GenomeNet

Database: Pfam
Entry: Zn_ribbon_recom
LinkDB: Zn_ribbon_recom
Original site: Zn_ribbon_recom 
#=GF ID   Zn_ribbon_recom
#=GF AC   PF13408.8
#=GF DE   Recombinase zinc beta ribbon domain
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Jackhmmer:A3PQ69
#=GF GA   25.30 25.30;
#=GF TC   25.30 25.30;
#=GF NC   25.20 25.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 57096847 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0167
#=GF DR   INTERPRO; IPR025827;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This short bacterial protein contains a zinc ribbon domain that
#=GF CC   is likely to be DNA-binding. This domain is found in site
#=GF CC   specific recombinase proteins. This family appears most closely
#=GF CC   related to Pfam:PF04606.
#=GF SQ   7844
#=GS E3GPA9_9FIRM/296-355        AC E3GPA9.1
#=GS A0A3A8UC71_9BACT/294-355    AC A0A3A8UC71.1
#=GS A0A3T1D1N8_9BACL/284-349    AC A0A3T1D1N8.1
#=GS C7H7K1_9FIRM/315-371        AC C7H7K1.1
#=GS A0A364K8V1_9BACL/291-357    AC A0A364K8V1.1
#=GS A0A136WH77_9FIRM/90-152     AC A0A136WH77.1
#=GS A0A517T264_9BACT/297-358    AC A0A517T264.1
#=GS Q3Z7L5_DEHM1/314-374        AC Q3Z7L5.1
#=GS A0A2H6A949_9BACT/333-391    AC A0A2H6A949.1
#=GS A0A1Y4I057_9FIRM/331-393    AC A0A1Y4I057.1
#=GS A0A417N3M0_9FIRM/307-367    AC A0A417N3M0.1
#=GS R6NG35_9FIRM/300-361        AC R6NG35.1
#=GS A0A1Q8QZW4_9FIRM/120-181    AC A0A1Q8QZW4.1
#=GS A0A2Y9BPV6_9FIRM/314-372    AC A0A2Y9BPV6.1
#=GS A4BLK1_9GAMM/38-102         AC A4BLK1.1
#=GS A0A0W0GHU1_9CHLR/293-355    AC A0A0W0GHU1.1
#=GS D6THG3_9CHLR/41-114         AC D6THG3.1
#=GS A0A1C7G5N7_9FIRM/331-391    AC A0A1C7G5N7.1
#=GS I4YK62_9RHIZ/332-392        AC I4YK62.1
#=GS R5KPZ5_9CLOT/308-368        AC R5KPZ5.1
#=GS A0A3A9EJL8_9FIRM/311-368    AC A0A3A9EJL8.1
#=GS A0A1Y4LD91_9FIRM/312-374    AC A0A1Y4LD91.1
#=GS A0A4D6A2K2_9CAUD/326-389    AC A0A4D6A2K2.1
#=GS A0A511XPN2_9PROT/312-365    AC A0A511XPN2.1
#=GS A0A1W6WG30_9FIRM/314-374    AC A0A1W6WG30.1
#=GS N2ATV3_9FIRM/182-240        AC N2ATV3.1
#=GS A0A371ILM8_9FIRM/239-298    AC A0A371ILM8.1
#=GS A0A3S2XC09_9BACI/271-326    AC A0A3S2XC09.1
