#=GF ID V_cholerae_RfbT
#=GF AC PF05575.15
#=GF DE Vibrio cholerae RfbT protein
#=GF AU Moxon SJ;0000-0003-4644-1816
#=GF SE Pfam-B_8029 (release 8.0)
#=GF GA 27.90 27.90;
#=GF TC 27.90 27.90;
#=GF NC 27.80 27.80;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP Family
#=GF CL CL0063
#=GF RN [1]
#=GF RM 7688846
#=GF RT Mutations in the rfbT gene are responsible for the Ogawa to
#=GF RT inaba serotype conversion in Vibrio cholerae O1.
#=GF RA Ito T, Hiramatsu K, Ohshita Y, Yokota T;
#=GF RL Microbiol Immunol 1993;37:281-288.
#=GF RN [2]
#=GF RM 11035750
#=GF RT Construction of a Vibrio cholerae vaccine candidate using
#=GF RT transposon delivery and FLP recombinase-mediated excision.
#=GF RA Chiang SL, Mekalanos JJ;
#=GF RL Infect Immun 2000;68:6391-6397.
#=GF DR INTERPRO; IPR008890;
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF CC This family consists of several RfbT proteins from Vibrio
#=GF CC cholerae. It has been found that genetic alteration of the rfbT
#=GF CC gene is responsible for serotype conversion of Vibrio cholerae
#=GF CC O1 [1] and determines the difference between the Ogawa and Inaba
#=GF CC serotypes, in that the presence of rfbT is sufficient for
#=GF CC Inaba-to-Ogawa serotype conversion [2].
#=GF SQ 3
#=GS Q9KV97_VIBCH/1-71 AC Q9KV97.1
#=GS Q9KV96_VIBCH/1-227 AC Q9KV96.1
#=GS A0A2S6CV37_9CYAN/70-174 AC A0A2S6CV37.1
Q9KV97_VIBCH/1-71 ...........................................................................MKHLIKNYVQKLIKTELDAIQSKSVHDNRNFIYNGEFLILE.SEFGWHCFPRVQ.LN.HALS.Y..K.NPNC-..------.....-----.---.........-...-....---------...---.-.--.-.-.-.-...-..-..-.-.--.-------....--------..--...--..-..-.-.-...-.-.-.---..-.-----..--.-.-.-.-.......-....-.....-........-...-..--..-..-..-...-.....-......-......-...-.-.............-.-..-...-...-........-..-.....-......-.-....-..-....-....-....-..-.....-....-..-...-...-....-.....-.......-....-....-...-..-...-....-..-----------.-.------.-..--..-..---...-..------.--....-----.------------..--.-------------------------.--------------sgivnl...............................................................................................
Q9KV96_VIBCH/1-227 ........................................................................mtt-----------------------------------------.------------.--.----.-..-.-TNFD..LGMRHW.....IVNHC.KHD.........T...T....YIDIGANVG...TFC.G.IA.A.R.H.I...T..Q..G.K.II.AIEPLTE....MENSIRMN..VQ...LN..N..P.L.V...E.F.H.HFG..C.AIGEN..EG.E.N.I.F.......E....V.....Y........E...F..DN..R..V..S...S.....L......Y......F...Q.K.............N.T..D...I...A........D..K.....V......K.N....S..Q....V....L....V..R.....K....L..S...S...L....D.....I.......S....P....T...N..S...V....V..IKIDAEGAEIE.I.LNQIYE.F..TE..K..HNG...I..EYYICF.EF....AMGHI.QRSNRTFDEIFN..II.NSKFGSKAYFIHPLSSAEHPEFNKA.TQDINGNICFKYVS.....................................................................................................
A0A2S6CV37_9CYAN/70-174 .....................................................iffnptglsslywykptvgskd-----------------------------------------.------------.--.----.-..-.-----..---YEF.....ISSFL.KEG.........D...T....YIDIGANIG...TIL.I.PA.A.K.Y.I...G..K.sG.K.AI.AFEPHPK....TYSYLREN..VD...LN..N..-.L.G...D.V.T.INN..C.AVGNS..DG.Y.I.Y.F.......-....-.....-........-...-..--..-..-..-...-.....-......-......-...-.-.............-.-..-...-...-........-..-.....-......-.-....-..-....-....-....-..-.....-....-..-...-...-....-.....-.......-....-....-...-..-...-....-..-----------.-.------.-..--..-..---...-..------.--....-----.------------..--.-------------------------.--------------tnnd.................................................................................................
#=GC seq_cons .........................................................................ps.....................................................................sNh......hca.....Issah.Kcs.........s...T....YIDIGANlG...Thh.h..A.A.+.a.I...s..p..G.K.hI.AhEPhsc....h.s.lR.N..Vp...LN..N....L.s...-.h.p.h.s..C.AlGps..-G.....h.F....................................................................................................................................................................................................................................................................................................................................................os.s.................................................................................................
//