KEGG   Pseudomonas fluorescens A506: PflA506_5276
Entry
PflA506_5276      CDS       T02114                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
pfc  Pseudomonas fluorescens A506
Pathway
pfc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pfc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PflA506_5276 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfc03021]
    PflA506_5276 (rpoZ)
   03400 DNA repair and recombination proteins [BR:pfc03400]
    PflA506_5276 (rpoZ)
Enzymes [BR:pfc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PflA506_5276 (rpoZ)
Transcription machinery [BR:pfc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     PflA506_5276 (rpoZ)
DNA repair and recombination proteins [BR:pfc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      PflA506_5276 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AFJ58271
Position
5773023..5773286
AA seq 87 aa
MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPLVQWENDKPTVVALREIAEGLMS
YEFIANAEIVEDEPLFAAFEGESNEDV
NT seq 264 nt   +upstreamnt  +downstreamnt
atggcccgcgtaaccgttgaagactgcctagaacacgtggataaccgctttgagctggtc
atgctctctaccaagcgtgcccgtcaactggccactggcggcaaagagcccctggtccag
tgggaaaacgacaagcctaccgttgtagccctgcgtgaaatcgctgaaggcctgatgagc
tacgagttcatcgccaacgccgaaatcgttgaagacgaaccgctgtttgcagcgttcgaa
ggcgagtccaacgaggacgtctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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