GenomeNet

Database: Pfam
Entry: Ploopntkinase3
LinkDB: Ploopntkinase3
Original site: Ploopntkinase3 
#=GF ID   Ploopntkinase3
#=GF AC   PF18751.5
#=GF DE   P-loop Nucleotide Kinase3
#=GF AU   Iyer LM;0000-0002-4844-2022
#=GF AU   Aravind L;0000-0003-0771-253X
#=GF AU   Burroughs AM;0000-0002-2229-8771
#=GF AU   El-Gebali S;0000-0003-1378-5495
#=GF SE   Iyer LM
#=GF GA   27.00 27.00;
#=GF TC   27.00 54.30;
#=GF NC   26.90 26.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF CL   CL0023
#=GF RN   [1]
#=GF RM   23814188
#=GF RT   Computational identification of novel biochemical systems
#=GF RT   involved in oxidation,  glycosylation and other complex
#=GF RT   modifications of bases in DNA.
#=GF RA   Iyer LM, Zhang D, Burroughs AM, Aravind L;
#=GF RL   Nucleic Acids Res. 2013;41:7635-7655.
#=GF DR   INTERPRO; IPR040717;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   A P-loop Nucleotide Kinase predicted to be involved in modified
#=GF CC   base biosynthesis [1].
#=GF SQ   33
#=GS B3VM26_9CAUD/1-193      AC B3VM26.1
#=GS A0A455LN94_9CAUD/1-182  AC A0A455LN94.1
#=GS A0A7G9W313_9CAUD/1-194  AC A0A7G9W313.1
#=GS A0A6B9LJ35_9CAUD/1-181  AC A0A6B9LJ35.1
#=GS Q1A0B3_9CAUD/1-188      AC Q1A0B3.1
#=GS A0A5J6TJX3_9CAUD/1-179  AC A0A5J6TJX3.1
#=GS A0A386KB41_9CAUD/1-180  AC A0A386KB41.1
#=GS W8EJM5_9CAUD/1-186      AC W8EJM5.1
#=GS G1BPB4_9CAUD/1-190      AC G1BPB4.1
#=GS A0A6B9LCF2_9CAUD/1-190  AC A0A6B9LCF2.1
#=GS G1BNR3_9CAUD/6-188      AC G1BNR3.1
#=GS A0A4D6E2N7_9CAUD/1-198  AC A0A4D6E2N7.1
#=GS A0A1L6BYU5_9CAUD/1-186  AC A0A1L6BYU5.1
#=GS A0A2Z5HE27_9CAUD/6-188  AC A0A2Z5HE27.1
#=GS W8EJD7_9CAUD/1-186      AC W8EJD7.1
#=GS S5Y5G5_9CAUD/1-187      AC S5Y5G5.1
#=GS A0A0F6YRW9_9CAUD/1-186  AC A0A0F6YRW9.1
#=GS A0A514DHG9_9CAUD/1-194  AC A0A514DHG9.1
#=GS A0A5Q2WFF5_9CAUD/1-188  AC A0A5Q2WFF5.1
#=GS W8G0M1_9CAUD/1-186      AC W8G0M1.1
#=GS A0A5P8D6F6_9CAUD/4-188  AC A0A5P8D6F6.1
#=GS A0A0F6WDP6_9CAUD/1-192  AC A0A0F6WDP6.1
#=GS A0A7T3KCD3_9CAUD/1-185  AC A0A7T3KCD3.1
#=GS A0A4D6E523_9CAUD/1-198  AC A0A4D6E523.1
#=GS A0A514DI07_9CAUD/1-194  AC A0A514DI07.1
#=GS A0A6B9L7I8_9CAUD/1-191  AC A0A6B9L7I8.1
#=GS A0A8F3IP84_9CAUD/1-183  AC A0A8F3IP84.1
#=GS A0A2S9Z300_9CORY/1-179  AC A0A2S9Z300.1
#=GS A0A345KWG6_9CAUD/1-194  AC A0A345KWG6.1
#=GS Q0RM57_FRAAA/1-122      AC Q0RM57.1
#=GS S5Y177_9CAUD/1-177      AC S5Y177.1
#=GS V5UNI0_9CAUD/11-203     AC V5UNI0.1
#=GS Q716S4_9CAUD/6-188      AC Q716S4.1
B3VM26_9CAUD/1-193                 ....MTPRMIYLVGQPGSGKSTLMAALTKGLV.......RC....S.ID.TEA....PVPHDLLLDRVTG.......C........AVGAEIGKQRG.AFSGTDALASSIIDKAVPWVQS......H....P.Y......DLLLAEGARLANKRFIQAAADAGYAVMLGLLDHDQADAWRKKRSKAIG.R.E.QNPSWVKGRLTASRRLAEA...YPSafvvggaviAPEPG..K.VIT..LAGHPDELEPVLAAFM-v..................
