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Database: Pfam
Entry: Pathogen_betaC1
LinkDB: Pathogen_betaC1
Original site: Pathogen_betaC1 
#=GF ID   Pathogen_betaC1
#=GF AC   PF09593.11
#=GF DE   Beta-satellite pathogenicity beta C1 protein
#=GF PI   Phage_C1; 
#=GF AU   Coggill P;0000-0001-5731-1588
#=GF SE   Pfam-B_991 (release 21.0)
#=GF GA   25.00 25.00;
#=GF TC   46.80 46.60;
#=GF NC   22.10 19.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   11437658
#=GF RT   Identification of dna components required for induction of
#=GF RT   cotton leaf curl disease. 
#=GF RA   Briddon RW, Mansoor S, Bedford ID, Pinner MS, Saunders K,
#=GF RA   Stanley J, Zafar Y, Malik KA, Markham PG; 
#=GF RL   Virology. 2001;285:234-243.
#=GF RN   [2]
#=GF RM   14551819
#=GF RT   Cotton leaf curl disease is associated with multiple monopartite
#=GF RT   begomoviruses supported by single DNA beta. 
#=GF RA   Mansoor S, Briddon RW, Bull SE, Bedford ID, Bashir A, Hussain M,
#=GF RA   Saeed M, Zafar Y, Malik KA, Fauquet C, Markham PG; 
#=GF RL   Arch Virol. 2003;148:1969-1986.
#=GF RN   [3]
#=GF RM   17872543
#=GF RT   A monopartite begomovirus-associated DNA beta satellite
#=GF RT   substitutes for the DNA B of a bipartite begomovirus to permit
#=GF RT   systemic infection. 
#=GF RA   Saeed M, Zafar Y, Randles JW, Rezaian MA; 
#=GF RL   J Gen Virol. 2007;88:2881-2889.
#=GF DR   INTERPRO; IPR018583;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   Cotton leaf-curl disease - CLCuD - is of major economic
#=GF CC   importance in cotton-growing areas of the far-east. The
#=GF CC   infectious agent appears to be a single-stranded DNA molecule of
#=GF CC   approx 1350 nucleotides in length, which, when inoculated with
#=GF CC   the Begomovirus into cotton, induces symptoms typical of CLCuD.
#=GF CC   This molecule requires the Begomovirus for replication and
#=GF CC   encapsidation [1]. DNA beta encodes a single protein, betaC1.
#=GF CC   The intracellular distribution of betaC1 is consistent with the
#=GF CC   hypothesis that it has a role in transporting the DNA A of
#=GF CC   Begomovirus from the nuclear site of replication to the
#=GF CC   plasmodesmatal exit sites of the infected cell. The DNA
#=GF CC   beta-encoded protein, betaC1, is the determinant of both
#=GF CC   pathogenicity and suppression of gene silencing [3].
#=GF SQ   38
#=GS A0A191KVK2_9VIRU/2-117   AC A0A191KVK2.1
#=GS H1ZWP6_9VIRU/2-118       AC H1ZWP6.1
#=GS A4F1V8_9VIRU/2-116       AC A4F1V8.1
#=GS A0A0M4ARL0_9VIRU/33-149  AC A0A0M4ARL0.1
#=GS E7BNB9_9VIRU/2-118       AC E7BNB9.1
#=GS B1B3G7_9VIRU/2-116       AC B1B3G7.1
#=GS A9NJ54_9VIRU/2-118       AC A9NJ54.1
#=GS C1L3H4_9VIRU/2-117       AC C1L3H4.1
#=GS I1SZG7_9VIRU/2-118       AC I1SZG7.1
#=GS Q4VZ15_9VIRU/2-118       AC Q4VZ15.1
#=GS Q99A12_9VIRU/24-140      AC Q99A12.1
