#=GF ID rRNA_proc-arch
#=GF AC PF13234.7
#=GF DE rRNA-processing arch domain
#=GF AU Wood V;0000-0001-6330-7526
#=GF AU Coggill P;0000-0001-5731-1588
#=GF SE Pfam-B_8473 (release 24)
#=GF GA 24.50 19.20;
#=GF TC 24.50 19.20;
#=GF NC 24.40 19.10;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 47079205 -E 1000 --cpu 4 HMM pfamseq
#=GF TP Domain
#=GF RN [1]
#=GF RM 20512111
#=GF RT The crystal structure of Mtr4 reveals a novel arch domain
#=GF RT required for rRNA processing.
#=GF RA Jackson RN, Klauer AA, Hintze BJ, Robinson H, van Hoof A,
#=GF RA Johnson SJ;
#=GF RL EMBO J. 2010;29:2205-2216.
#=GF DR INTERPRO; IPR025696;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF CC Mtr4 is the essential RNA helicase, and is an exosome-activating
#=GF CC cofactor. This arch domain is carried in Mtr4 and Ski2 (the
#=GF CC cytosolic homologue of Mtr4). The arch domain is required for
#=GF CC proper 5.8S rRNA processing, and appears to function
#=GF CC independently of canonical helicase activity [1].
#=GF SQ 3473
#=GS A0A2G8SCK8_9APHY/773-1032 AC A0A2G8SCK8.1
#=GS A0A182FQA6_ANOAL/1268-1563 AC A0A182FQA6.1
#=GS A0A0L8GJ12_OCTBM/571-872 AC A0A0L8GJ12.1
#=GS A0A3Q2IL23_HORSE/545-804 AC A0A3Q2IL23.1
#=GS A0A3Q2DP16_CYPVA/770-1046 AC A0A3Q2DP16.1
#=GS A0A2N5S871_9BASI/791-1073 AC A0A2N5S871.1
#=GS A0A1S4DKT1_TOBAC/519-792 AC A0A1S4DKT1.1
#=GS A0A1I5A6M5_9MICO/487-549 AC A0A1I5A6M5.1
#=GS A0A3Q1G5P9_9TELE/769-1043 AC A0A3Q1G5P9.1
#=GS A0A1S3K3W1_LINUN/775-1061 AC A0A1S3K3W1.1
#=GS A0A371EB29_MUCPR/465-738 AC A0A371EB29.1
#=GS A0A2K6E6E1_MACNE/662-945 AC A0A2K6E6E1.1
#=GS R0IB24_SETT2/817-1088 AC R0IB24.1
#=GS A0A3N0GQ90_9ACTN/499-616 AC A0A3N0GQ90.1
#=GS A0A0X3XQ92_9ACTN/510-628 AC A0A0X3XQ92.1
#=GS A0A3N4JN35_9PEZI/783-1046 AC A0A3N4JN35.1
#=GS A0A3Q2W9C4_HAPBU/729-984 AC A0A3Q2W9C4.1
#=GS A0A2P5SUN5_GOSBA/1-206 AC A0A2P5SUN5.1
#=GS A0A0M5J3K6_DROBS/606-863 AC A0A0M5J3K6.1
#=GS A8PVG7_MALGO/750-1024 AC A8PVG7.1
#=GS A0A1J8Q8Q6_9AGAM/771-1042 AC A0A1J8Q8Q6.1