#=GS A0A270BKT5_9SPHN/319-381    AC A0A270BKT5.1
#=GS A0A2K4ZLN6_9FIRM/320-384    AC A0A2K4ZLN6.1
#=GS A0A1J0GC96_9CLOT/294-354    AC A0A1J0GC96.1
#=GS A0A2U8UUG7_9CAUD/267-333    AC A0A2U8UUG7.1
#=GS A0A5S9ISI3_9BACT/331-389    AC A0A5S9ISI3.1
#=GS A0A1Y4S0E8_9FIRM/303-365    AC A0A1Y4S0E8.1
#=GS A0A3A8VYT3_9BACT/328-387    AC A0A3A8VYT3.1
#=GS A0A1Y4BIL6_9FIRM/317-380    AC A0A1Y4BIL6.1
#=GS A0A367FTE5_9FIRM/328-392    AC A0A367FTE5.1
#=GS A0A2A2TFC6_9CYAN/334-395    AC A0A2A2TFC6.1
#=GS A0A6I2GS72_9LACT/318-378    AC A0A6I2GS72.1
#=GS A0A133YGD1_9FIRM/314-373    AC A0A133YGD1.1
#=GS A0A4U1JCG1_9DELT/339-399    AC A0A4U1JCG1.1
#=GS A0A1X7MLD7_9GAMM/71-131     AC A0A1X7MLD7.1
#=GS A0A1G9YAW8_9FIRM/327-388    AC A0A1G9YAW8.1
#=GS A0A1I2E9U3_9FIRM/297-358    AC A0A1I2E9U3.1
#=GS A0A419T0H9_9FIRM/341-398    AC A0A419T0H9.1
#=GS A0A1B6BEC7_9FIRM/202-260    AC A0A1B6BEC7.1
#=GS R5ILJ9_9FIRM/357-418        AC R5ILJ9.1
#=GS A0A395YI92_9CLOT/319-377    AC A0A395YI92.1
#=GS A0A4Q7KEP5_9PSEU/303-361    AC A0A4Q7KEP5.1
#=GS A4BP41_9GAMM/314-378        AC A4BP41.1
#=GS A0A4Y7RN70_9FIRM/330-392    AC A0A4Y7RN70.1
#=GS A0A1A3CAL8_9MYCO/303-360    AC A0A1A3CAL8.1
#=GS R6EHD0_9FIRM/113-165        AC R6EHD0.1
#=GS A0A5S9R3Q8_MYCVN/298-356    AC A0A5S9R3Q8.1
#=GS A0A2T0BR19_9CLOT/314-374    AC A0A2T0BR19.1
#=GS A1VJB0_POLNA/329-384        AC A1VJB0.1
#=GS R7JCA8_9FUSO/276-332        AC R7JCA8.1
#=GS A0A1X1T2J5_9MYCO/251-311    AC A0A1X1T2J5.1
#=GS A0A142XYK0_9BACT/294-355    AC A0A142XYK0.1
#=GS A0A2N6ULK9_9ACTO/320-381    AC A0A2N6ULK9.1
#=GS A0A517ZPX0_9BACT/297-359    AC A0A517ZPX0.1
#=GS G9RUQ1_9FIRM/450-512        AC G9RUQ1.1
#=GS A0A1M6DJ36_9CLOT/296-351    AC A0A1M6DJ36.1
#=GS N1ZTR6_9FIRM/318-377        AC N1ZTR6.1
#=GS A0A5M3WE57_9ACTN/332-389    AC A0A5M3WE57.1
#=GS R9N3R2_9FIRM/328-391        AC R9N3R2.1
#=GS C7HAH0_9FIRM/345-405        AC C7HAH0.1
#=GS A0A1Y6K300_9CHLR/326-389    AC A0A1Y6K300.1
#=GS R9M3Z7_9FIRM/316-379        AC R9M3Z7.1
#=GS K4LG05_THEPS/328-384        AC K4LG05.1
#=GS A0A1M9IZJ6_9MYCO/25-82      AC A0A1M9IZJ6.1
#=GS A0A0F2J9V2_9FIRM/84-146     AC A0A0F2J9V2.1
#=GS A0A1C7IF49_9FIRM/305-364    AC A0A1C7IF49.1
