GenomeNet

Database: Pfam
Entry: UPF0242
LinkDB: UPF0242
Original site: UPF0242 
#=GF ID   UPF0242
#=GF AC   PF06785.12
#=GF DE   Uncharacterised protein family (UPF0242) N-terminus
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   SWISS-PROT
#=GF GA   33.50 33.50;
#=GF TC   33.60 33.90;
#=GF NC   33.40 32.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR009623;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This region includes an N-terminal transmembrane region and a
#=GF CC   C-terminal coiled-coil.
#=GF SQ   21
#=GS A0A0P1N0D7_9BACT/7-166    AC A0A0P1N0D7.1
#=GS S7J4B1_9CHLA/11-224       AC S7J4B1.1
#=GS D6YT85_WADCW/8-197        AC D6YT85.1
#=GS A0A0V0T7E8_9BILA/21-168   AC A0A0V0T7E8.1
#=GS A0A0E2IWR4_CHLPS/6-224    AC A0A0E2IWR4.1
#=GS A0A0V0ZA25_9BILA/21-167   AC A0A0V0ZA25.1
#=GS A0A0U5JAE2_9BACT/19-240   AC A0A0U5JAE2.1
#=GS A0A0V0V557_9BILA/21-167   AC A0A0V0V557.1
#=GS A0A0H5DSR8_9BACT/9-200    AC A0A0H5DSR8.1
#=GS A0A0V1NWT1_9BILA/21-167   AC A0A0V1NWT1.1
#=GS A0A090E0C4_9BACT/9-200    AC A0A090E0C4.1
#=GS A0A182PAL0_9DIPT/584-699  AC A0A182PAL0.1
#=GS A0A0V1LET8_9BILA/37-204   AC A0A0V1LET8.1
#=GS A0A0V1CUQ8_TRIBR/21-167   AC A0A0V1CUQ8.1
#=GS A0A0C1JYI3_9BACT/1-179    AC A0A0C1JYI3.1
#=GS W2UL10_9FLAO/9-175        AC W2UL10.1
#=GS A0A1M5G860_9FLAO/16-158   AC A0A1M5G860.1
#=GS Q6MEU1_PARUW/17-234       AC Q6MEU1.1
#=GS Y616_CHLTR/31-249         AC O84621.1
#=GS A0A078L755_9CHLA/7-194    AC A0A078L755.1
#=GS F8L247_PARAV/8-200        AC F8L247.1
A0A0P1N0D7_9BACT/7-166               ffilitgvwvsfliqgcastaeqediyggvvee-----------------..-------------.-.---.............------....-------------------...----...........--ATEGVDTSYVTTLS...........EENKSLRE.........QIA.KL.QDQNAKLQSE.....................KNELEKNLRSLQESNT...QLTAKISELGQ.......QLEAEKQknrDLSAKLAQYEALPQPGASE-MELRNEIAKRDSEITEYKKQIRDLQAKL-------aeletk.............................................
S7J4B1_9CHLA/11-224                  .......................isqyrnsfff------------TIAY-..CLPISCLPFFPTS.Q.TKY.............SYLIFS....IISSTGWL---FAIGRREK...QLKA..........aTNQLLQKKINKIIEGD...........EGLRQIRD.........SIN.AK.KHESELLKRQnqkllnqmicirdaflkskqdTQQIETTTNLLREENH...RLQLQLDALSQeckektgENQQLSR...ELAETLAYQQALNEEYQATFAEQHSMLDKRQIYIGKLESKVQDLMCEIQNLLQLE...................................................
D6YT85_WADCW/8-197                   .................................RLQLSGLIIALYFASIL..IISIYPDASLL--.-.---.............KFVFGL....FIASVGSILAFLLLRQW--...----...........EKSKLAEQLPLPSSPEpmqnapsfsspENIGELEQ.........ALK.DA.QSKNHDLIQK.....................QNQLEETLHKHEQEKA...QFELKLQDIQH.......QIEAQSL...EADEEIRRKTTLLSEYQETINQQREVIKKKQEQISELESKVRDLNYEVKTLLQLA...................................................
A0A0V0T7E8_9BILA/21-168              ..............................sfv----VTLVWQHFFIEMK..LFTSESFSALS--.-.-WA.............LFSIAF....LLIAAVTLFALLYLIQH-T...EKKV...........EDKKLASTKRKLQNDC...........KPLEEVKE.........IEE.EE.EEEEDDDDEE.....................V---------------...-----------.......-------...-------------------------------------------------------leenkpsflrkrkfqivqsisgpitnqptiltssndsakekareviknalq
A0A0E2IWR4_CHLPS/6-224               ............................kffhp-----IARYHNYLFPIVafLLPLVCLPFLSDS.QkKYS.............YFVFS-....IISLVGWF---FSIGLREK...QLKT..........aAGQLLQTKIRKIIEKD...........EGLRKICE.........SVE.ER.QYESQQLRSQnqkllnqllhvrgvfmktkadMQKLEGLVAHLREENQ...CLQLQLDALSQecrekeeESRELNR...ELAEALAYQQVLNEEYQATFTEQHNMLDVRQVYIGKLESKVQDLMCEIRNLLQLE...................................................