#=GS A0A316VEE4_9BASI/668-949 AC A0A316VEE4.1
#=GS H2ZE15_CIOSA/454-728 AC H2ZE15.1
#=GS M0UHT3_HORVV/98-362 AC M0UHT3.1
#=GS A0A250XA70_9CHLO/598-874 AC A0A250XA70.1
#=GS A0A3M2RU21_9HYPO/609-888 AC A0A3M2RU21.1
#=GS A0A3Q0EVS2_VIGRR/515-788 AC A0A3Q0EVS2.1
#=GS A0A182XCH6_ANOQN/578-835 AC A0A182XCH6.1
#=GS A0A3P9N4C1_POERE/577-835 AC A0A3P9N4C1.1
#=GS A0A1G6SW70_9ACTN/502-625 AC A0A1G6SW70.1
#=GS A0A2A9NP63_9AGAR/739-1013 AC A0A2A9NP63.1
#=GS A0A0G4LLN3_9PEZI/624-895 AC A0A0G4LLN3.1
#=GS A0A1X7R3C6_9SACH/592-862 AC A0A1X7R3C6.1
#=GS A0A0S6XJQ4_9FUNG/813-1077 AC A0A0S6XJQ4.1
#=GS A0A194PNZ0_PAPXU/564-826 AC A0A194PNZ0.1
#=GS A0A1S3LUF2_SALSA/576-835 AC A0A1S3LUF2.1
#=GS A0A319EA04_ASPSB/616-882 AC A0A319EA04.1
#=GS A0A099NZ86_PICKU/599-870 AC A0A099NZ86.1
#=GS A0A0J8QIX0_COCIT/557-823 AC A0A0J8QIX0.1
#=GS I7ML30_TETTS/630-890 AC I7ML30.2
#=GS A0A3L6TCL5_PANMI/2-110 AC A0A3L6TCL5.1
#=GS A0A2A2YVJ4_9ACTN/510-641 AC A0A2A2YVJ4.1
#=GS A0A0K3CKK7_RHOTO/614-886 AC A0A0K3CKK7.1
#=GS A0A195FDU0_9HYME/722-1005 AC A0A195FDU0.1
#=GS A0A0C3AUA4_9AGAM/756-1030 AC A0A0C3AUA4.1
#=GS Q38AL9_TRYB2/484-746 AC Q38AL9.1
#=GS A0A3P8RMZ7_AMPPE/769-1043 AC A0A3P8RMZ7.1
#=GS A0A3M0IWP8_9ACTN/510-629 AC A0A3M0IWP8.1
#=GS A0A395T214_9HYPO/616-895 AC A0A395T214.1
#=GS W5LXA7_LEPOC/2-98 AC W5LXA7.1
#=GS A0A182KE08_9DIPT/580-837 AC A0A182KE08.1
#=GS A0A1H1Q7F3_9ACTN/484-600 AC A0A1H1Q7F3.1
#=GS A0A150H7Y3_9MICO/479-597 AC A0A150H7Y3.1
#=GS A0A2J6PGJ5_9HELO/816-1080 AC A0A2J6PGJ5.1
#=GS A0A397ZFA1_BRACM/530-786 AC A0A397ZFA1.1
#=GS M7ZWV1_TRIUA/577-843 AC M7ZWV1.1
#=GS A0A2T3Z5S0_9HYPO/558-835 AC A0A2T3Z5S0.1
#=GS A0A3P9AS66_9CICH/553-802 AC A0A3P9AS66.1
#=GS W9ATE6_9MYCO/478-593 AC W9ATE6.1
#=GS T1HDG9_RHOPR/599-853 AC T1HDG9.1
#=GS A0A059MQY6_9NOCA/485-601 AC A0A059MQY6.1
#=GS A0A2C9U3J8_MANES/526-785 AC A0A2C9U3J8.1
#=GS A0A2H5QG96_CITUN/47-165 AC A0A2H5QG96.1
#=GS A0A286UEZ1_9AGAM/605-877 AC A0A286UEZ1.1
#=GS A0A1E3IBR0_9TREE/601-868 AC A0A1E3IBR0.1
#=GS A0A0B2UVG3_TOXCA/166-243 AC A0A0B2UVG3.1