#=GS Q14RT6_9VIRU/2-116       AC Q14RT6.1
#=GS A0AB29_9VIRU/2-118       AC A0AB29.1
#=GS Q6ZX24_9VIRU/2-118       AC Q6ZX24.1
#=GS Q5K2L0_9VIRU/2-118       AC Q5K2L0.1
#=GS K7WN78_9VIRU/2-118       AC K7WN78.1
#=GS Q7T471_9VIRU/2-117       AC Q7T471.1
#=GS A9XE50_9VIRU/4-120       AC A9XE50.1
#=GS I3QBA1_9VIRU/2-117       AC I3QBA1.1
#=GS A0A1P8JPQ3_9VIRU/2-118   AC A0A1P8JPQ3.1
#=GS Q2VU50_9VIRU/2-89        AC Q2VU50.1
#=GS Q80MT8_9VIRU/2-118       AC Q80MT8.1
#=GS B0JEU4_9VIRU/3-117       AC B0JEU4.1
#=GS Q7T470_9VIRU/2-116       AC Q7T470.1
#=GS C3VIY0_9VIRU/5-119       AC C3VIY0.1
#=GS E5Q3H4_9VIRU/2-117       AC E5Q3H4.1
#=GS D3HTY4_9VIRU/2-118       AC D3HTY4.1
#=GS C9XIB2_9VIRU/20-104      AC C9XIB2.1
#=GS A0A0M4ARA7_9VIRU/2-118   AC A0A0M4ARA7.1
#=GS G1C5E5_9VIRU/14-129      AC G1C5E5.1
#=GS A5H1F9_9VIRU/2-120       AC A5H1F9.1
#=GS Q7T476_9VIRU/33-149      AC Q7T476.1
#=GS A0A1L4AB17_9VIRU/3-117   AC A0A1L4AB17.1
#=GS Q6I6F8_9VIRU/2-116       AC Q6I6F8.1
#=GS M4UQM4_9VIRU/26-142      AC M4UQM4.1
#=GS A7LIE3_9VIRU/2-117       AC A7LIE3.1
#=GS B7ZDP2_9VIRU/11-127      AC B7ZDP2.1
#=GS E7BND2_9VIRU/24-140      AC E7BND2.1
A0A191KVK2_9VIRU/2-117              ......TIKYKNNKGVTFIVNVYVQE-ARINCKIQMTANKEAYVSSTTYDIPYSFEEVIIP....FDFNGTEEQIANAIKQIFNGINYREMRHEDIVDAIDMVMAENENMIGMQIIEPHRIKTKTSV....
H1ZWP6_9VIRU/2-118                  ......TRSGTNKQGVRFTVDVRIMENMKIFIHMRSVSTKSPSLSKYEGIVKYTYEDMHVP....FDFNGFEENIIANFLFAYNGANIEEIEIEDIVQRIDMHVLQNPEILGMDVIEPYVFNKKFTV....
A4F1V8_9VIRU/2-116                  ......TITYSNGNGIKFIIDVRLQQ--FISVSVQVYSTNQAILTGFNCNIPYTYEQIIAP....FDFNGTEEIIRNTLELMYEDSDVSNFQVEDMIETIDILMTEMFTDMGVETMRRCIVRHKYTV....
A0A0M4ARL0_9VIRU/33-149             ......TRSGTNKQGVKFTVDVRIMENMKIFIHIRIISTMSPALIKYEGIVKYTYGDMQVP....FDFNGFEGNIIANFLFANNGAKIEEIEIEDIVQRLDILVLENPEILGMDVIEPYVFNKKFTV....
E7BNB9_9VIRU/2-118                  ......TRFSRTREGIVIREDVRDKQQQRASVHKYISSAKWSSHITKAFIVDYAYQQLHIP....FDFTGVEGEITSTFKFHYWGSKAEEILEEDIIHVVDIIIMENPDIMVMEVNEPVIIDSNII-i...
B1B3G7_9VIRU/2-116                  ......TITYNNGWGLKFTIDVRLQP--TLRVMVKVFSTNQPVMACFNCTIPYTYVEMVPP....LDFNGTEEAIKNRLEIMYHDSNIFDFKEEEMLDTIDALMLERFNEMGIDTLGHCFIRCKFAV....
A9NJ54_9VIRU/2-118                  ......TIKYNNKRGMEFTIDVKINEDNSILVHIELFSTQSPALVKKNFMIPYGHDGIIPP....FDFNALEEGIQNLLQIMYKDSDIGEFRQEDMVETIDLLMMEEAPLVDIRIGDEYDVCTKVCV....
C1L3H4_9VIRU/2-117                  ......TIKYKNNKGVTFVVNVYLQE-ERINCKIQMTANKEAYVSSTTYDIPYSFEEVIIP....FDFNGTEEQIANTIKIIFNELNYREMKHEEIVEAIDMIMAENENIFNMQIIEPHRVNTKTSV....
I1SZG7_9VIRU/2-118                  ......TTSGTNKKGVRFIVDVRIMENMKIFIHMRILSTKSPALIKYEGIVQYTYEDIHVP....FDFNGFEGSIIANFLFAYNWAKIDEIEIEDIVHRLDILVLENPEILGMDVNEPYVFNKKFTV....
Q4VZ15_9VIRU/2-118                  ......TISYTNDKGMLFIINVKFRSEIKFRVDVEVFSTKSPALVKNKFSIPYGHNGIIPP....FNFNALEEGIKNILRIMYRDSTIEEFKSEDMVEIIDIMMQEEAPVIDIQVNDEYHVYKNVTV....
