KEGG T02114: PflA506

Pseudomonas fluorescens A506: PflA506_1794

Entry

PflA506_1794      CDS       T02114

Name

(GenBank) RNA pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

pfc Pseudomonas fluorescens A506

Brite

KEGG Orthology (KO) [BR:pfc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pfc03009]
    PflA506_1794
   03016 Transfer RNA biogenesis [BR:pfc03016]
    PflA506_1794
Enzymes [BR:pfc01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     PflA506_1794
    5.4.99.29  23S rRNA pseudouridine746 synthase
     PflA506_1794
Ribosome biogenesis [BR:pfc03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PflA506_1794
Transfer RNA biogenesis [BR:pfc03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    PflA506_1794

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

AFJ56119

Position

1960898..1961788

AA seq 296 aa
MSTLVFSPSQHQASTLYLPPGSWVTVLDCLCAHFPAIGREQWLDRIARGRVLDVNGNPIS
LGLGYKEGLCIYYFREVLNEKVIPVQENILYADEHLVVADKPHFLPVTPAGEYVEHTLLR
RLIRRLDNPALVPLHRIDRHTAGLVLFSANPHSRSAYQQLFPTRRIDKFYEAIAPALPHL
SFPLVHKSRLVDGEPFFRMQEGPGASNTETAVEVREKNADLWRYGLFPVTGKKHQLRVHM
TALGASICNDPFYPEVIKDAEDDYAKPLKLLAQGVRFIDPVSGEQRSFRSQITLDW

NT seq 891 nt +upstreamnt +downstreamnt
atgtccactttggttttttccccctcccagcaccaagccagcaccctgtacttgccgccg
ggctcctgggtgacagtgctcgattgcctgtgcgcacacttcccggccattggccgcgaa
cagtggctggaccgcattgcccgcggccgggtgctggatgtcaatggcaacccgatcagc
ctgggcctgggctacaaggaaggcctgtgcatctattactttcgcgaagtgctcaacgag
aaagtgattccggtgcaggaaaacatcctgtacgccgatgaacacctggtggtggcggac
aaaccgcatttcctgccagtgacacccgctggcgagtacgtcgaacacaccttgttgcga
cgcttgatccggcgcctggacaatcccgccctggtgcctctgcaccgcatcgaccggcat
acggcggggttggtgctgttctccgccaacccgcacagccgttcggcctatcagcaattg
tttccaacacgacgtatcgacaaattctacgaagccatcgcaccggccttgccgcacctc
agcttcccgttggtgcacaaaagccgtttggtggatggcgagcctttctttcgcatgcag
gaagggccgggggccagcaacaccgagacggcggtagaggtgcgcgagaaaaacgctgat
ctatggcgctacggcctgttcccggtgaccggtaagaagcaccagctgcgcgtgcatatg
acggcgctgggggcaagcatctgtaatgacccgttttaccccgaagtaatcaaggatgcc
gaggacgattacgccaagccacttaagctgctggcccagggcgtgcgctttatcgaccca
gtgagcggtgaacaacgcagcttccgcagccagatcaccctggactggtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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