GenomeNet

Database: Pfam
Entry: Prok-RING_2
LinkDB: Prok-RING_2
Original site: Prok-RING_2 
#=GF ID   Prok-RING_2
#=GF AC   PF14445.7
#=GF DE   Prokaryotic RING finger family 2
#=GF AU   Burroughs AM;0000-0002-2229-8771
#=GF AU   Iyer LM;0000-0002-4844-2022
#=GF AU   Aravind L;0000-0003-0771-253X
#=GF SE   Manual
#=GF GA   22.40 22.40;
#=GF TC   22.50 22.40;
#=GF NC   22.20 21.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   21547297
#=GF RT   Functional diversification of the RING finger and other
#=GF RT   binuclear treble clef domains in prokaryotes and the early
#=GF RT   evolution of the ubiquitin system.
#=GF RA   Burroughs AM, Iyer LM, Aravind L;
#=GF RL   Mol Biosyst. 2011;7:2261-2277.
#=GF DR   INTERPRO; IPR025872;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   RING finger family found sporadically in bacteria and archaea,
#=GF CC   and  associated with other components of the ubiquitin-based
#=GF CC   signaling  and degradation system, including ubiquitin and the
#=GF CC   E1 and E2  proteins. The bacterial versions contain
#=GF CC   transmembrane helices [1].
#=GF SQ   9
#=GS T0S320_SAPDV/296-337      AC T0S320.1
#=GS A0A067CYD0_SAPPC/299-340  AC A0A067CYD0.1
#=GS L0HAQ6_METFS/42-97        AC L0HAQ6.1
#=GS A0A402CPI7_9BACT/81-126   AC A0A402CPI7.1
#=GS A0A2V2N140_9EURY/42-97    AC A0A2V2N140.1
#=GS S0EVK9_CHTCT/82-124       AC S0EVK9.1
#=GS A0A024GAT7_9STRA/234-240  AC A0A024GAT7.1
#=GS A7I4Q2_METB6/12-67        AC A7I4Q2.1
#=GS Q2FKZ9_METHJ/22-77        AC Q2FKZ9.1
T0S320_SAPDV/296-337                 .........ppdv-----PRVSCKLCKNPKGLlDSIRDCTLCGRTAC.R.NCSK------------------klse
A0A067CYD0_SAPPC/299-340             .........ppdv-----PRVSCKLCKNPKGLlDSMRDCTLCGRTAC.R.NCSK------------------klse
L0HAQ6_METFS/42-97                   .............DPRTFSQYLCDLCATPHPV.TGLRQCVLCGRWAC.D.ACWKDDYYTCKSCAGLIRIHSL....
A0A402CPI7_9BACT/81-126              alqeavneisplf-------------------.---SQCRRCGQWRCkD.VCWNDQKGLCKSCAPLL-----aee.
A0A2V2N140_9EURY/42-97               .............DSESFSRYICDLCHRAAPV.PSLRQCVICGRWAC.P.ECWKDEFYVCSSCNGIIRLHQI....
S0EVK9_CHTCT/82-124                  .lqtavqeikplf-------------------.---NQCRRCGRWVC.KeVCWNEARGLCKQCAP-------vee.
A0A024GAT7_9STRA/234-240             ............t---------------PNPL.S-------------.-.----------------------r...
A7I4Q2_METB6/12-67                   .............DPHSFAQFTCDLCNTAHPI.AELRQCVLCGRWAC.N.ACWKDEYYTCRSCAGLIKIHQL....
Q2FKZ9_METHJ/22-77                   .............DPESFSRYVCDLCHSSGSL.SGLRQCVICGRWGC.S.SCWQDEYYLCKSCGGIMNLLLL....
#=GC seq_cons                        ..................sph.CcLCtpstsl.sthRQCslCGRWuC.p.sCWp-thhhCppCss...........
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