Q99A12_9VIRU/24-140                 ......TRFSKNREGIVFKVDVRLMQQQRISVHMQISSTRSPAISTRTFIIDYTYQQLHIP....FDFNGLEGTITSTFKFHYWGSKAEEILEEDIIHMVDIIIIENPDIMGMDVNEPVTIDNKII-i...
Q14RT6_9VIRU/2-116                  ......TITYNNGKGVTFTINVRISP--NLKVHLRMLCTNEPVMSRYNYILPYEHEDIFPP....FDINGTEEAVKETIRIMTEGVYFKDITKEELLDSIDTMMIERFQFIELDTKGVTSVTSRCT-l...
A0AB29_9VIRU/2-118                  ......TIRYTTTKGLSFIINVRLRSDREISTEIQFFSTRTTFLQKQHFRIPYTHQGINGP....FDFNAIEEGIKNLLRLMYRDSPQADFRYEDMIEAIDILMMQEAPVLDINLGEEYQVYSSTT-m...
Q6ZX24_9VIRU/2-118                  ......TIQYTNTKGLKFIIDVRLQGPKFVMVKVQFSSTRAPAMIKRRFNIPYGHNGIMIP....FDFNGLETGIRDMMELLYKDACYEQFKQEEMVEMIDLLMMQEANVLDINLDVSFDVSQNAT-t...
Q5K2L0_9VIRU/2-118                  ......TRSGTNMQGVRFTVDVRIMDNVKIFIHMRLVSTKSPTLIKYEGIVKYTYGNMHVP....FDFNGFEGNIIANFLFAYNGAKIQEIEIEDIVHRLDIIVLENPEILGMDVIEPYVFNKKFTV....
K7WN78_9VIRU/2-118                  ......TIKYNNMKGLEFLIDVKLQEDTSFLVQIELASTKSPALAKKKFMIPYRHQGIIPP....IDFNSLEEGIKHCLKIMDKESTIGEFKQEDMVQVIDILMMEEAPVEDIDVGDEYDVFINSSV....
Q7T471_9VIRU/2-117                  ......TITLRNTKGVHFRVDVFLKD-DHIDCKIEVTATKESYLRKSTFIIPYHFADVFIP....FDFNGSEEEIMHGLRNMFKDTTHQMIRTEELVDVVDMVMAENVNVLGMELINHYRIINKSSV....
A9XE50_9VIRU/4-120                  ......TIKYTNEKGMIFTIDVKINDDNSILVRIELCSTRSPALAKKIFMIPYGHDGIIPP....FDFNNLEEGIHNILKVMYRDCPVGDFRQEDMVEAIDILMMHEAPLVDIRIGDEYDVCTCVCV....
I3QBA1_9VIRU/2-117                  ......TINYRNSKGVEFKIEVHLIT-ETVRCIIRVATTREPNMMNRRFIIPYSYDQIIAP....FDFNGTEEEIKTALINRYRDTGYSAIREEDIVEIVDMVIAENTGLHGLQIIEPYQFRQNFG-v...
A0A1P8JPQ3_9VIRU/2-118              ......TIEYRNNKGLGFIIDVRRQGAKFVMVKIRFSSTRSPALIKRRINIPYGHDGIIIP....FDFNGLETGIRDMIETLFKDTAMEEFRVEEMIEMIDLLMMQDANVENINLDVEYDVTNNTS-a...
Q2VU50_9VIRU/2-89                   ......TRSGTNKQGVKFTVDVRIMENMKIFIHIRIVSTMSPALIRYEGIVKYTYGDMHVP....FDFNGFEGNIIANFLFANNGAKIEEIEIEDIVQ-----------------------------....
Q80MT8_9VIRU/2-118                  ......TIKYVNQKGLVFVINVTLRGDESIKVYIQLTSTRSPALVKKKFMLPYKHDGIIPP....FDFNNLEEGIRNILAIMYRDSSFDEFRQEDMTEIIDILMMHEAPVFDIQIFDEYGVCTNVS-a...
B0JEU4_9VIRU/3-117                  ...itk--KTSSGKLLQLSVNVF---DSKFIVLLHITDTKSPQIQLQKIKLPYSFNSDDLL....INVTGLEEELMQHLSLICDEHVPSKVYTDYLISAIDILILENSQELGLQVLEPCVVTITYTV....
Q7T470_9VIRU/2-116                  ......TIIYNNGNGIKFIIDVRLQQ--FIRVQVQVYSTNQPVLTGIRCNIPYTYVQMVPP....FDFNGTEELVRDTLELMYDDSDISNFKQEEMIDSIDMVMMHWLSDMGVDTVDRYVVRNTYTV....
C3VIY0_9VIRU/5-119                  ......TITYKNTKGVKFIIDVRLCP--RLNVQVTMISTKEPILSKATYTLPYNHNEIEEP....FDFNGTEEAIRNTIQVMVHDIPFNDIKSEDILDSIDITMMDRFVFIDLDTGGTCKTRCICT-l...