A0A0V0ZA25_9BILA/21-167              ..............................sfv----VTLVWQHFFIEMK..LFTSESFSALS--.-.-WA.............LFSIAF....LLIAAITLFALLYLIQH-T...EKKV...........EDKKLASTKRKLQNDCk........plEEVKEIEE.........EEE.EE.EDDEEVLEENkp.................sfL---------------...-----------.......-------...-------------------------------------------------------rkrkfqivqsisgpitnqptiltssndsakekareviknalqt........
A0A0U5JAE2_9BACT/19-240              .................................RQYLSIAIIFFYLLPLL..FFASYSIGLMSHH.K.SWS.............MLSFGL....LLIACGSLCLILLIYYWEL...ALKEklqteqsklfhQISFNPEKENKVTSLDtshtfpqlidsEPHSIKDDikdlslletNLK.ES.QSEQMRLEEE.....................VQSKSLAIEHLTEENQ...LLSVKAQQTSQ.......DFSDYKL...FSEEQLKQKQLQINLLQQMIEDQRGEMEKRQDQIYQLDTKVHDLSYEIKTLLYLH...................................................
A0A0V0V557_9BILA/21-167              ..............................sfv----VTLVWQHFFIEMK..LFTSESFSALS--.-.-WA.............LFSIAF....LLIAAITLFALLYLIQH-T...EKKV...........EDKKLASTKRKLQNDCk........plEEVKEIEE.........EEE.EE.EDDEEVLEENkp.................sfL---------------...-----------.......-------...-------------------------------------------------------rkrkfqivqsisgpitnqptiltssndsakekareviknalqt........
A0A0H5DSR8_9BACT/9-200               .............................rpll------LTVLFYTLPLS..-LIIGAAGYFGISlY.SSK.............FLSMGL....FVISMGSI-----AIYMEL...RQKV...........SSELPQEELPPVAEEPlvld...flpaEGKESEEA.........ANT.AF.LQLEKELREE.....................IAFRNEEIQRLNQERE...RERVEKELKEE.......ELDSAQR...LFEEKLEEEKLRNIGLQETVSDLKSRLEFKQEEIDKLGGKIRDLTYEIKTLLQI-a..................................................
A0A0V1NWT1_9BILA/21-167              ..............................sfv----VTLVWQHFFIEMK..LFTSESFSALS--.-.-WA.............LFSIAF....LLIAAITLFALLYLIQH-T...EKKV...........EDKKLASTKRKLQNDCk........plEEVKEIEE.........EEE.EE.DDDEELLEENkp.................sfL---------------...-----------.......-------...-------------------------------------------------------rkrkfqivqsisgpitnqptiltssndsakekareviknalqt........
A0A090E0C4_9BACT/9-200               .................................RQSVTISALLVYSAPLI.fVLGFSKNQTFS--.-.SWT.............IFSIAL....LILSAASLIHLSLLFNFYK...NEGEgfe.....gssEKENPDQKEAFLSEER...........---RVELE.........ELE.NL.RAKEEELREE.....................ISYRNEELLRLTREKEfeiSLREQLED---.......DFDRFRK...DSEDRLAEEKILLQEYAENISSLRASLEERQEENERLQSKIRDMAYEIKTLVDLA...................................................
A0A182PAL0_9DIPT/584-699             ...............................sl-----------------..-------------.-.---.............------....-------------------...----...........----------KVKQLE...........EDLRNREE.........YLK.KElEVNASTTQQQ.....................LSEKDTEIARFSEAAE...ELQRQLVATQKq....vkDVSDKIK...QAEEMIAIKTTESQTLEQQITSLRSELGSRDEQIVKLNATISD------------gavr...............................................
A0A0V1LET8_9BILA/37-204              ..........lfplsslfpfhklhfllststff---VVTLIWQHFFIEMK..LFTSESFSALS--.-.-WA.............LFSIAF....LLIAAITLFALLYLIQH-T...EKKV...........EDKKLASTKRKLQNDCk........plEEVKEIEE.........EEEeEE.DDEEEVLEEN.....................----------------...-----------.......-------...-------------------------------------------------------kpsflrkrkfqivqsisgpitnqptiltssndsakekareviknalq....