A0A455LN94_9CAUD/1-182             ....MTNRLIYLVGQPGSGKSTLMADLTAHFD.......RH....H.IG.AAPd..yPVAHDVLTSRPDG.......R........VVGAELGVRRQ.HFGGTDALPSSIIEKAVPWIET......T....P.Y......QLVLAEGARLANRRFIQAAINGSYQPVIVLLDHPQAEEWRKARSEELG.R.T.QDPSWVKGRLTSSRRLAEW...AKD.........QA---..-.IEV..IEGHPDEIAAQLGEI--is.................
A0A7G9W313_9CAUD/1-194             ....MTPRMIYLVGQPGAGKSTLMASLTKGLV.......RS....T.ID.DSG...tLVPHDVLVDRVTG.......A........VVGAEIGKRRG.AFSGTDALASSIIDKAVPWVHT......Q....P.Y......GLLLAEGARLANKRFIDSAAEAGYAIILGLLDHDQADAWRKQRSKALG.R.E.QNPSWVKGRLTSSRKLGAA...YPSalvvggaviAPEPG..K.VIT..LAGHPDELEPVLAAF--is.................
A0A6B9LJ35_9CAUD/1-181             ....MTDRLIYLIGAPGSGKSTLMARLTSHLE.......RE....P.QT.-GG....PVAHD-LLRFLDG.......V........VAGAEIGRRRE.LFGGTDALPASIIEKAIPWVQS......R....P.Y......ELLLAEGARLANQRFLMAAREAGYEVHLAHLDHPDVEEWRAKRSEEIG.K.V.QDASWVKGRTTASAKLAEH...FVR.........HPELG..-.VRV..YNGHPDRLIEELES---qlg................
Q1A0B3_9CAUD/1-188                 ....----MIYLVGQPGSGKSTLMAALTKGLV.......RA....P.WD.-EH....TVPHDQLVDRVTG.......A........VVAAEIGKQRG.AFSGTDALASSIIDKAVPWIQT......Q....P.Y......DVLLAEGARLANRRFIDAAAAAGYAVMLGLLDHDAAEGWRKKRSKALG.R.E.QNPSWVKGRLTASRRLADA...YPSalvvagaviAPEPG..K.VAV..LKGHPDELERVLAAFM-s..................
A0A5J6TJX3_9CAUD/1-179             ....MNKRLVYVIGQPGSGKTTLMSALTSASV.......RL....P.Q-.-DK....PVPRDLLATRNTG.......R........VWAVELGRQRPgGFSGTDALASTAINTAEPWLRS......Q....TeA......PVVLAEGARLANRRFLTAAVESGYQVLLVLLDHADAERWREARSVEIG.K.H.QNASWVKGRRSASLNLAAD...---.........-PPAG..-.VEV..LRGHPSAVQ--------epiwawvr...........