E5Q3H4_9VIRU/2-117                  ......TITYKNNRGVTFKINVYLQE-ARINCDIQVTANKEAYVSTSTYNIPYSFEEVIIP....FDFNGTEEQIANAIAQIFNGLHYREMRQEDIVEAIDMIMAENENVLGIQIIEPHRVKIKISV....
D3HTY4_9VIRU/2-118                  ......TTSGTNKEGVRFIVDVRIMENMKIFIHMRILSTKSPSLIKYEGIVQYTYEDIHVP....FDFNGFEGSIIANFLFAYNGAKIEEIEIEDIVHRLDILVLENPEILGMDVIEPYIFNKKFTV....
C9XIB2_9VIRU/20-104                 ......TIKHTTNKGIKFTIDAKLNE--CFKIIVQVTRTNRNIITKHTYTMYYGYGAILVP....FDFNGLETQIRNTIEVMFHD--IDHFKPEDMI------------------------------gg..
A0A0M4ARA7_9VIRU/2-118              ......TRSGTTKEAVRFTVDVRIMENMKIFIHMSLVSTKSPAIIKYEGIVKYTYGDMHVP....FDFNGFEGNIIANFLFAYNGAKIQEIEIEDIVQRLDIIVLENPEILGMDVIEPYVFNKKFTV....
G1C5E5_9VIRU/14-129                 ......TITHTTNKGIRFVFSLQKKQ-EHFLVTVKVINTSSPVLSKHTYKIRYDYQWNAVP....FDFNGLETSMKNTIEVLYHDSSYNDFKEENMIDAIDTIMFDTNMILGVEIIEPHTCTT----srii
A5H1F9_9VIRU/2-120                  ......TIRYQTSKNIHFTIDVHLKN--RVTVTIRLIYTRSPVMTAITYNIPYTAEENIPPpiitSERDGAEDHIHHILYAIYDDVDIKDFKPEMMLDAVDIMMMDRFDHIGIDTDGSCRIRTIHNV....
Q7T476_9VIRU/33-149                 ......TIKYNNEKGMEFRIDVKINEDNSILVLVELCSTRSPALAKKTFMIPYGHDGIIPP....FDFNILEEGIHNILKVMYKDSRIGEFRQEDMVETIDMLMMHEASVIDIRIADEYDVCTNVCV....
A0A1L4AB17_9VIRU/3-117              htattl-------TMIKFTTNTTLPSPNICIIKLEITSANQPYLVKHKISIPYTYRDIITP....FDLQGNDTLISLALRFAFNAKEYGELKIEDIIELVDLMVLQNDSFVDIDVEASYTNRR----tit.
Q6I6F8_9VIRU/2-116                  ......TITYNNGRGIKFIIDVRLHQ--IIRVIVQVYSTNQPVLTGFKCNIPYTYVQMVPP....FDFNGGRGAYQGHTGIWYDRSDISNFKQEEMIDSIDMVMMHWLSDMGVDTVEKYSIRCIHTV....
M4UQM4_9VIRU/26-142                 ......TIKYNNTKGMEFTIDVKLKEGNSIIVQIELCSTRSPTLAKKIFMIPYGHDGIIPP....FDFNNLEEGIRNILKFMYKDSHIGDFRQEDMVEIIDMLMMQEAPVIDIRIADDYDICTNATV....
A7LIE3_9VIRU/2-117                  ......TITFRSTKGVHFRVDVFLKD-DHIDCRIEVTATKEAYLRKSTFIIPYNFADVFIP....FDFNGSEEEIMNGLKNMFKDTTHQMIKTEELVEVVDMIMAENLNILGMELINHYRIINKSSV....
B7ZDP2_9VIRU/11-127                 ......TIKYKNQKGMEFIIDVRLKEDNSILVQIQLFSTRSPALATRKFMIPYEHNGIIPP....FNFNTLEQGIHNMLALMYKDSNIGDFKQEDMVECIDMLMMEEAPVIDINVMDAYDVYTHSSV....
E7BND2_9VIRU/24-140                 ......TRFSKNREGIVFKVDVRLMQQQRISVQMQISSTRSPAISTKTFIIDYTYQQLHIP....FDFNGLEGTITSTFKFHYWGSKAEEILEEDIIHMVDIIIIENPEIMGMDVNEPVTIDNKII-i...
#=GC seq_cons                       ......TIpasNp+GlcFhlDV+lpp..pIhlplplsST+sPsLs+ppahIPYsapslhsP....FDFNGhEpsIpsslphhYc-ushp-h+pEDhl-tIDhlMh-pssllslclh-.aplppphoV....
//
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