#=GS A0A427Y934_9TREE/603-870 AC A0A427Y934.1
#=GS A0A2R2W8H9_9MICO/502-566 AC A0A2R2W8H9.1
#=GS A0A428STU6_9HYPO/232-497 AC A0A428STU6.1
#=GS F6H9Z0_VITVI/524-796 AC F6H9Z0.1
#=GS A0A1C4PMA0_9ACTN/492-595 AC A0A1C4PMA0.1
#=GS A0A0L1IUZ0_ASPNO/612-878 AC A0A0L1IUZ0.1
#=GS A0A197SW68_9ACTN/502-627 AC A0A197SW68.1
#=GS D7FJL2_ECTSI/1060-1429 AC D7FJL2.1
#=GS C5DRL1_ZYGRC/594-864 AC C5DRL1.1
#=GS G2QMF0_MYCTT/831-1097 AC G2QMF0.1
#=GS A0A239VLM6_9MICO/525-599 AC A0A239VLM6.1
#=GS A0A0B4H9J4_METMF/615-896 AC A0A0B4H9J4.1
#=GS A0A420H8U3_9PEZI/613-879 AC A0A420H8U3.1
#=GS E1ZCF7_CHLVA/1070-1214 AC E1ZCF7.1
#=GS A0A022QEQ0_ERYGU/531-795 AC A0A022QEQ0.1
#=GS A0A3Q1INB4_ANATE/577-835 AC A0A3Q1INB4.1
#=GS Q6CLP8_KLULA/602-872 AC Q6CLP8.1
#=GS B4HXS8_DROSE/594-850 AC B4HXS8.1
#=GS A0A2U4AUS3_TURTR/673-841 AC A0A2U4AUS3.1
#=GS A0A197K2T8_9FUNG/545-824 AC A0A197K2T8.1
#=GS A0A2C6AG10_9HYPO/807-1072 AC A0A2C6AG10.1
#=GS A0A238FNJ5_9BASI/637-907 AC A0A238FNJ5.1
#=GS A0A2P6V2V8_9CHLO/820-1109 AC A0A2P6V2V8.1
#=GS Q4N4X3_THEPA/553-810 AC Q4N4X3.1
#=GS B4G507_DROPE/713-999 AC B4G507.1
#=GS A0A182GDG8_AEDAL/708-990 AC A0A182GDG8.1
#=GS A0A2K5NNS1_CERAT/582-841 AC A0A2K5NNS1.1
#=GS A0A0M2H508_9MICO/512-583 AC A0A0M2H508.1
#=GS A0A369GJK6_9HYPO/613-891 AC A0A369GJK6.1
#=GS A0A1Q5K5T1_9ACTN/510-637 AC A0A1Q5K5T1.1
#=GS A0A319EH25_ASPSB/823-1088 AC A0A319EH25.1
#=GS F0X6U7_GROCL/625-931 AC F0X6U7.1
#=GS A0A094APX3_9PEZI/612-879 AC A0A094APX3.1
#=GS I0YMM7_COCSC/561-836 AC I0YMM7.1
#=GS A0A1D8PRD5_CANAL/594-861 AC A0A1D8PRD5.1
#=GS A0A1Y2LIW1_EPING/614-878 AC A0A1Y2LIW1.1
#=GS A0A1C7MP23_GRIFR/740-1013 AC A0A1C7MP23.1
#=GS A0A1Y2J3C5_PYCCO/603-875 AC A0A1Y2J3C5.1
#=GS A0A1H8RIQ3_9ACTN/497-620 AC A0A1H8RIQ3.1
#=GS A0A067CLG9_SAPPC/808-1092 AC A0A067CLG9.1
#=GS A0A2N9JGU9_9ACTN/484-636 AC A0A2N9JGU9.1
#=GS H9J6M6_BOMMO/750-1036 AC H9J6M6.1
#=GS A0A427YG63_9TREE/592-859 AC A0A427YG63.1
#=GS B4HBZ1_DROPE/563-760 AC B4HBZ1.1
#=GS A0A0X3VWJ9_9ACTN/499-618 AC A0A0X3VWJ9.1
#=GS A0A146FH86_9EURO/619-885 AC A0A146FH86.1