A0A386KB41_9CAUD/1-180             ....MTHCLIYLVGPPGSGKSTLMARLTGPLE.......RI....P.FYdPRA....VVAHDQLF--ADD.......E........LVGAEIGIRRE.LFSGTDALPASIIEKAVPWVQT......M....P.Y......RLLLAEGQRLANRRFLTAAADAGYEVVLALLDHEDTEDWRRKRARAIG.R.T.QNAAWVKGRISASRNLAEQ...MRD.........RQN--..-.VTV..LTGHPDELYPVLEQLV-g..................
W8EJM5_9CAUD/1-186                 ....MTARLIYLVGQPGSGKSTLMSKLTAGFD.......RH....K.IA.PNEa..yPVAHDVLTERVTG.......E........VVGAELGVRRE.LFSGTDALPSSIIDKAAPWVRS......Q....P.Y......PLLLAEGARLANRRFIDAALEGGYEVTLVLLDHNDAEDWRKVRSKAIG.K.T.QNPSWVKGRLSASRNLADA...LTG.........PAYQG..KaVSV..VRGHPDPILSVLK----tgv................
G1BPB4_9CAUD/1-190                 ....----MIYLVGQPGAGKSTLMASLTKGLV.......RS....T.ID.DSG...tLVPHDVLVDRVTG.......A........VVGAEIGKRRG.AFSGTDALASSIIDKAVPWVHT......Q....P.Y......ALLLAEGARLANKRFIDSAAEAGYAVILGLLDHDQADAWRKQRSKALG.R.E.QNPSWVKGRLTSSRKLGAA...YPSafvvggaviAPEPG..K.VIT..LAGHPDELEPVLAAF--is.................
A0A6B9LCF2_9CAUD/1-190             mtds-----LYLLGAPGVGKSTAMATWLDSRD.......MA....V.AP.DPSrvkgKLVGHGLYNVLTG.......D........TQGVYLGRMRE.DFPGTDGLSMAVAPDARAWAGTl....sRrhegG.M......NYVVGEGQRLGNPGFLTALAENTWLTIVLLSAHPDALT---ARRDERG.S.T.QSPSWMQGAATQARNTFQE...MTK.........RGVNQ..A.IEIdtTNLTPDEI---------aerisrs............
G1BNR3_9CAUD/6-188                 ....TNHRLIYLIGAPGAGKSTMMAHLTDCFD.......RE....H.VP.GTD....TAPAYDLLKYTDG.......E........VAGVELGKRRP.QFSGTDALPASIIEKAIPWLNT......K....P.F......RLVFAEGARLANKRFLDAAVAAGYEVHLGWLNHPDVDAWREARSAEVG.K.V.QSEAWVKGRVTAVTKLVEN...YIN.........RPERG..-.VKV..YVGGPEQLTSDMEHLL-g..................
A0A4D6E2N7_9CAUD/1-198             ...m--RRLVYIVGYPGSGKSTLFTGVTDRHAphkdvilRT....E.LA.TVR....GVERERHLRGVLL.......G........SNGVTLGRVGT.AFPGVDGMQRDTQAMARDWLAA.....gA....P.MphmrqdRWILLEGSLLAHDKFMSVAMEHT-RLTLLVVTAKDSEARAKARADKIG.SdY.QKDSWRKGKITQTDKIVNW...AID.........HGVET..-.LEV..TNDIPGQT---------edlvdiveell........
A0A1L6BYU5_9CAUD/1-186             ....MSPRLIFIVGGPGSGKSQLMADLTAPYQ.......RI....P.VN.QKHp..eWVLHDMLRDPATG.......T........VIGAELGQRRG.LFAGTDTLASAIIDKAVPWIEV......H....P.Y......DLILAEGARLATPRFLQSALDAGYDVTVALLDHDQAEPWREERARKLK.R.V.QNESYVEVRRSSARSFADT...AIK.........LKGRY..P.VRV..WAGHPDDLRQGLQEIIA...................
