GenomeNet

Database: Pfam
Entry: Trypan_PARP
LinkDB: Trypan_PARP
Original site: Trypan_PARP 
#=GF ID   Trypan_PARP
#=GF AC   PF05887.11
#=GF DE   Procyclic acidic repetitive protein (PARP)
#=GF PI   Trypano_PARP; 
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Pfam-B_9554 (release 8.0)
#=GF GA   100.00 100.00;
#=GF TC   100.00 132.10;
#=GF NC   96.50 64.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 45638612 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   2342468
#=GF RT   Transcription of the procyclic acidic repetitive protein genes
#=GF RT   of Trypanosoma brucei. 
#=GF RA   Clayton CE, Fueri JP, Itzhaki JE, Bellofatto V, Sherman DR,
#=GF RA   Wisdom GS, Vijayasarathy S, Mowatt MR; 
#=GF RL   Mol Cell Biol 1990;10:3036-3047.
#=GF DR   INTERPRO; IPR008882;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of several Trypanosoma brucei procyclic
#=GF CC   acidic repetitive protein (PARP) like sequences. The procyclic
#=GF CC   acidic repetitive protein (parp) genes of Trypanosoma brucei
#=GF CC   encode a small family of abundant surface proteins whose
#=GF CC   expression is restricted to the procyclic form of the parasite.
#=GF CC   They are found at two unlinked loci, parpA and parpB;
#=GF CC   transcription of both loci is developmentally regulated [1].  
#=GF SQ   6
#=GS Q389V2_TRYB2/1-129  AC Q389V2.1
#=GS Q581F6_TRYB2/1-123  AC Q581F6.1
#=GS Q581F9_TRYB2/1-114  AC Q581F9.1
#=GS Q389V1_TRYB2/1-141  AC Q389V1.1
#=GS Q581F3_TRYB2/1-127  AC Q581F3.1
#=GS Q581G0_TRYB2/1-129  AC Q581G0.1
Q389V2_TRYB2/1-129             MAPRSLYLLAILLFSANLFAGVGFAAAAEGPEDKGLTKGGKGKgEKGTKVQD------EVEPEPEPEPE.P.EPEP.EPEPEP......EPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPGAATLKSVALPFAIAAVGLVAAF
Q581F6_TRYB2/1-123             MAPRSLYLLAILLFSANLFSGVGFAAAAEGPEDKGLTKGGKG-.GKGTKVSDDDTNGTDPDPEPEPEPE.P.EPEP.EPEPEP......----------EPEPEPEPEPEPEPEPEPEPEPGAATLKSVALPFAIAAVGLVAAF
Q581F9_TRYB2/1-114             MAPRSLYLLAILLFSANVFAGVGFAAAADESASNVIVKGGKGK.------------------EREDGPEePeETGPeETGPEE......-TGPEETGPEETGPE---ETGPE-ETEPEPEPGAATLKSVALPIAVAAAALVAAF
Q389V1_TRYB2/1-141             MAPRSLYLLAILLFSANLFAGVGFAAAAEGPEDKGLTKGGKGKgEKGTKVGADDTNGTDPDPEPEPEPE.P.EPEP.EPEPEPepepepEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPGAATLKSVALPFAVAAAALVAAF
Q581F3_TRYB2/1-127             MAPRSLYLLAILLFSANLFSGVGFAAAAEGPEDKGLTKGGKG-.GKGTKVSDDDTNGTDPDPDPEPEPE.P.EPEP.EPEPEP......------EPEPEPEPEPEPEPEPEPEPEPEPEPGAATLKSVALPFAIAAVGLVAAF
Q581G0_TRYB2/1-129             MAPRSLYLLAVLLFSANLFAGVGFAAAAEGPEDKGLTKGGKGKgGKGTKVSDDDTNGTDPEPEPEPEPE.P.EPEP.EPEPEP......------EPEPEPEPEPEPEPEPEPEPEPEPEPGAATLKSVALPFAIAAVGLVAAF
#=GC seq_cons                  MAPRSLYLLAILLFSANLFAGVGFAAAAEGPEDKGLTKGGKGK.tKGTKVuDDDTNGTDP-PEPEPEPE.P.EPEP.EPEPEP............EPEPEPEPEPEPEPEPEPEPEPEPEPGAATLKSVALPFAIAAVGLVAAF
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