AAISP...S---EHDGMVLVKLLMSVHLAgAYAADGVTKVDIGTAGQQVRIPESLVEPL------hrekvi......................................
X1WK63_ACYPI/80-190 .........EKKKLIARLNDLGTQLNREVSTYGTIHELTMRIADLEEELDgdasSID.gENGEKNAPD.STDS..TDSTDSdVD----G...TEKVK...TEAVTTDDRVSVKTLVTLHIN.ALHATRNESVSIV----------------------............................................
A0A083ZYT0_9GAMM/2-129 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
A0A0B8YBC3_9SPHI/15-142 .........TKNELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
A0A1S1V4Q7_9FIRM/2-129 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
X1XJK9_ACYPI/10-95 .evprlekn-----------------------------------------....---..------A--.----..PDSTDR.TDCTDSDvdgTEKVK...TEAVTTDDRVSVETLVTLHIY.ALPATRNESVSIVEPGDVIRVTDGEANDLISRALA............................................
A0A2G1VM43_9FLAO/2-129 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
K7PHB8_9CAUD/2-129 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
O64323_BPN15/3-141 .........EKEKLIARLNELGTQLNREVSTSGTIQELTMRIAELEEELDgdatSVD.gESGGQNAAD.STDS..TDSTDS.TDSTDSD...VADVEkvkSEAGTNGDQVSVETLATLHVE.ALHATRNEPVSIVEPGVIIRVSEQDADELISKGLA............................................
A0A2X3DXI6_KLUCR/3-131 .........EKEKLIARLNELGVQLGREVNTGGTIQELSMRIAELEEELD....GGV..DTDGVENGG.VSDG..ATSPGT.VEPVAPV...NTVLT...GSI--DDALVAVETLATLHIE.ALHATRDEPVSIVEAGTVIRVTETDANSLVALGLV............................................
A0A066UJV0_9GAMM/2-129 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
A0A1I9KF86_9CAUD/3-97 .........EKEQLIARVAELSAKLGRDADTTGTVAELKARIEELEVELD...eDTGlvNGSG-----.----..------.-------...-----...---------------------.-----------------------------------ndghtqplsltpaatrsesagnlvqiipkvtlhlrlgnepllvv
K7P7S8_9CAUD/2-129 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
A0A2S4MXD1_SHIFL/3-130 ........k-KDDNLKRLRELAASLGREPDISGSAADIAQRVAELEEELA....NMD..DTDIRDKSA.HPENalTGHENE.VISAQPE...TVIQN...-----MDDLVTVVALVTLHTD.ALHATRDEPLAFVPPGMAFRVFAGVAAGMTERGLA............................................
A0A2G8DRY2_9GAMM/2-112 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELEEELD....DTD..DAAGQDSSV.SPENalTGHENE.VVSAQTD...TVT--...----DTAALVTVVALVTLHTD.ALHATRDEPVAFVLPGTAF----------------............................................
R8AR53_PLESH/3-60 .........QKEELITQLNALSEQLGRKLPVTGSLADLQQRVREAQEELA....EMD..DV-------.----..------.-------...-----...---------------------.-----------------------------------prvsgeksaakg................................
A0A417YE14_9BACI/2-129 .........TKDELIARLRSLGEQLNRDVSLTGTKEELALRVAELKEELD....DTD..ETAGQDTPL.SRENvlTGHENE.VGSAQPD...TVILD...-----TSELVTVVALVKLHTD.ALHATRDEPVAFVLPGTAFRVSAGVAAEMTERGLA............................................
#=GC SS_cons .........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XXX..XXXXXXXXX.XXXXXXXXXXXX.XXXXX--...-----...------S--EEEEESS-B---.EE-SSSS-EES-B-TT-EEEE-HHHHHHHHHTTSE............................................
#=GC seq_cons .........TK-ELIARLpsLGEQLNRDVSlTGTtpELAhRVAELcEELD....-sD..EsuGp-ssh.Sp-s..Tuppsp.VsSsps-...Tsllc........Tu-LVoVhALVpLHsD.ALHATRDEPVuhV.PGsshRVSsssAs-hhp+GLA............................................
//
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