A0A2Z5HE27_9CAUD/6-188             ....TNHRLIYLIGAPGAGKSTMMAHLTDCFD.......RE....H.VP.GTD....TAPAYDLLKYTDG.......E........VAGVELGKRRP.KFSGTDALPASIIEKAIPWLNT......K....P.F......RLVFAEGARLANKRFLDAAVAAGYEVHLGWLNHPDVDAWRAARSAEVG.K.V.QSEAWVKGRVTAVTKLVEN...YIN.........RPERG..-.VKV..YVGGPEQLTSDMEHLL-g..................
W8EJD7_9CAUD/1-186                 ....MTARLIYLVGQPGSGKSTLMSKLTAGFD.......RH....K.IA.PNEa..yPVAHDVLTERVTG.......E........VVGAELGVRRE.LFSGTDALPSSIIDKAAPWVRS......Q....P.Y......PLLLAEGARLANRRFIDAALEGGYEVTLVLLDHNDAEDWRKVRSKAIG.K.T.QNPSWVKGRLSASRNLADA...LTG.........PAYQG..KaVSV..VRGHPDPILSVLK----tgv................
S5Y5G5_9CAUD/1-187                 ....MTARLIYLVGQPGSGKSTLMSALTAGFD.......RH....K.IA.PAPd..yPVAHDVLADKTTG.......E........VVGAELGVRRE.LFSGTDALPSSIIDKAAPWVRS......Q....P.Y......PLLLAEGARLANRRFIDAALEGGYEVTLVLLDHNDAEDWRKVRSKAIG.K.T.QNPSWVKGRLSASRNLADA...LSG.........PAYEG..KaVEV..LRGHPDPIRSILKGIDA...................
A0A0F6YRW9_9CAUD/1-186             ....MSPRLIFIVGGPGSGKSQLMADLTAPYQ.......RI....P.VN.QKHp..eWVLHDMLRDPATG.......A........VIGAELGQRRG.LFAGTDTLASAIIDKAVPWIEV......H....P.Y......DLILAEGARLATPRFLQSALDAGYDVTVALLDHDQAEPWREERARKLK.R.V.QNEAYVEARRSSARSFADT...AIK.........LKGRY..P.VRV..WIGHPDDMRQGLQEIIA...................
A0A514DHG9_9CAUD/1-194             mtds-----LYLLGAPGVGKSTAMSWVINHLG.......LD....I.AP.DNTriqgRLTGHGLFEWTTG.......E........TMGVYLGKHRE.DFPGTDGLSMAVAPDARAWASTlrrdreE....G.L......RYVFGEGQRLGNVGFLTALAEH-TWLTVVLLTASQIA--MDARRADRG.S.T.QSPSWMQGAETQARNTFEQ...MQAm......tgKVNRA..IhIDT..TGQAPDEIAE-------qianavg............
A0A5Q2WFF5_9CAUD/1-188             ....MTNRLIYLTGQPGSGKSALMARLTEGFD.......RI....A.IA.PPE...tPVAHDQLVRKVPGgyddgtiE........IIGAELGKRRE.LFGGTDALPSSIIEKAVPWVED......A....P.Y......RLILGEGSRLSNKRFLLAGVRGGYEVTLVLLDHPSAEEWRLERSQEIG.R.T.QDASWVQGRLTASRNLATW...---.........-AEEQ..A.LDV..MRGHPDELLGSLQEL--is.................
W8G0M1_9CAUD/1-186                 ....MTARLIYLVGQPGSGKSTLMSKLTAGFD.......RH....K.IA.PNEa..yPVAHDVLTERVTG.......E........VVGAELGVRRE.LFSGTDALPSSIIDKAAPWVRS......Q....P.Y......PLLLAEGARLANRRFIDAALEGGYEVTLVLLDHNDAEDWRKVRSKAIG.K.T.QNPSWVKGRLSASRNLADA...LTG.........PAYQG..KaVSV..VRGHPDPILSVLK----tgv................
