KEGG T02114: PflA506

Pseudomonas fluorescens A506: PflA506_0738

Entry

PflA506_0738      CDS       T02114

Symbol

phrB

Name

(GenBank) deoxyribodipyrimidine photolyase

K01669

deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]

Organism

pfc Pseudomonas fluorescens A506

Brite

KEGG Orthology (KO) [BR:pfc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfc03400]
    PflA506_0738 (phrB)
Enzymes [BR:pfc01000]
4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     PflA506_0738 (phrB)
DNA repair and recombination proteins [BR:pfc03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    PflA506_0738 (phrB)
Prokaryotic type
    PflA506_0738 (phrB)

SSDB

Motif

Pfam:

FAD_binding_7 DNA_photolyase Fer2_4

Other DBs

NCBI-ProteinID:

AFJ57573

Position

complement(848011..849453)

AA seq 480 aa
MHLIWLRTDLRLHDNTALAAASQRGPVAAVYLITPEQWQAHDDAPCKVDFWLRNLQHLSQ
ALDNLNIPLLIRHAATWDQAPTVLSQLCRELSVESVHVNEEYGIHESRRDSAVAQALEAD
GVTFHSYLDQLFFQPGSVLTKTGTYFQVFSQFRKVCYSRLHSALPRRVPTPKAQAEPGVK
SDPVPTAVEGFPTPSETLRALWPAGEDEARRRLDAFADQQISYYKDERDFPAKPGTSQLS
AYLAAGVVSPRQCLHAALQTNQGEFESGDIGAITWINELLWREFYKHILVGYPRVSRHRA
FRPETEALAWRKAPEDLAAWQQARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDGDGVFIK
RWLPELAALNKKQVHNPEAAGGLFGVADYPRAIVDLKQSRERALAAFRRLPSRQEMAEHE

NT seq 1443 nt +upstreamnt +downstreamnt
atgcatctgatctggttgcgcaccgacttgcgcctgcacgacaacactgccctggcggcc
gcgagccagcgcggccccgtcgcggctgtttacctgatcacacccgagcaatggcaggcg
catgatgacgcgccgtgcaaagtcgatttctggctgcgcaacttgcagcacctgagccag
gcactggacaacctcaacatccccctgttaatccgccacgccgcgacctgggaccaggcg
ccgacggtactgagccaactgtgccgcgagctgtcggtggagtcggtacacgtcaacgag
gaatacggcattcacgagagccgccgcgacagcgccgtggcccaggccctggaagctgac
ggcgtgaccttccacagctacctggaccaactgtttttccagccgggtagtgtgctgacc
aagaccggcacctacttccaggtgttcagccagttccgcaaggtctgctacagccgcctg
cacagcgccctgccccgcagggtgccgacgccaaaggcccaggcggagcctggcgtgaag
agcgaccctgtgccaacggcagtcgaagggttcccgacacccagcgaaaccttgcgtgcc
ctctggcccgctggcgaagacgaagcgcgccgtcgccttgatgccttcgccgatcagcag
atcagctattacaaggacgaacgcgacttcccggccaagcccggcaccagtcagctttct
gcctacctggccgccggagtggtttcgccgcgccagtgcttgcacgccgcgctgcaaacc
aaccagggcgagttcgaaagcggcgacatcggcgccatcacctggatcaacgagctgctg
tggcgcgagttctacaagcacatcctggtcggctacccacgggtttcccgccaccgcgcg
tttcgcccggaaaccgaagcgctggcctggcgcaaggcgcccgaagacctggccgcctgg
caacaggcgcgcaccggcttgccgatcatcgacgcggccatgcgccaactgctggaaacc
ggctggatgcacaaccgcctgcgcatggtggtggcgatgttcctgaccaaaaacctgctg
atcgactggcgcgaaggcgagcgcttcttcatgcgccacctgatcgacggtgatctggcg
gccaacaacggcggctggcagtggagttcgtccaccggcaccgactcggcgccgtatttc
cggatattcagcccgctgagccaatcggaaaaattcgacggcgacggcgtattcatcaaa
cgctggctcccggaactggccgcgctgaataaaaaacaagtgcacaaccccgaagcggct
ggcggcctgttcggcgtggcggattacccgcgtgccatcgtcgatttgaaacagtctcgc
gagcgcgccttggccgcatttcgccggctgccttcgcgtcaggagatggccgaacatgag
tga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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