A0A0V1CUQ8_TRIBR/21-167              ..............................sfv----VTLIWQHFFIEMK..LFTSESFSALS--.-.-WA.............LFSIAF....LLIAAITLFALLYLIQH-T...EKKV...........EDKKLASTKRKLQNDC...........KPLEEVKE.........-IE.EE.EEEEEDDDEE.....................V---------------...-----------.......-------...-------------------------------------------------------leenkpsflrkrkfqivqsisgpitnqptiltssndsakekareviknalq
A0A0C1JYI3_9BACT/1-179               .................................-----------------..---------MPVQ.K.GWN.............LLAFGI....FCSSIGLLGIFWMMCRLSH...KAEHgtrdn.qpsvlEASEFSPKQSNIVELD...........---MTQAK.........ALE.DL.QEQYNELHAQvla..............aqkdLEAKTKELLEREQNNQ...HLQEKLSASAA.......EYEMSKQ...AYESALDQQKLLLDESQKTITEQRECIDKKLQQIAQLEIKVSDLTYEIKTLIQLA...................................................
W2UL10_9FLAO/9-175                   .....................iilmlkkifvgt-----------------..-------------.-.---.............-----V....LIAMASSCVSSKVYNDLESryaKLKQ...........ERNELAAENQELESANnk.......lnNGVRVLQE.........AYD.KV.VAERDQLRQD.....................YEATKSQLTKLQESYD...ALEKQSSSAIA.......ENSRKNR...ELLTQLEEKERVLAEEQARLEQLKSELDSRSQRVNELEG----------------liaskdaamrql.......................................
A0A1M5G860_9FLAO/16-158              ................nscvspkdykslegrha-----------------..-------------.-.---.............------....-------------------...DLKR...........ENRDLQADMEKYKNLE...........EDFSNLEE.........DYK.AA.AAERDRLKDE.....................LASTERSYKNLKNSYD...ALEENSSAAIS.......ENSRQNR...ELLAQLEEKEEALSKEQERLEKLKRDLEARSKRVDELESLI--------------aakdakmn...........................................
Q6MEU1_PARUW/17-234                  .................................RQFFSAAVIFFYLLPLL..FFVTYSIGLMPHQ.K.SWS.............ILTLGL....LLVAIGSICLILLAYYWEI...GLKTkwqgesailssQSSFTSEKENKVTALDpaftlvpleeaPSFTTKEEvt....llnSLE.NL.NDEQRKREEE.....................LALKQSEIQKLVEENQ...SLISQTQQTQQ.......DFADYKL...FSEEQLKQKQLQINFLQQTIEDQRSEMEKRQDQIFHLDTKVHDLSYEIKTLLYLH...................................................
Y616_CHLTR/31-249                    .................................KIHYCISRYFHYLPPVLaiLLPIGSWPFLSEQ.Q.WWYgsflfpvvsslgwLFAIGRrerqLRAAAGQL-----------...----...........----LEAKIRKLTEQD...........EGLKNIRE.........TIE.KR.QKETDRLKLHndklveqlgqarevfiqakgrYDHMEELSRRLKEENQ...QLQIQLEAAVRernekilENQELLQ...ELKETLAYQQELHDEYQATFVEQHSMLDKRQAYIGNLEAKVQDLMCELRNLLQLE...................................................
A0A078L755_9CHLA/7-194               .................................KYKFLLIIFFVYFIPYC..SLAIYNFQYLASE.D.LWN.............ILSIGL....LIPIFGTLLLFYSYLTFQK...NVTL...........QANLIPTDQSVLQELS...........---DQNEQ.........ALL.NV.QEELKILQDL.....................FDAKKQEIEVLTKDNV...GLKKEKEMIAE.......QIKEHKK...EIEAVLEEKEKKFQESILSINDLRATIEKKQNYINQLESKVRDLNYEIKTLLKLA...................................................
F8L247_PARAV/8-200                   .................................RHQLIGLAVALYLIPLF..VLTFMSLQHLPLS.K.SWT.............FLSVGL....FLSLAGSLFLLFVLKGWED...ALKLy.........fENIYIESQKALIPETP..........aEDFAILKQ.........KVE.EL.TEQEELLARE.....................LSQKDTELAEYQNREE...EIK-RLVQISE.......DFAEFRL...EMEQQIEEREQLIHTLRQETHEQKIVLQSKDDRIEDLESQVNDRNYELQTLLKF-s..................................................
#=GC seq_cons                        ......................................hhhh.hahh.hh..hhs..shshhs......Ws.............hhuhuh....llhussoLhhhhhhhth.p...phKh...........psphlsspppKlppts...........EshcplcE.........pl-.ct.pc-pcpLccp.....................lt.hppthtphppptp...tlp.phpth.t.......p.pt.p......tttlt.pp...p..ttphtp.+t.lpt+pt.l.pLpsplpD...............................................................
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