#=GS A0A2R6Q6N9_ACTCH/519-792 AC A0A2R6Q6N9.1
#=GS A0A1J8PUD4_9AGAM/586-858 AC A0A1J8PUD4.1
#=GS A0A1C1CCE0_9EURO/791-1056 AC A0A1C1CCE0.1
#=GS R7UXM7_CAPTE/197-454 AC R7UXM7.1
#=GS D8PMN8_SCHCM/651-920 AC D8PMN8.1
#=GS M3YGN2_MUSPF/763-1046 AC M3YGN2.1
#=GS A0A397STV8_9GLOM/785-1061 AC A0A397STV8.1
#=GS A0A316YSR0_9BASI/856-1120 AC A0A316YSR0.1
#=GS A0A218YTH6_9HELO/816-1068 AC A0A218YTH6.1
#=GS W2S5Q0_9EURO/790-1055 AC W2S5Q0.1
#=GS A0A2K6LI04_RHIBE/763-1046 AC A0A2K6LI04.1
#=GS A0A0D2GXI9_9EURO/791-1077 AC A0A0D2GXI9.1
#=GS N6WCE6_9ACTO/502-584 AC N6WCE6.1
#=GS M7TWD4_BOTF1/811-1074 AC M7TWD4.1
#=GS G0NUK0_CAEBE/564-819 AC G0NUK0.1
#=GS A0A366ZNZ4_9ACTN/503-617 AC A0A366ZNZ4.1
#=GS A0A1C9WTY0_9MICC/530-654 AC A0A1C9WTY0.1
#=GS A0A1Y1YIH8_9FUNG/588-860 AC A0A1Y1YIH8.1
#=GS A0A2N3NH41_9PEZI/599-879 AC A0A2N3NH41.1
#=GS Q6BY98_DEBHA/775-1039 AC Q6BY98.2
#=GS A0A445D9U6_ARAHY/520-793 AC A0A445D9U6.1
#=GS A0A212F1T4_DANPL/759-1045 AC A0A212F1T4.1
#=GS A0A2G5EUU7_AQUCA/431-703 AC A0A2G5EUU7.1
#=GS A0A2L2BQN6_9MICO/497-568 AC A0A2L2BQN6.1
#=GS A6REV7_AJECN/830-1095 AC A6REV7.1
#=GS A0A0L0H5I4_SPIPD/608-878 AC A0A0L0H5I4.1
#=GS A0A158PQ88_BRUPA/792-1107 AC A0A158PQ88.1
#=GS A0A1G8B8C7_9MICO/517-592 AC A0A1G8B8C7.1
#=GS A0A1Q3EJP3_LENED/704-976 AC A0A1Q3EJP3.1
#=GS K1RQY2_CRAGI/730-1012 AC K1RQY2.1
#=GS A0A482SLL0_9ARCH/451-742 AC A0A482SLL0.1
#=GS E6ZWU6_SPORE/640-918 AC E6ZWU6.1
#=GS A0A453AZT0_AEGTS/538-804 AC A0A453AZT0.1
#=GS G5C3H3_HETGA/790-1063 AC G5C3H3.1
#=GS A0A1X7UR54_AMPQE/501-753 AC A0A1X7UR54.1
#=GS A0A171DUQ9_9MICO/504-575 AC A0A171DUQ9.1
#=GS A0A421JF47_9ASCO/590-859 AC A0A421JF47.1
#=GS A0A3L6PCW9_PANMI/555-823 AC A0A3L6PCW9.1
#=GS V4RQL0_9ROSI/523-795 AC V4RQL0.1
#=GS A0A1U7UM76_TARSY/763-1046 AC A0A1U7UM76.1
#=GS A0A0V0YAY3_TRIPS/587-849 AC A0A0V0YAY3.1
#=GS A0A200R4P7_9MAGN/840-1141 AC A0A200R4P7.1
#=GS G0VKU7_NAUCC/833-1094 AC G0VKU7.1
#=GS L0AX21_THEEQ/521-784 AC L0AX21.1
#=GS A0A1Y2W349_9PEZI/621-895 AC A0A1Y2W349.1