A0A5P8D6F6_9CAUD/4-188             ....MNPRLIYLVGQPGAGKSTLMADLTAEYD.......RV....P.AH.PPE...yPVAHDQLVNRITG.......A........VIGAEIGIVRE.AFSGTDALPSAVIDKAVPWIGT......R....P.Y......PLLLGEGARLGNRRFILAALNAGYDVTLALVDHDQADEWRAARAKALK.R.T.QNESWVKGRRTASINLFNE...MRE.........LSKTQ..S.VRA..WVGSPDSLREGLSEI--ih.................
A0A0F6WDP6_9CAUD/1-192             ....MKPRMIYLVGQPGAGKSTLMAALTKGLV.......RS....P.WH.-EH....TVPHDQLVDRVTG.......E........TVAAELGVQRG.AFSGTDALASSIIDKAVPWIQS......R....P.Y......DLVLAEGARLANRRFIDAALDAGYAVTIGLLDHDQADTWRKRRSKALG.R.E.QSPSWVKGRLTASRNLAAH...YPGalvvagsviPAEPG..K.AIV..LAGHPDELEPILAAVMA...................
A0A7T3KCD3_9CAUD/1-185             ...m--KRLVYIAGAPGSGKTTLAAKLTAPYQ.......RI....P.VL.--S....EVNHDMLRDDETG.......H........VIGAELGEWRG.EFGGTDLLPASVIDAAVPWIGA.....iT....D.Y......DLIIGEGQRLANKRFLLAARAAGYDVTLVLLDHADAAAWQRKRSRKLG.R.I.QNQSWVQGRLNAARQLADF...FDG.........ASITGpgErVKV..LRGHPDELLPQLEGVI-s..................
A0A4D6E523_9CAUD/1-198             ...m--TRLVYIVGYPGSGKSTLFTGVTDRHAphkdvilRT....E.LA.TVR....GVERERHLRGVLL.......G........SDGVTLGRVGT.AFPGVDGMQRDTQAMARDWLAA.....gA....P.MphmrqdRWILLEGSLLAHDKFMSVAHKH-TRLTLLVVTTADSEARAKARADSIG.S.EyQKDSWRKGKITQTDKIVNW...AID.........HGVET..-.LEV..TNDIPGQT---------edlvdiveell........
A0A514DI07_9CAUD/1-194             mtda-----LYLLGAPGVGKSTVMRGVIDHLG.......LDvnpdN.YR.IHK....RLTGHGLFEWTTG.......E........TMGVYLGKHRE.EFPGTDGLSMAVAPDAREWAATlrrdreE....G.V......RYVFGEGARLGNVGFLTALAEHTW-LTVVHLTAD-EDAL-TARRDERG.S.A.QRPSWMRGATTAAANTFAAvqaLTG.........KVNRA..VeINT..TEQAPDILAEQI-----aglig..............
A0A6B9L7I8_9CAUD/1-191             ....MVPRLVYIIGQPGAGKSQLMARLTLPFQ.......RI....S.VP.ADDy..vGVAHDQLVRELSP.......EdgaagtiqIIGAEIGVRRP.AFGGTDALPSAVIDKAVPWVAL......R....P.Y......PLLLAEGARLANRRFLDAALGAGYAVTLVLLDHDDAEAWRRKRAKQIG.R.D.QNASWVKGRLTASRNLAEQ...FRN.........--VPG..-.VQL..IQGAPDDVFEQVRSV--is.................
A0A8F3IP84_9CAUD/1-183             ....MTHRLVYVVGPPGSGKSTLMARLTEEFQ.......RV....PaIV.PDH...gPVAHDEFLDADGN.......P........IDAAELGVQRG.LFSGTDALPSSVIDKAVPWLFE......K....P.Y......RLILAEGARLANKRFLSAAVEAGYEVVLAVLAHDDAEAWRKRRAKAIG.R.D.QNPSWVKGRVTATANLATW...ACD.........--QPG..-.IDV..VTGHPDAVFESLASV--vs.................