#=GS A0A1W1ZNV5_9FIRM/316-377    AC A0A1W1ZNV5.1
#=GS A0A1I0IEP9_9FIRM/96-152     AC A0A1I0IEP9.1
#=GS A0A3A9FHV0_9BACT/307-375    AC A0A3A9FHV0.1
#=GS A0A0F6YHM8_9DELT/280-345    AC A0A0F6YHM8.1
#=GS R9MG05_9FIRM/314-374        AC R9MG05.1
#=GS A0A1Y4NLK8_9FIRM/315-378    AC A0A1Y4NLK8.1
#=GS A0A1K1Q1L7_9FIRM/270-330    AC A0A1K1Q1L7.1
#=GS A0A1Q9VAK4_9PSEU/286-360    AC A0A1Q9VAK4.1
#=GS A0A498R0H2_9MYCO/295-351    AC A0A498R0H2.1
#=GS A0A374X986_9FIRM/309-377    AC A0A374X986.1
#=GS A0A174DVC2_9FIRM/315-377    AC A0A174DVC2.1
#=GS A0A5N8YCJ7_9CHLR/302-360    AC A0A5N8YCJ7.1
#=GS A0A4D6BDH9_9CAUD/313-373    AC A0A4D6BDH9.1
#=GS A0A5C8UN38_9MICO/336-402    AC A0A5C8UN38.1
#=GS A0A096DPE6_9CLOT/329-389    AC A0A096DPE6.1
#=GS K8E1I0_CARML/300-366        AC K8E1I0.2
#=GS A0A1Y4WPF2_9FIRM/312-374    AC A0A1Y4WPF2.1
#=GS K2NYQ3_9RHIZ/290-347        AC K2NYQ3.1
#=GS A0A0C4WSP0_9GAMM/289-348    AC A0A0C4WSP0.1
#=GS A0A2K9P0C3_9FIRM/355-415    AC A0A2K9P0C3.1
#=GS G9RPS4_9FIRM/252-312        AC G9RPS4.1
#=GS A0A1Y4HV27_9FIRM/307-372    AC A0A1Y4HV27.1
#=GS A0A4P6ERG6_9BACL/301-360    AC A0A4P6ERG6.1
#=GS A0A0E4H820_9STRE/305-358    AC A0A0E4H820.1
#=GS A0A413G7V2_9FIRM/331-393    AC A0A413G7V2.1
#=GS A0A402BWJ3_9FIRM/324-380    AC A0A402BWJ3.1
#=GS C6LLZ0_9FIRM/322-382        AC C6LLZ0.1
#=GS A0A2K9V2Y5_9CAUD/283-343    AC A0A2K9V2Y5.1
#=GS V2YGS1_9FIRM/96-153         AC V2YGS1.1
#=GS A0A367GGC0_9FIRM/309-377    AC A0A367GGC0.1
#=GS B7GK96_ANOFW/295-356        AC B7GK96.1
#=GS I4Z380_9RHIZ/329-389        AC I4Z380.1
#=GS R5CRX1_9FIRM/48-109         AC R5CRX1.1
#=GS K4KXV8_9FIRM/306-373        AC K4KXV8.1
#=GS A0A4R2LF21_9FIRM/315-375    AC A0A4R2LF21.1
#=GS A0A1Y4BDB6_9FIRM/273-333    AC A0A1Y4BDB6.1
#=GS A0A3T1DF39_9BACL/18-80      AC A0A3T1DF39.1
#=GS N2A9T7_9FIRM/320-388        AC N2A9T7.1
#=GS R6BSW4_9CLOT/325-387        AC R6BSW4.1
#=GS A0A0D1XEE2_ANEMI/293-362    AC A0A0D1XEE2.1
#=GS G9RRR7_9FIRM/236-301        AC G9RRR7.1
#=GS A0A1G5HZT8_9FIRM/298-368    AC A0A1G5HZT8.1
#=GS R7FV64_9PROT/144-204        AC R7FV64.1
#=GS Q2JB82_FRACC/328-386        AC Q2JB82.1
#=GS A0A101V421_9ACTN/340-403    AC A0A101V421.1