#=GS G0S0S6_CHATD/818-1084 AC G0S0S6.1
#=GS A0A0Q8NT25_9ACTN/510-651 AC A0A0Q8NT25.1
#=GS A0A183S0V8_9TREM/63-144 AC A0A183S0V8.1
#=GS T0LT54_COLGC/808-1058 AC T0LT54.1
#=GS A0A0V1P756_9BILA/581-843 AC A0A0V1P756.1
#=GS L1J3J5_GUITC/580-851 AC L1J3J5.1
#=GS M1B2J7_SOLTU/530-794 AC M1B2J7.1
#=GS A0A453AZU7_AEGTS/538-804 AC A0A453AZU7.1
#=GS A0A0D2VS67_CAPO3/855-1127 AC A0A0D2VS67.1
#=GS A4RZ28_OSTLU/469-732 AC A4RZ28.1
#=GS A0A3B6PKM1_WHEAT/767-1013 AC A0A3B6PKM1.1
#=GS S8EEM4_FOMPI/774-1040 AC S8EEM4.1
#=GS A0A0D3CLM8_BRAOL/533-789 AC A0A0D3CLM8.1
#=GS A0A0L9TD04_PHAAN/522-795 AC A0A0L9TD04.1
#=GS Q6CWL5_KLULA/788-979 AC Q6CWL5.1
#=GS A0A4D9AY41_SALSN/806-881 AC A0A4D9AY41.1
#=GS A0A1M2VLJ0_TRAPU/779-1057 AC A0A1M2VLJ0.1
#=GS A0A0L0SX62_ALLM3/622-912 AC A0A0L0SX62.1
#=GS A0A482VEJ0_9CUCU/719-1005 AC A0A482VEJ0.1
#=GS A0A1R1IJ38_9ACTN/496-620 AC A0A1R1IJ38.1
#=GS A0A3L6QJ26_PANMI/868-1168 AC A0A3L6QJ26.1
#=GS A0A1H4XK46_9ACTN/510-646 AC A0A1H4XK46.1
#=GS A0A067M8F2_9AGAM/802-1074 AC A0A067M8F2.1
#=GS A0A074T0J4_HAMHA/694-991 AC A0A074T0J4.1
#=GS D7LA79_ARALL/529-782 AC D7LA79.1
#=GS A0A2G4SQ17_RHIZD/778-1048 AC A0A2G4SQ17.1
#=GS H1UY38_COLHI/814-1079 AC H1UY38.1
#=GS D6YBH2_THEBD/480-637 AC D6YBH2.1
#=GS A0A2G2WI01_CAPBA/856-1154 AC A0A2G2WI01.1
#=GS A0A1T4T5I3_9ACTN/524-630 AC A0A1T4T5I3.1
#=GS A0A1V6NUI8_9EURO/613-879 AC A0A1V6NUI8.1
#=GS T1GDC1_MEGSC/656-913 AC T1GDC1.1
#=GS K9FZ32_PEND2/834-1102 AC K9FZ32.1
#=GS A0A2T3AGG8_9PEZI/561-833 AC A0A2T3AGG8.1
#=GS B9QGC5_TOXGV/689-986 AC B9QGC5.1
#=GS A0A163CBR2_DIDRA/691-955 AC A0A163CBR2.1
#=GS A0A166CCW7_9AGAM/602-874 AC A0A166CCW7.1
#=GS M9LV95_PSEA3/821-1084 AC M9LV95.1
#=GS A0A3Q2X994_HAPBU/768-1042 AC A0A3Q2X994.1
#=GS A0A3N1HSN2_9ACTN/550-716 AC A0A3N1HSN2.1
#=GS W2LMM6_PHYPR/909-1258 AC W2LMM6.1
#=GS A0A3B3YBM4_9TELE/770-1046 AC A0A3B3YBM4.1
#=GS A0A2V1CFF9_9HELO/608-875 AC A0A2V1CFF9.1
#=GS A0A0Q8PKR4_9ACTN/510-629 AC A0A0Q8PKR4.1
#=GS A0A0B2WPA5_METAS/615-893 AC A0A0B2WPA5.1
#=GS G6FS94_9CYAN/455-527 AC G6FS94.1
