GenomeNet

Database: Pfam
Entry: zf-WRNIP1_ubi
LinkDB: zf-WRNIP1_ubi
Original site: zf-WRNIP1_ubi 
#=GF ID   zf-WRNIP1_ubi
#=GF AC   PF18279.1
#=GF DE   Werner helicase-interacting protein 1 ubiquitin-binding domain
#=GF AU   Smart A;0000-0002-6965-5633
#=GF SE   ECOD:EUF05505
#=GF GA   26.40 26.40;
#=GF TC   26.40 26.50;
#=GF NC   25.90 26.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 45638612 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   27062441
#=GF RT   A novel mode of ubiquitin recognition by the ubiquitin-binding
#=GF RT   zinc finger domain of WRNIP1.
#=GF RA   Suzuki N, Rohaim A, Kato R, Dikic I, Wakatsuki S, Kawasaki M;
#=GF RL   FEBS J. 2016;283:2004-2017.
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is found in the Werner helicase-interacting protein
#=GF CC   1 present in Homo sapiens. The domain is a zinc finger
#=GF CC   responsible and has a zinc-coordinating B-B-A fold. WRNIP1 UBZ
#=GF CC   binds ubiquitin in a similar manner to Rad18 UBZ [1].
#=GF SQ   35
#=GS H0XWP8_OTOGA/16-36      AC H0XWP8.1
#=GS A0A2K5NMP7_CERAT/16-36  AC A0A2K5NMP7.1
#=GS F6PFR8_MONDO/16-36      AC F6PFR8.1
#=GS WRIP1_MOUSE/16-36       AC Q91XU0.2
#=GS WRIP1_RAT/16-36         AC Q8CG07.1
#=GS A0A1A6FU80_NEOLE/16-36  AC A0A1A6FU80.1
#=GS G3TDI9_LOXAF/16-36      AC G3TDI9.1
#=GS G3GWX5_CRIGR/16-36      AC G3GWX5.1
#=GS F7DJS2_MONDO/16-36      AC F7DJS2.1
#=GS A0A1S2ZNU5_ERIEU/16-36  AC A0A1S2ZNU5.1
#=GS L5JTY9_PTEAL/16-36      AC L5JTY9.1
#=GS WRIP1_HUMAN/16-36       AC Q96S55.2
#=GS WRIP1_HUMAN/16-36       DR PDB; 3VHS A; 17-36;
#=GS WRIP1_HUMAN/16-36       DR PDB; 3VHS B; 17-36;
#=GS WRIP1_HUMAN/16-36       DR PDB; 3VHT B; 240-260;
#=GS K7BSN9_PANTR/16-36      AC K7BSN9.1
#=GS F1RWX5_PIG/16-36        AC F1RWX5.2
#=GS F6PFS1_MONDO/16-36      AC F6PFS1.1
#=GS G3RNP9_GORGO/16-36      AC G3RNP9.2
#=GS H2PHR3_PONAB/16-36      AC H2PHR3.2
#=GS G1PHQ9_MYOLU/16-36      AC G1PHQ9.1
#=GS A0A096NKJ5_PAPAN/2-22   AC A0A096NKJ5.2
#=GS A0A1S3F8I2_DIPOR/16-36  AC A0A1S3F8I2.1
#=GS F7D6S4_CALJA/16-36      AC F7D6S4.1
#=GS M3XMW4_MUSPF/16-36      AC M3XMW4.1
#=GS A0A1U7Q3R3_MESAU/16-36  AC A0A1U7Q3R3.1
#=GS R9PXV8_RAT/16-36        AC R9PXV8.1
#=GS A0A1S2ZNT2_ERIEU/16-36  AC A0A1S2ZNT2.1
#=GS RAD18_YARLI/145-165     AC Q6CHI1.1
#=GS A0A0Q3PS38_AMAAE/8-28   AC A0A0Q3PS38.1
#=GS G1LAA4_AILME/16-36      AC G1LAA4.1
#=GS F7DPJ8_CALJA/16-36      AC F7DPJ8.1
#=GS F7D6V3_CALJA/16-36      AC F7D6V3.1
#=GS I3MSA6_ICTTR/16-36      AC I3MSA6.1
