KEGG   Pseudomonas fluorescens A506: PflA506_4668
Entry
PflA506_4668      CDS       T02114                                 
Name
(GenBank) exonuclease family protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pfc  Pseudomonas fluorescens A506
Pathway
pfc03030  DNA replication
pfc03430  Mismatch repair
pfc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pfc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PflA506_4668
   03430 Mismatch repair
    PflA506_4668
   03440 Homologous recombination
    PflA506_4668
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfc03032]
    PflA506_4668
   03400 DNA repair and recombination proteins [BR:pfc03400]
    PflA506_4668
Enzymes [BR:pfc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PflA506_4668
DNA replication proteins [BR:pfc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PflA506_4668
DNA repair and recombination proteins [BR:pfc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PflA506_4668
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 Ribosomal_L26
Other DBs
NCBI-ProteinID: AFJ57830
Position
complement(5153324..5153935)
AA seq 203 aa
MERIAVIDFETTGITPSSHCRATEIGVVILERGQIVDRYQSLMNAGVRIPAFIEQLTGIS
NAMLRSAPPAERVMNEVNEFVGTTPLMAHNAAFDQKFWDFELGLIRRTRLQKFACSLLLA
RRLMPAAPNHKLGTLNTYAKLPHTGQAHRALADAEMAANLTAHLARELRQTHGLRELSHD
LLCTLQKVPAAKINEHLKKHRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgcatagcggtcatcgactttgaaaccaccggcatcacccccagcagccactgc
cgggccacggagattggcgtggtcatccttgagcgcgggcaaatcgtggaccgctaccag
agcctgatgaatgctggcgtgcgcataccggcgtttatcgaacagctcaccggcatcagc
aacgccatgctgcgcagcgcgccaccggctgaacgggtgatgaacgaagtcaatgagttc
gtcggcaccacgcccttgatggcgcacaacgccgcgttcgaccagaagttctgggacttt
gagcttggcctgatccgccgcacccgcctgcaaaaatttgcctgctccctgctcctggct
cgccgcctgatgccggcggcgcccaaccacaagctcggcaccctcaacacctacgccaaa
ctgccccacaccggccaggctcaccgggcgctggcggatgcggaaatggccgccaacctc
accgcgcacctggcccgggaactgcgccagactcatggtttgcgcgagctgtcccatgac
ctgttgtgcacgttgcagaaagtgcctgccgcaaagatcaatgaacacctgaagaaacat
cgcgggttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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