KEGG   Pseudomonas synxantha LBUM223: VO64_0113
Entry
VO64_0113         CDS       T03769                                 
Name
(GenBank) Ribonucleotide reductase of class Ia (aerobic), beta subunit
  KO
K00526  ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Organism
pfb  Pseudomonas synxantha LBUM223
Pathway
pfb00230  Purine metabolism
pfb00240  Pyrimidine metabolism
pfb01100  Metabolic pathways
pfb01232  Nucleotide metabolism
Module
pfb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
pfb_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:pfb00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    VO64_0113
   00240 Pyrimidine metabolism
    VO64_0113
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfb03400]
    VO64_0113
Enzymes [BR:pfb01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     VO64_0113
DNA repair and recombination proteins [BR:pfb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    VO64_0113
SSDB
Motif
Pfam: Ribonuc_red_sm PPP5
Other DBs
NCBI-ProteinID: AKA80659
Position
complement(138486..139736)
AA seq 416 aa
MLSWDEVDNEDTGAAVIKGANAGHASEANMDRLDGAGAAAAIEARAVTASDSAAIVRAKA
ALDKLDVAEGLAELEGASARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMP
QEVNMTADIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQY
ILRQAFEEAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFET
GTVDTDKELLRNLVAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLN
FGIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYL
KFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALSWD
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgctgagttgggatgaagtcgacaacgaagacaccggtgcagcggtgatcaagggcgcc
aacgccggccatgcgagcgaagccaacatggaccgcctcgacggtgccggcgccgccgcc
gccatcgaagcccgcgccgtcactgccagtgattcggccgccatcgtgcgcgccaaggct
gccctggacaaactcgacgtcgccgaaggcctcgccgaactcgaaggcgcctccgcccgc
gtcgccgtcgacgaaaagcgcatgatcaactgccgcgccgacctcaaccagctcgtaccc
ttcaagtacgactgggcctggcagaaatacctcgacggctgcgccaaccactggatgccg
caagaggtcaacatgaccgccgacatcgccctgtggaaaaaccccgaaggcctgaccgac
gacgaacgccgcatcgtcatgcgcaacctcggcttcttctccaccgccgactcgttggtc
gccaacaacctggtgctggccgtgtaccgcctgatcaccaacccggaatgccgccagtac
atcctgcgccaagccttcgaagaggcgatccacacccacgcctaccagtactgcatcgaa
tccctggccatggatgaaggcgagatcttcaacatgtaccacgagattccatcggtcgcc
aaaaaggcagcctggggcctgaagtacacccgctcgatctccgatccgaagttcgaaacc
ggcactgtcgacaccgacaaggaactgctgcgcaacctggtcgcctactactgcgtactg
gaaggcatcttcttctactgcggcttcacccagatcctgtccatgggccgtcgcaacaaa
atgaccggcgtggccgagcagttccagtacatcctgcgcgacgagtcgatgcacctgaac
ttcggtatcgatgtgatcaaccagatcaaaatcgaaaacccgcacttgtgggatgccgag
atgaaggaagaagcgacccagatgattttgcaggggacgcagctggagattgaatacgct
cgtgacaccatgccgcgcggtgtgttgggcatgaatgcggcgatgatggaggattacctc
aagttcattgctaaccgtcgtttgtcgcagattggcttgaaggaagagtacccaggcacg
actaacccgttcccgtggatgagcgagatcatggacttgaagaaagagaaaaacttcttc
gaaacccgcgtgatcgagtatcagacgggtggggcgttgagctgggattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system