#=GS C7Q6V6_CATAD/9-68           AC C7Q6V6.1
#=GS G4KUG6_OSCVS/167-227        AC G4KUG6.1
#=GS A0A371JGZ6_9FIRM/342-403    AC A0A371JGZ6.1
#=GS A0A1X2BTY8_9MYCO/251-311    AC A0A1X2BTY8.1
#=GS A0A4D6ALD0_9CAUD/281-346    AC A0A4D6ALD0.1
#=GS A0A137SQS0_9FIRM/319-383    AC A0A137SQS0.1
#=GS A0A1Y3Y8B5_9FIRM/319-376    AC A0A1Y3Y8B5.1
#=GS A0A1Q9J7G8_9FIRM/344-406    AC A0A1Q9J7G8.1
#=GS A0A1C7GNM6_9FIRM/316-379    AC A0A1C7GNM6.1
#=GS D7GTS5_9FIRM/290-355        AC D7GTS5.1
#=GS A0A1Y4NAK3_9FIRM/319-387    AC A0A1Y4NAK3.1
#=GS R9MMK2_9FIRM/333-394        AC R9MMK2.1
#=GS A0A4U9RBP0_HATHI/324-387    AC A0A4U9RBP0.1
#=GS A0A081XU46_STRTO/338-396    AC A0A081XU46.1
#=GS A0A410UEN9_9GAMM/320-389    AC A0A410UEN9.1
#=GS A0A4D6A6S4_9CAUD/1-51       AC A0A4D6A6S4.1
#=GS A0A1I6LRR3_9FIRM/279-341    AC A0A1I6LRR3.1
#=GS G7M762_9CLOT/304-367        AC G7M762.1
#=GS Q0AWY2_SYNWW/323-383        AC Q0AWY2.1
#=GS A0A1H0FKI8_9PSEU/301-360    AC A0A1H0FKI8.1
#=GS A0A417N3V4_9FIRM/319-382    AC A0A417N3V4.1
#=GS A6NX88_9FIRM/282-342        AC A6NX88.1
#=GS A0A421BIT7_9RHOB/311-364    AC A0A421BIT7.1
#=GS A0A372SPI1_9FIRM/358-420    AC A0A372SPI1.1
#=GS L1QEY7_9CLOT/1-54           AC L1QEY7.1
#=GS A0A1I4FW37_9BACL/304-359    AC A0A1I4FW37.1
#=GS A0A1H9KCQ7_9BACT/310-371    AC A0A1H9KCQ7.1
#=GS C7H296_9FIRM/319-376        AC C7H296.1
#=GS A0A3A9BX34_9BACT/313-378    AC A0A3A9BX34.1
#=GS R5M3L7_9MOLU/317-379        AC R5M3L7.1
#=GS A0A371ARI1_9FIRM/333-390    AC A0A371ARI1.1
#=GS A0A2M9JC47_9ACTN/338-396    AC A0A2M9JC47.1
#=GS A0A543L094_9MICO/288-342    AC A0A543L094.1
#=GS A0A1Y4APY9_9FIRM/73-135     AC A0A1Y4APY9.1
#=GS A0A421BGT0_9LACT/328-389    AC A0A421BGT0.1
#=GS R5ITE5_9FIRM/308-368        AC R5ITE5.1
#=GS A0A653FRP9_9CAUD/302-358    AC A0A653FRP9.1
#=GS A0A1Z4RCK5_9CYAN/274-331    AC A0A1Z4RCK5.1
#=GS R7A9A5_9CLOT/281-336        AC R7A9A5.1
#=GS A0A1V0GX59_9RHOB/328-383    AC A0A1V0GX59.1
#=GS A0A3A9E4K1_9FIRM/312-374    AC A0A3A9E4K1.1
#=GS A0A1I0F131_9CLOT/192-252    AC A0A1I0F131.1
#=GS A0A1R1I7Y7_9RHOO/301-360    AC A0A1R1I7Y7.1
#=GS A0A109QCB8_9BACL/298-359    AC A0A109QCB8.1
#=GS A0A1S9CS64_9FIRM/326-390    AC A0A1S9CS64.1