#=GS A0A1S3F685_DIPOR/16-36  AC A0A1S3F685.1
#=GS F7DMV3_MACMU/16-36      AC F7DMV3.1
#=GS A0A0D9R4D2_CHLSB/16-36  AC A0A0D9R4D2.1
#=GS A0A151NFA4_ALLMI/14-34  AC A0A151NFA4.1
H0XWP8_OTOGA/16-36                 ..HQVQCPVCQQMMPAAHINSHL
A0A2K5NMP7_CERAT/16-36             ..HQVQCPVCQQMMPAAHINSHL
F6PFR8_MONDO/16-36                 ..HQVQCPVCQQALPAAHINAHL
WRIP1_MOUSE/16-36                  ..HQVQCPVCQQMMPAAHINSHL
WRIP1_RAT/16-36                    ..HQVQCPVCQQMMPAAHINSHL
A0A1A6FU80_NEOLE/16-36             ..HQVQCPVCQQMMPAAHINSHL
G3TDI9_LOXAF/16-36                 ..HQVQCPVCQQMMPAAHINSHL
G3GWX5_CRIGR/16-36                 ..HQVQCPVCQQMMPAAHINSHL
F7DJS2_MONDO/16-36                 ..HQVQCPVCQQALPAAHINAHL
A0A1S2ZNU5_ERIEU/16-36             ..HQVQCPVCQQMMPAAHINSHL
L5JTY9_PTEAL/16-36                 ..HQVQCPVCQQMMPAAHINSHL
WRIP1_HUMAN/16-36                  ..HQVQCPVCQQMMPAAHINSHL
#=GR WRIP1_HUMAN/16-36       SS    ..SEEE-TTT--EEEGGGHHHHH
K7BSN9_PANTR/16-36                 ..HQVQCPVCQQMMPAAHINSHL
F1RWX5_PIG/16-36                   ..HRVQCPVCQQAMPAAHINSHL
F6PFS1_MONDO/16-36                 ..HQVQCPVCQQALPAAHINAHL
G3RNP9_GORGO/16-36                 ..HQVQCPVCQQMMPAAHINSHL
H2PHR3_PONAB/16-36                 ..HQVQCPVCQQMMPAAHINSHL
G1PHQ9_MYOLU/16-36                 ..HQVQCPVCQQMMPAAHINSHL
A0A096NKJ5_PAPAN/2-22              ..HQVQCPVCQQMMPAAHINSHL
A0A1S3F8I2_DIPOR/16-36             ..HQVQCPVCQQMMPAAHINSHL
F7D6S4_CALJA/16-36                 ..HQVQCPVCQQMMPAAHINSHL
M3XMW4_MUSPF/16-36                 ..HQVQCPVCQQMMPAAHINSHL
A0A1U7Q3R3_MESAU/16-36             ..HQVQCPVCQQMMPAAHINSHL
R9PXV8_RAT/16-36                   ..HQVQCPVCQQMMPAAHINSHL
A0A1S2ZNT2_ERIEU/16-36             ..HQVQCPVCQQMMPAAHINSHL
RAD18_YARLI/145-165                .i-QVECPVCQAMLPGAAINRHL
A0A0Q3PS38_AMAAE/8-28              ql--VRCPVCLRELPGAHINSHL
G1LAA4_AILME/16-36                 ..HQVQCPVCQQMMPAAHINSHL
F7DPJ8_CALJA/16-36                 ..HQVQCPVCQQMMPAAHINSHL
F7D6V3_CALJA/16-36                 ..HQVQCPVCQQMMPAAHINSHL
I3MSA6_ICTTR/16-36                 ..HQVQCPVCQQMMPAAHINSHL
A0A1S3F685_DIPOR/16-36             ..HQVQCPVCQQMMPAAHINSHL
F7DMV3_MACMU/16-36                 ..HQVQCPVCQQMMPAAHINSHL
A0A0D9R4D2_CHLSB/16-36             ..HQVQCPVCQQMMPAAHINSHL
A0A151NFA4_ALLMI/14-34             .a-RVQCPVCALELPASHINAHL
#=GC SS_cons                       ..SEEE-TTT--EEEGGGHHHHH
#=GC seq_cons                      ..HQVQCPVCQQMMPAAHINSHL
//
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