KEGG T03769: VO64

Pseudomonas synxantha LBUM223: VO64_1720

Entry

VO64_1720         CDS       T03769

Name

(GenBank) Ribosomal large subunit pseudouridine synthase B

K06178

23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]

Organism

pfb Pseudomonas synxantha LBUM223

Brite

KEGG Orthology (KO) [BR:pfb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pfb03009]
    VO64_1720
Enzymes [BR:pfb01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     VO64_1720
Ribosome biogenesis [BR:pfb03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    VO64_1720

SSDB

Motif

Pfam:

PseudoU_synth_2 S4

Other DBs

NCBI-ProteinID:

AKA82266

Position

complement(1908659..1909879)

AA seq 406 aa
MNDQDQKDQEIGPAGEKLQKVLARIGVGSRRDVEAWITQKRIKVNGVEATLGQRVDLHDA
ITIDGKVIKREEAAESVRRVIMYNKPDGEICTRDDPEGRPTVFDKMPKPKEGRWINIGRL
DINTTGLLMFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVVLEDGPAKF
TDIKQAPGGEGFNHWYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLNSDLPMGR
WREMSQYEVDILSAEVGLTPVAMPQMNAKSKDKLERMQRKSSRPVARTERVARTLRPALN
APATGGRISREPQIEGERRPTAPSRQEGERAPRTPRPARGEAPSGGRSNRGEADRPADSA
STKRPAKPAANKRPGPKLVADEPSGKRRGAPAGSGQRPGFGRKKPQ

NT seq 1221 nt +upstreamnt +downstreamnt
atgaatgaccaagaccagaaagaccaggaaatcggcccagcaggcgaaaagctgcaaaaa
gtgctggcgcgtatcggcgtgggctcgcgccgcgacgtcgaagcctggatcacccagaag
cgcatcaaggtcaacggcgtcgaggcaaccctcggccagcgtgtcgacctgcacgatgca
atcaccatcgatggcaaggtgatcaagcgtgaagaggctgccgaatcggtgcgccgcgtg
atcatgtacaacaagcccgatggcgaaatctgcacccgtgacgacccggaaggccgtccg
accgtgttcgacaagatgcccaagcccaaggaaggccgctggatcaacatcggccgcctg
gacatcaacaccaccggcttgctgatgttcaccactgacggggaactggccaaccgcctg
atgcacccgtcctacgagatggaccgtgaatacgccgtgcgtgtacgtggtgaagtcgat
gacgagatgatcgaacgcctcaaggccggcgtggtgctggaagacggcccggccaagttc
accgatatcaagcaggccccaggcggtgaaggtttcaaccattggtaccactgcgtggtg
atggaaggccgcaaccgtgaagtgcgccgcctgtgggaatcccaggggctggtggtcagc
cgcttgaaacgcgtgcgtttcggcccggtgttcctgaactccgacctgccgatgggccgc
tggcgcgaaatgagccagtacgaagtcgacatcctcagtgccgaagtcggcctgacgccg
gtcgcgatgccgcagatgaatgccaagagcaaggacaagcttgagcgtatgcagcgcaaa
tcctcgcgcccggtagcgcgtaccgagcgcgtggcccgtaccctgcgcccggcgctgaat
gccccggccactggcggtcgtatctcccgtgagccgcagatcgaaggtgagcgtcgccct
accgcaccgtcccgtcaggaaggtgagcgtgcgccccgcacaccacgtcctgctcgtggc
gaagcgccaagcggtggtcgcagcaaccgtggtgaagcggatcgcccggccgacagcgcc
agtaccaagcgtccagccaagccagcggcgaacaagcgccctggcccgaaactggtagcc
gatgagccatcgggcaagcgccgcggcgccccggctggttccggccagcgtccgggtttt
ggtcgcaagaagccgcagtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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