#=GS A0A264W4I0_9BACL/915-982    AC A0A264W4I0.1
#=GS A0A2H6AM00_9BACT/287-346    AC A0A2H6AM00.1
#=GS A0A3A8YQ42_9BACT/318-378    AC A0A3A8YQ42.1
#=GS A0A2A2TL07_9CYAN/287-351    AC A0A2A2TL07.1
#=GS A0A2A4FSV8_9SPHN/318-380    AC A0A2A4FSV8.1
#=GS D4CRF0_9FIRM/282-344        AC D4CRF0.1
#=GS A0A2N0EJE4_9ACTN/317-372    AC A0A2N0EJE4.1
#=GS A0A512DZD8_9PROT/152-211    AC A0A512DZD8.1
#=GS A0A1Y4M922_9FIRM/315-375    AC A0A1Y4M922.1
#=GS A0A1Y4RYG5_9FIRM/336-400    AC A0A1Y4RYG5.1
#=GS A0A6I4VSP0_9BACL/299-360    AC A0A6I4VSP0.1
#=GS A0A2U2DW97_9RHIZ/298-355    AC A0A2U2DW97.1
#=GS A0A561QDL3_9BACL/331-385    AC A0A561QDL3.1
#=GS A0A173ZT60_9FIRM/325-390    AC A0A173ZT60.1
#=GS A0A1U7CX42_9BACT/363-427    AC A0A1U7CX42.1
#=GS A0A1W6MY02_9RHIZ/305-367    AC A0A1W6MY02.1
#=GS A0A2W4E794_9RHIZ/299-356    AC A0A2W4E794.1
#=GS A0A1T5MGG1_9CLOT/329-390    AC A0A1T5MGG1.1
#=GS A0A3M7TTM1_9BACI/298-359    AC A0A3M7TTM1.1
#=GS A0A2Z2KT00_9BACL/316-368    AC A0A2Z2KT00.1
#=GS U2MAA9_9FIRM/319-378        AC U2MAA9.1
#=GS A0A2N0ZIX6_9BACI/290-352    AC A0A2N0ZIX6.1
#=GS A0A4V2YPS1_9ACTN/304-366    AC A0A4V2YPS1.1
#=GS A0A1V2H462_9PROT/315-378    AC A0A1V2H462.1
#=GS D9TAM6_MICAI/311-371        AC D9TAM6.1
#=GS A0A3N0HZP2_9FIRM/317-377    AC A0A3N0HZP2.1
#=GS A0A0A3I4Y5_9BACI/290-356    AC A0A0A3I4Y5.1
#=GS A0A417CGV1_9FIRM/305-363    AC A0A417CGV1.1
#=GS A0A2N3XV79_SACSN/288-346    AC A0A2N3XV79.1
#=GS A0A2S7JT29_9BURK/275-347    AC A0A2S7JT29.1
#=GS A0A5C8IBX6_9MICO/347-406    AC A0A5C8IBX6.1
#=GS A0A4D6A837_9CAUD/307-365    AC A0A4D6A837.1
#=GS A0A1M4NBW7_9CLOT/327-388    AC A0A1M4NBW7.1
#=GS A0A0H1R3E6_9RHIZ/326-380    AC A0A0H1R3E6.1
#=GS A0A2A9FF89_9PSEU/321-385    AC A0A2A9FF89.1
#=GS R6CQI5_9FIRM/310-370        AC R6CQI5.1
#=GS R5EAU3_9FIRM/274-333        AC R5EAU3.1
#=GS R9IZR9_9FIRM/311-372        AC R9IZR9.1
#=GS R9MTM2_9FIRM/330-400        AC R9MTM2.1
#=GS A0A4R7KAK0_9CLOT/233-294    AC A0A4R7KAK0.1
#=GS A0A413QPC5_9FIRM/316-378    AC A0A413QPC5.1
#=GS A4J2Z6_DESRM/332-395        AC A4J2Z6.1
#=GS A0A3A8YQX5_9BACT/314-383    AC A0A3A8YQX5.1
#=GS A0A5R9IZ26_9PROT/41-92      AC A0A5R9IZ26.1