#=GS A0A3G6ZMC3_9MICO/506-579 AC A0A3G6ZMC3.1
#=GS A0A162ALL9_DAUCS/519-791 AC A0A162ALL9.1
#=GS A0A0L9VBS1_PHAAN/37-336 AC A0A0L9VBS1.1
#=GS A0A0D2H404_9EURO/603-868 AC A0A0D2H404.1
#=GS A0A165NWR5_EXIGL/570-843 AC A0A165NWR5.1
#=GS A0A443HU69_BYSSP/828-1094 AC A0A443HU69.1
#=GS A0A182P3C4_9DIPT/579-836 AC A0A182P3C4.1
#=GS A0A067NTR0_PLEOS/93-357 AC A0A067NTR0.1
#=GS A0A2I0HKZ5_PUNGR/814-1056 AC A0A2I0HKZ5.1
#=GS A0A2N3YES1_9MICO/507-674 AC A0A2N3YES1.1
#=GS A0A1H3P7H0_9ACTN/498-614 AC A0A1H3P7H0.1
#=GS A0A0F6QZJ6_9CORY/484-610 AC A0A0F6QZJ6.1
#=GS J4KQ31_BEAB2/618-896 AC J4KQ31.1
#=GS A0A182IKE9_9DIPT/986-1277 AC A0A182IKE9.1
#=GS A0A158PJZ7_ANGCS/176-357 AC A0A158PJZ7.1
#=GS A0A094EVJ8_9PEZI/814-1077 AC A0A094EVJ8.1
#=GS A0A2W1GPB1_9PLEO/817-1081 AC A0A2W1GPB1.1
#=GS A0A367YI20_9ASCO/552-607 AC A0A367YI20.1
#=GS S8AS24_PENO1/833-1098 AC S8AS24.1
#=GS A0A031FXJ5_9MICO/502-576 AC A0A031FXJ5.1
#=GS A0A2S8LE96_9MYCO/482-620 AC A0A2S8LE96.1
#=GS A0A1D6H182_MAIZE/865-1164 AC A0A1D6H182.1
#=GS W6ZE34_COCMI/595-859 AC W6ZE34.1
#=GS A0A1F7ZKA6_9EURO/612-878 AC A0A1F7ZKA6.1
#=GS A0A080WFM9_TRIRC/14-279 AC A0A080WFM9.1
#=GS A0A2H0ZPD4_CANAR/591-860 AC A0A2H0ZPD4.1
#=GS W5MVR2_LEPOC/570-831 AC W5MVR2.1
#=GS A0A0P7BP41_9HYPO/612-890 AC A0A0P7BP41.1
#=GS L0P8Z5_PNEJ8/914-1132 AC L0P8Z5.1
#=GS A0A0R3RY68_9BILA/764-1077 AC A0A0R3RY68.1
#=GS A0A0S3QX82_PHAAN/529-779 AC A0A0S3QX82.1
#=GS A0A2H3YFT9_PHODC/535-800 AC A0A2H3YFT9.1
#=GS V7CQ38_PHAVU/530-780 AC V7CQ38.1
#=GS A0A3Q3CKI2_HAPBU/553-802 AC A0A3Q3CKI2.1
#=GS W9HHU3_9HYPO/611-892 AC W9HHU3.1
#=GS A0A0R3UIV4_9CEST/569-875 AC A0A0R3UIV4.1
#=GS A0A1U8CS48_MESAU/819-1089 AC A0A1U8CS48.1
#=GS A0A498KA79_MALDO/813-1112 AC A0A498KA79.1
#=GS A0A0A1CSM9_9MICC/526-638 AC A0A0A1CSM9.1
#=GS K8EJ19_9CHLO/615-900 AC K8EJ19.1
#=GS G0RLR6_HYPJQ/618-896 AC G0RLR6.1
#=GS A0A2G5EUU4_AQUCA/431-703 AC A0A2G5EUU4.1
#=GS A0A1D6H195_MAIZE/764-1063 AC A0A1D6H195.1
#=GS A0A2I3MX79_PAPAN/582-841 AC A0A2I3MX79.1
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