A0A2S9Z300_9CORY/1-179             ...m---QLIYLIGPPGAGKSTTMRRITAHLD.......RT....P.MP.KDQ....YPARDALFD--NG.......T........LWGIELGARRP.TFSGTDALPMNANTAACNYLTH......A....P.Eq....pPTILAEGARLANAKFLTTATKAGYDTHLVYIDNPHARQWALDRAAAHHtT.P.QSESWAKGRATAARNLAAR...---.........-PPAG..V.TVH..TVTHPDAAADTIAAI--lr.................
A0A345KWG6_9CAUD/1-194             ....MTPRMIYLVGQPGAGKSTLMASLTKGLV.......RS....T.ID.DSG...tLVPHDVLVDRVTG.......A........VVGAEIGKRRG.AFSGTDALASSIIDKAVPWVHT......Q....P.Y......DLLLAEGARLANKRFIDSAAEAGYAIILGLLDHDQADAWRKQRSKAIG.R.E.QNPSWVKGRLTSSRKLGAA...YPSafvvggaviAPEPG..K.VIT..LAGHPDELEPVLAAF--is.................
Q0RM57_FRAAA/1-122                 ...m----------------------------.......--....-.--.---....-------------.......-........----ELGRRRR.AFSGTDALPMDAVVAAERYVRSgq..aaR....E.T......ALLLGEGARLGCARFLAAAVAGGWTVELVYLHGTEVAAQRRAGRA-A-.-.G.QDERWVRGAATRARRLAEG...---.........-----..-.---..-----------------ppagvlvhrvdvaaevtlp
S5Y177_9CAUD/1-177                 ....MTYRMIYLVGQPGSGKSTLMAELTRPYD.......L-....-.LV.REE....TVPHLGLIDRTTG.......E........VIGAEIGKRRD.SFSGTDALASAIIDKAVPWVST......R....P.Y......EMLLAEGARLANARFLDAAIAAGYDLTVALLDHDQAEEWRLARSRKLK.R.V.QNESWVKGRLSASRNLADA...---.........--MKG..K.ARV..LRGHPDQLRQGLQEIIA...................
V5UNI0_9CAUD/11-203                ....MTPRMIYLVGQPGSGKSTLMAALTKGLV.......RC....P.ID.TEA....PVPHDLLLDRVTG.......C........AVGAEIGKQRG.AFSGTDALASSIIDKAVPWVQS......H....P.Y......DLLLAEGARLANKRFIQAAADAGYAVMLGLLDHDQADAWRKKRSKAIG.R.E.QNPSWVKGRLTASRRLAEA...YPSafvvagaviAPEPG..K.VIT..LAGHPDELEPVLAAFM-v..................
Q716S4_9CAUD/6-188                 ....TNHRLIYLIGAPGAGKSTMMAHLTDCFD.......RE....H.VP.GTD....TAPAYDLLKYTDG.......E........VAGVELGKRRP.QFSGTDALPASIIEKAIPWLNT......K....P.F......RLVFAEGARLANKRFLDAAVAAGYEVHLGWLNHPDVDAWRAARSAEVG.K.V.QSEAWVKGRVTAVTKLVEN...YIN.........RPARG..-.VKV..YVGGPEQLTSDMEHLL-g..................
#=GC seq_cons                      ....Ms.RLIYLVGtPGuGKSTLMApLTsshs.......Rp....s.ls.ssp....sVsHDhLhctsTG.......p........llGAELGcRRs.tFSGTDALsSSII-KAlPWlpo......p....P.Y......cLlLAEGARLAN+RFlsAAh-AGYpVpLsLLDHspA-sWRctRSctlG.+.s.QssSWVKGRlTAoRpLA-t...h.s.........hs.tG....VpV..htGHPDplttsLtth..h..................
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