#=GS A0A6I4IF93_9SPHI/298-355    AC A0A6I4IF93.1
#=GS A0A371PIZ0_9BACL/299-360    AC A0A371PIZ0.1
#=GS A0A1Y4EFN2_9FIRM/147-207    AC A0A1Y4EFN2.1
#=GS V7IAD3_9CLOT/314-374        AC V7IAD3.1
#=GS R9NCS6_9FIRM/320-384        AC R9NCS6.1
#=GS A0A0G9MP01_9SPHN/311-364    AC A0A0G9MP01.1
#=GS V2YBP3_9FIRM/138-197        AC V2YBP3.1
#=GS A0A2U1BHP1_9FIRM/35-95      AC A0A2U1BHP1.1
#=GS A7IBZ2_XANP2/304-363        AC A7IBZ2.1
#=GS D1PSJ1_9FIRM/83-158         AC D1PSJ1.1
#=GS R6GR38_9FIRM/322-382        AC R6GR38.1
#=GS A0A3A9BWT1_9BACT/318-378    AC A0A3A9BWT1.1
#=GS H1PMJ9_9FIRM/314-376        AC H1PMJ9.1
#=GS Q38184_9CAUD/282-354        AC Q38184.1
#=GS A0A1C7GTG5_9FIRM/156-218    AC A0A1C7GTG5.1
#=GS G2I131_KOMMN/318-371        AC G2I131.1
#=GS A0A143X7C8_9FIRM/169-226    AC A0A143X7C8.1
#=GS A0A345STB9_9ACTN/31-91      AC A0A345STB9.1
#=GS A0A0K8JFP5_9FIRM/241-305    AC A0A0K8JFP5.1
#=GS A0A0S3F2H7_9SPHN/221-294    AC A0A0S3F2H7.1
#=GS B5CQ37_9FIRM/307-375        AC B5CQ37.1
#=GS A0A174CDD0_9FIRM/322-381    AC A0A174CDD0.1
#=GS A0A2S6NFG0_RHOGL/304-363    AC A0A2S6NFG0.1
#=GS A6NYI6_9FIRM/263-323        AC A6NYI6.1
#=GS V2Y8L5_9FIRM/219-281        AC V2Y8L5.1
#=GS R6Y141_9CLOT/282-344        AC R6Y141.1
#=GS R9LL00_9FIRM/320-376        AC R9LL00.1
#=GS A0A501PFQ4_9PROT/49-102     AC A0A501PFQ4.1
#=GS A0A0V8QIU3_9FIRM/328-389    AC A0A0V8QIU3.1
#=GS A0A2L2XG75_9FIRM/306-367    AC A0A2L2XG75.1
#=GS A0A3A9D3R0_9BACT/314-373    AC A0A3A9D3R0.1
#=GS A0A4D6BHQ2_9CAUD/305-360    AC A0A4D6BHQ2.1
#=GS U2LLD6_9FIRM/314-371        AC U2LLD6.1
#=GS R5FGZ6_9FIRM/317-380        AC R5FGZ6.1
#=GS A5Z6W8_9FIRM/280-334        AC A5Z6W8.1
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#=GS A0A1V2YFW8_9FIRM/309-365    AC A0A1V2YFW8.1
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#=GS A0A1Y4IZP2_9FIRM/319-376    AC A0A1Y4IZP2.1
#=GS R7GAG6_9CLOT/302-372        AC R7GAG6.1
#=GS A0A2I2KWR3_9ACTN/306-363    AC A0A2I2KWR3.1
#=GS A0A3R5X1W8_9FIRM/272-332    AC A0A3R5X1W8.1
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#=GS A0A0M7BB70_9RHOB/316-374    AC A0A0M7BB70.1
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