KEGG   Pseudomonas synxantha LBUM223: VO64_4666
Entry
VO64_4666         CDS       T03769                                 
Name
(GenBank) Cyclic nucleotide-binding protein
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pfb  Pseudomonas synxantha LBUM223
Pathway
pfb02020  Two-component system
pfb02024  Quorum sensing
pfb02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pfb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VO64_4666
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VO64_4666
   02025 Biofilm formation - Pseudomonas aeruginosa
    VO64_4666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pfb03000]
    VO64_4666
Transcription factors [BR:pfb03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    VO64_4666
SSDB
Motif
Pfam: cNMP_binding LpxB
Other DBs
NCBI-ProteinID: AKA85212
Position
complement(5212124..5212597)
AA seq 157 aa
MPQATLLNDEIRDMLMDCGLFDPLLPEDFHIAAGYFNISSIPQGEVIFLEGDAGTFMCIL
HTGQVAVQKTNHTGQRLTIATLRSGRAFGEMAVLDGERRSASCVAASDCVLLNLGKDALE
KMLNEAPRVAAKIIRAIAVALSKRLRMADGQLLSQQF
NT seq 474 nt   +upstreamnt  +downstreamnt
atgccacaagccacgttactcaacgacgaaatccgcgacatgctgatggactgcgggctg
tttgacccgttgctgcccgaagattttcatatcgccgcgggctacttcaatatcagcagc
attccccagggcgaggtgattttcctcgagggcgatgccggcacgttcatgtgcatcctc
cacactggccaggtggccgtgcagaaaaccaatcacaccggccagcgcctgaccatcgcc
accctgcgcagtggccgggcgtttggcgaaatggcggtgctcgacggcgagcggcgctcg
gccagttgcgtcgcggccagtgattgcgtgctgttgaacctgggcaaggacgccctggaa
aaaatgctcaatgaagcgccaagggtggcggccaagattatccgcgccattgccgtggcc
ctgtccaagcgcctgcgcatggccgatgggcaactgttatctcaacagttttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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